RNA–Protein interactions for RNA: ENST00000594107.1

XRCC1-203, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-203ENST00000594107 NISCHQ9Y2I1 1504 aa21.67■■□□□ 1.06
XRCC1-203ENST00000594107 ABCC9O60706 1549 aa20■□□□□ 0.79
XRCC1-203ENST00000594107 CCDC180Q9P1Z9 1646 aa19.58■□□□□ 0.72
XRCC1-203ENST00000594107 DNAJC5BQ9UF47 199 aa19.13■□□□□ 0.65
XRCC1-203ENST00000594107 RB1CC1Q8TDY2 1594 aa18.85■□□□□ 0.61
XRCC1-203ENST00000594107 DCAF8L2P0C7V8 631 aa18.62■□□□□ 0.57
XRCC1-203ENST00000594107 NACADO15069 1562 aa18.61■□□□□ 0.57
XRCC1-203ENST00000594107 PABPN1Q86U42 306 aaKnown RBP eCLIP18.61■□□□□ 0.57
XRCC1-203ENST00000594107 UNC13AQ9UPW8 1703 aa18.44■□□□□ 0.54
XRCC1-203ENST00000594107 BICRAQ9NZM4 1560 aa18.3■□□□□ 0.52
XRCC1-203ENST00000594107 MYO15BQ96JP2 1530 aa18.19■□□□□ 0.5
XRCC1-203ENST00000594107 CECR2Q9BXF3 1484 aa18.04■□□□□ 0.48
XRCC1-203ENST00000594107 CC2D2AQ9P2K1 1620 aa18.03■□□□□ 0.48
XRCC1-203ENST00000594107 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
XRCC1-203ENST00000594107 EIF4G1Q04637 1599 aaKnown RBP17.87■□□□□ 0.45
XRCC1-203ENST00000594107 SCRIBQ14160 1630 aa17.84■□□□□ 0.45
XRCC1-203ENST00000594107 ZCCHC6Q5VYS8 1495 aaKnown RBP17.84■□□□□ 0.45
XRCC1-203ENST00000594107 DCAF1Q9Y4B6 1507 aa17.83■□□□□ 0.45
XRCC1-203ENST00000594107 DNAJC5Q9H3Z4 198 aa17.83■□□□□ 0.44
XRCC1-203ENST00000594107 CUX2O14529 1486 aa17.34■□□□□ 0.37
XRCC1-203ENST00000594107 ERCC6Q03468 1493 aa17.29■□□□□ 0.36
XRCC1-203ENST00000594107 NCAPD3P42695 1498 aa17.2■□□□□ 0.34
XRCC1-203ENST00000594107 ATAD2BQ9ULI0 1458 aa17.09■□□□□ 0.33
XRCC1-203ENST00000594107 NESP48681 1621 aa17.07■□□□□ 0.32
XRCC1-203ENST00000594107 SMARCA2P51531 1590 aa17.02■□□□□ 0.31
XRCC1-203ENST00000594107 HMGXB3Q12766 1538 aa17■□□□□ 0.31
XRCC1-203ENST00000594107 SMARCA4P51532 1647 aa16.97■□□□□ 0.31
XRCC1-203ENST00000594107 TRIM41Q8WV44 630 aa16.94■□□□□ 0.3
XRCC1-203ENST00000594107 THOC2Q8NI27 1593 aaKnown RBP16.91■□□□□ 0.3
XRCC1-203ENST00000594107 BAZ1BQ9UIG0 1483 aaKnown RBP16.91■□□□□ 0.3
XRCC1-203ENST00000594107 LAMC3Q9Y6N6 1575 aa16.86■□□□□ 0.29
XRCC1-203ENST00000594107 BAZ1AQ9NRL2 1556 aaPredicted RBP16.84■□□□□ 0.29
XRCC1-203ENST00000594107 KIF21AQ7Z4S6 1674 aa16.84■□□□□ 0.29
XRCC1-203ENST00000594107 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
XRCC1-203ENST00000594107 PEG3Q9GZU2 1588 aa16.78■□□□□ 0.28
XRCC1-203ENST00000594107 MROH2BQ7Z745 1585 aa16.7■□□□□ 0.26
XRCC1-203ENST00000594107 CADPSQ9ULU8 1353 aa16.67■□□□□ 0.26
XRCC1-203ENST00000594107 MRC2Q9UBG0 1479 aa16.65■□□□□ 0.26
XRCC1-203ENST00000594107 WDR62O43379 1518 aa16.6■□□□□ 0.25
XRCC1-203ENST00000594107 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
XRCC1-203ENST00000594107 CEP164Q9UPV0 1460 aa16.52■□□□□ 0.23
XRCC1-203ENST00000594107 WIZO95785 1651 aa16.51■□□□□ 0.23
XRCC1-203ENST00000594107 FANCD2Q9BXW9 1451 aa16.48■□□□□ 0.23
XRCC1-203ENST00000594107 CFTRP13569 1480 aa16.38■□□□□ 0.21
XRCC1-203ENST00000594107 URB2Q14146 1524 aaKnown RBP16.35■□□□□ 0.21
XRCC1-203ENST00000594107 RIMBP3CA6NJZ7 1639 aa16.34■□□□□ 0.21
XRCC1-203ENST00000594107 RIMBP3BA6NNM3 1639 aa16.34■□□□□ 0.21
XRCC1-203ENST00000594107 RIMBP3Q9UFD9 1639 aa16.34■□□□□ 0.21
XRCC1-203ENST00000594107 CYB5RLQ6IPT4 315 aa16.24■□□□□ 0.19
XRCC1-203ENST00000594107 ARHGEF11O15085 1522 aa16.24■□□□□ 0.19
XRCC1-203ENST00000594107 RSF1Q96T23 1441 aaPredicted RBP16.22■□□□□ 0.19
XRCC1-203ENST00000594107 TOP2AP11388 1531 aaKnown RBP16.22■□□□□ 0.19
XRCC1-203ENST00000594107 ZNF608Q9ULD9 1512 aaPredicted RBP16.22■□□□□ 0.19
XRCC1-203ENST00000594107 TRHP20396 242 aaPredicted RBP16.2■□□□□ 0.18
XRCC1-203ENST00000594107 IFT140Q96RY7 1462 aa16.2■□□□□ 0.18
XRCC1-203ENST00000594107 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
XRCC1-203ENST00000594107 TOPBP1Q92547 1522 aa16.12■□□□□ 0.17
XRCC1-203ENST00000594107 FBLN2P98095 1184 aa16.1■□□□□ 0.17
XRCC1-203ENST00000594107 CCDC88BA6NC98 1476 aa16.09■□□□□ 0.17
XRCC1-203ENST00000594107 EIF4G3O43432 1585 aaKnown RBP16.09■□□□□ 0.17
XRCC1-203ENST00000594107 ABCC8Q09428 1581 aa16.08■□□□□ 0.16
XRCC1-203ENST00000594107 CHD1O14646 1710 aa16.08■□□□□ 0.16
XRCC1-203ENST00000594107 AQRO60306 1485 aaKnown RBP eCLIP16.06■□□□□ 0.166e-6■■■■□ 25.1
XRCC1-203ENST00000594107 ARAP1Q96P48 1450 aa16.03■□□□□ 0.16
XRCC1-203ENST00000594107 DNMBPQ6XZF7 1577 aa16.01■□□□□ 0.15
XRCC1-203ENST00000594107 AEBP2Q6ZN18 517 aaPredicted RBP16.01■□□□□ 0.15
XRCC1-203ENST00000594107 TARBP1Q13395 1621 aaKnown RBP16■□□□□ 0.15
XRCC1-203ENST00000594107 POLA1P09884 1462 aaPredicted RBP15.92■□□□□ 0.14
XRCC1-203ENST00000594107 TDRD9Q8NDG6 1382 aaKnown RBP15.92■□□□□ 0.14
XRCC1-203ENST00000594107 RAD54L2Q9Y4B4 1467 aa15.91■□□□□ 0.14
XRCC1-203ENST00000594107 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
XRCC1-203ENST00000594107 SOGA1O94964 1423 aa15.89■□□□□ 0.13
XRCC1-203ENST00000594107 SNAPC4Q5SXM2 1469 aa15.84■□□□□ 0.13
XRCC1-203ENST00000594107 CLASP1Q7Z460 1538 aa15.84■□□□□ 0.13
XRCC1-203ENST00000594107 SYNJ1O43426 1573 aa15.82■□□□□ 0.12
XRCC1-203ENST00000594107 FGD5Q6ZNL6 1462 aa15.78■□□□□ 0.12
XRCC1-203ENST00000594107 MAGI1Q96QZ7 1491 aaPredicted RBP15.78■□□□□ 0.12
XRCC1-203ENST00000594107 WDR97A6NE52 1622 aa15.77■□□□□ 0.12
XRCC1-203ENST00000594107 GRIN2BQ13224 1484 aa15.76■□□□□ 0.11
XRCC1-203ENST00000594107 SYNJ2O15056 1496 aa15.74■□□□□ 0.11
XRCC1-203ENST00000594107 GAPVD1Q14C86 1478 aa15.74■□□□□ 0.11
XRCC1-203ENST00000594107 CUX1P39880 1505 aa15.69■□□□□ 0.1
XRCC1-203ENST00000594107 PBRM1Q86U86 1689 aa15.67■□□□□ 0.1
XRCC1-203ENST00000594107 ERCC6L2Q5T890 1561 aa15.6■□□□□ 0.09
XRCC1-203ENST00000594107 ABCA10Q8WWZ4 1543 aa15.56■□□□□ 0.08
XRCC1-203ENST00000594107 ABCA5Q8WWZ7 1642 aa15.56■□□□□ 0.08
XRCC1-203ENST00000594107 GRIN2AQ12879 1464 aa15.55■□□□□ 0.08
XRCC1-203ENST00000594107 CEP170Q5SW79 1584 aa15.54■□□□□ 0.08
XRCC1-203ENST00000594107 KIF13AQ9H1H9 1805 aa15.51■□□□□ 0.07
XRCC1-203ENST00000594107 NUP160Q12769 1436 aa15.5■□□□□ 0.07
XRCC1-203ENST00000594107 SHROOM2Q13796 1616 aa15.47■□□□□ 0.07
XRCC1-203ENST00000594107 WRNQ14191 1432 aaPredicted RBP eCLIP15.46■□□□□ 0.07
XRCC1-203ENST00000594107 ADAMTS12P58397 1594 aa15.45■□□□□ 0.06
XRCC1-203ENST00000594107 FHAD1B1AJZ9 1412 aa15.44■□□□□ 0.06
XRCC1-203ENST00000594107 FAM69CQ0P6D2 419 aa15.44■□□□□ 0.06
XRCC1-203ENST00000594107 PRG4Q92954 1404 aaPredicted RBP15.43■□□□□ 0.06
XRCC1-203ENST00000594107 NPM1P06748 294 aaKnown RBP eCLIP15.43■□□□□ 0.06
XRCC1-203ENST00000594107 JPH4Q96JJ6 628 aa15.43■□□□□ 0.06
XRCC1-203ENST00000594107 ABCC10Q5T3U5 1492 aa15.37■□□□□ 0.05
XRCC1-203ENST00000594107 ERICH3Q5RHP9 1530 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms