RNA–Protein interactions for RNA: ENST00000594107.1

XRCC1-203, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-203ENST00000594107 NPHP3Q7Z494 1330 aa13□□□□□ -0.33
XRCC1-203ENST00000594107 FOXO3O43524 673 aa13□□□□□ -0.33
XRCC1-203ENST00000594107 XPCQ01831 940 aaPredicted RBP13□□□□□ -0.33
XRCC1-203ENST00000594107 KIF1BO60333 1816 aa12.99□□□□□ -0.33
XRCC1-203ENST00000594107 SF3B2Q13435 895 aaKnown RBP12.99□□□□□ -0.33
XRCC1-203ENST00000594107 DEFB132Q7Z7B7 95 aa12.99□□□□□ -0.33
XRCC1-203ENST00000594107 BLMP54132 1417 aaPredicted RBP12.98□□□□□ -0.33
XRCC1-203ENST00000594107 UNC5CLQ8IV45 518 aa12.98□□□□□ -0.33
XRCC1-203ENST00000594107 MYOM2P54296 1465 aa12.97□□□□□ -0.33
XRCC1-203ENST00000594107 CLTCL1P53675 1640 aa12.97□□□□□ -0.33
XRCC1-203ENST00000594107 NUTM2FA1L443 756 aa12.96□□□□□ -0.33
XRCC1-203ENST00000594107 BRWD3Q6RI45 1802 aa12.96□□□□□ -0.33
XRCC1-203ENST00000594107 HFM1A2PYH4 1435 aa12.96□□□□□ -0.34
XRCC1-203ENST00000594107 LRPPRCP42704 1394 aaKnown RBP12.94□□□□□ -0.34
XRCC1-203ENST00000594107 RALGAPBQ86X10 1494 aa12.94□□□□□ -0.34
XRCC1-203ENST00000594107 PXDNQ92626 1479 aa12.94□□□□□ -0.34
XRCC1-203ENST00000594107 SEPT12Q8IYM1 358 aa12.94□□□□□ -0.34
XRCC1-203ENST00000594107 GLI3P10071 1580 aa12.94□□□□□ -0.34
XRCC1-203ENST00000594107 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.93□□□□□ -0.34
XRCC1-203ENST00000594107 RPGRIP1LQ68CZ1 1315 aa12.92□□□□□ -0.34
XRCC1-203ENST00000594107 HAP1P54257 671 aaPredicted RBP12.92□□□□□ -0.34
XRCC1-203ENST00000594107 CCDC9Q9Y3X0 531 aaKnown RBP12.92□□□□□ -0.34
XRCC1-203ENST00000594107 SLIT2O94813 1529 aa12.92□□□□□ -0.34
XRCC1-203ENST00000594107 SPATA31A3Q5VYP0 1347 aa12.91□□□□□ -0.34
XRCC1-203ENST00000594107 PSDA5PKW4 1024 aaPredicted RBP12.91□□□□□ -0.34
XRCC1-203ENST00000594107 KRT28Q7Z3Y7 464 aa12.91□□□□□ -0.34
XRCC1-203ENST00000594107 WAPLQ7Z5K2 1190 aa12.91□□□□□ -0.34
XRCC1-203ENST00000594107 STK26Q9P289 416 aa12.91□□□□□ -0.34
XRCC1-203ENST00000594107 PLEKHG5O94827 1062 aa12.9□□□□□ -0.34
XRCC1-203ENST00000594107 VPS72Q15906 364 aa12.9□□□□□ -0.34
XRCC1-203ENST00000594107 KRT27Q7Z3Y8 459 aa12.9□□□□□ -0.34
XRCC1-203ENST00000594107 LRP5O75197 1615 aa12.9□□□□□ -0.34
XRCC1-203ENST00000594107 PRAG1Q86YV5 1406 aa12.89□□□□□ -0.35
XRCC1-203ENST00000594107 ONECUT3O60422 494 aaPredicted RBP12.89□□□□□ -0.35
XRCC1-203ENST00000594107 HRCP23327 699 aa12.89□□□□□ -0.35
XRCC1-203ENST00000594107 BAG6P46379 1132 aa12.89□□□□□ -0.35
XRCC1-203ENST00000594107 CDC42BPGQ6DT37 1551 aa12.89□□□□□ -0.35
XRCC1-203ENST00000594107 NAIPQ13075 1403 aa12.88□□□□□ -0.35
XRCC1-203ENST00000594107 PPARGC1BQ86YN6 1023 aaKnown RBP12.88□□□□□ -0.35
XRCC1-203ENST00000594107 CABLES1Q8TDN4 633 aa12.88□□□□□ -0.35
XRCC1-203ENST00000594107 PPLO60437 1756 aa12.87□□□□□ -0.35
XRCC1-203ENST00000594107 A0A0G2JS52 829 aa12.87□□□□□ -0.35
XRCC1-203ENST00000594107 MYT1Q01538 1121 aa12.87□□□□□ -0.35
XRCC1-203ENST00000594107 PSME1Q06323 249 aa12.86□□□□□ -0.35
XRCC1-203ENST00000594107 LMOD2Q6P5Q4 547 aa12.86□□□□□ -0.35
XRCC1-203ENST00000594107 USP32Q8NFA0 1604 aa12.86□□□□□ -0.35
XRCC1-203ENST00000594107 EN1Q05925 392 aaPredicted RBP12.85□□□□□ -0.35
XRCC1-203ENST00000594107 TMEM132EQ6IEE7 984 aa12.85□□□□□ -0.35
XRCC1-203ENST00000594107 SLC4A1APQ9BWU0 796 aaKnown RBP12.84□□□□□ -0.35
XRCC1-203ENST00000594107 ADGRF5Q8IZF2 1346 aa12.84□□□□□ -0.35
XRCC1-203ENST00000594107 RGPD8O14715 1765 aaPredicted RBP12.84□□□□□ -0.35
XRCC1-203ENST00000594107 CCDC144AA2RUR9 1427 aa12.83□□□□□ -0.36
XRCC1-203ENST00000594107 FAM83GA6ND36 823 aa12.83□□□□□ -0.36
XRCC1-203ENST00000594107 R3HDM1Q15032 1099 aaKnown RBP12.83□□□□□ -0.36
XRCC1-203ENST00000594107 FAM98CQ17RN3 349 aaKnown RBP12.83□□□□□ -0.36
XRCC1-203ENST00000594107 RGL3Q3MIN7 710 aa12.83□□□□□ -0.36
XRCC1-203ENST00000594107 PHF8Q9UPP1 1060 aa12.83□□□□□ -0.36
XRCC1-203ENST00000594107 KIF1AQ12756 1690 aa12.83□□□□□ -0.36
XRCC1-203ENST00000594107 PLCH1Q4KWH8 1693 aa12.83□□□□□ -0.36
XRCC1-203ENST00000594107 PLEKHH1Q9ULM0 1364 aa12.82□□□□□ -0.36
XRCC1-203ENST00000594107 FMN2Q9NZ56 1722 aa12.82□□□□□ -0.36
XRCC1-203ENST00000594107 NWD2Q9ULI1 1742 aa12.82□□□□□ -0.36
XRCC1-203ENST00000594107 ABCC11Q96J66 1382 aa12.81□□□□□ -0.36
XRCC1-203ENST00000594107 SRCAPQ6ZRS2 3230 aa12.81□□□□□ -0.36
XRCC1-203ENST00000594107 FAM182BQ5T319 152 aa12.81□□□□□ -0.36
XRCC1-203ENST00000594107 TNS3Q68CZ2 1445 aa12.8□□□□□ -0.36
XRCC1-203ENST00000594107 EP400Q96L91 3159 aa12.8□□□□□ -0.36
XRCC1-203ENST00000594107 BTG4Q9NY30 223 aa12.8□□□□□ -0.36
XRCC1-203ENST00000594107 TECPR2O15040 1411 aa12.79□□□□□ -0.36
XRCC1-203ENST00000594107 EZH2Q15910 746 aaKnown RBP12.78□□□□□ -0.36
XRCC1-203ENST00000594107 SIRT1Q96EB6 747 aa12.78□□□□□ -0.36
XRCC1-203ENST00000594107 RGPD1P0DJD0 1748 aa12.78□□□□□ -0.36
XRCC1-203ENST00000594107 SBNO1A3KN83 1393 aa12.78□□□□□ -0.36
XRCC1-203ENST00000594107 RRBP1Q9P2E9 1410 aaKnown RBP12.78□□□□□ -0.36
XRCC1-203ENST00000594107 PMFBP1Q8TBY8 1022 aa12.77□□□□□ -0.37
XRCC1-203ENST00000594107 ARHGEF10O15013 1369 aa12.77□□□□□ -0.37
XRCC1-203ENST00000594107 YTHDC2Q9H6S0 1430 aaKnown RBP12.77□□□□□ -0.37
XRCC1-203ENST00000594107 KNDC1Q76NI1 1749 aa12.76□□□□□ -0.37
XRCC1-203ENST00000594107 ABCA3Q99758 1704 aa12.76□□□□□ -0.37
XRCC1-203ENST00000594107 ANKRD30BQ9BXX2 1392 aa12.76□□□□□ -0.37
XRCC1-203ENST00000594107 IFT172Q9UG01 1749 aa12.76□□□□□ -0.37
XRCC1-203ENST00000594107 YY1P25490 414 aa12.75□□□□□ -0.37
XRCC1-203ENST00000594107 SAFB2Q14151 953 aaKnown RBP eCLIP12.75□□□□□ -0.37
XRCC1-203ENST00000594107 NRXN1Q9ULB1 1477 aa12.74□□□□□ -0.37
XRCC1-203ENST00000594107 NRAPQ86VF7 1730 aa12.74□□□□□ -0.37
XRCC1-203ENST00000594107 SPATA31A5Q5VU36 1347 aa12.73□□□□□ -0.37
XRCC1-203ENST00000594107 SPATA31A7Q8IWB4 1347 aa12.73□□□□□ -0.37
XRCC1-203ENST00000594107 TRIM37O94972 964 aa12.73□□□□□ -0.37
XRCC1-203ENST00000594107 CAMKK2Q96RR4 588 aa12.73□□□□□ -0.37
XRCC1-203ENST00000594107 C14orf93Q9H972 538 aaKnown RBP12.73□□□□□ -0.37
XRCC1-203ENST00000594107 DHX57Q6P158 1386 aaKnown RBP12.72□□□□□ -0.37
XRCC1-203ENST00000594107 COL14A1Q05707 1796 aaKnown RBP12.72□□□□□ -0.37
XRCC1-203ENST00000594107 APBA3O96018 575 aa12.72□□□□□ -0.37
XRCC1-203ENST00000594107 PRAM1Q96QH2 718 aa12.72□□□□□ -0.37
XRCC1-203ENST00000594107 SPATA31E1Q6ZUB1 1445 aa12.71□□□□□ -0.37
XRCC1-203ENST00000594107 CFAP70Q5T0N1 1121 aa12.71□□□□□ -0.37
XRCC1-203ENST00000594107 FAM196AQ6ZSG2 479 aa12.71□□□□□ -0.37
XRCC1-203ENST00000594107 POGKQ9P215 609 aa12.71□□□□□ -0.37
XRCC1-203ENST00000594107 TNS1Q9HBL0 1735 aaKnown RBP12.71□□□□□ -0.38
XRCC1-203ENST00000594107 DISP2A7MBM2 1401 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms