RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 YTHDC2Q9H6S0 1430 aaKnown RBP19.65■□□□□ 0.74
APOC1-209ENST00000592885 COL22A1Q8NFW1 1626 aaPredicted RBP19.65■□□□□ 0.74
APOC1-209ENST00000592885 FMN2Q9NZ56 1722 aa19.63■□□□□ 0.73
APOC1-209ENST00000592885 CDK12Q9NYV4 1490 aaPredicted RBP19.62■□□□□ 0.73
APOC1-209ENST00000592885 NUTM2BA6NNL0 878 aaPredicted RBP19.62■□□□□ 0.73
APOC1-209ENST00000592885 NUTM2EB1AL46 878 aaPredicted RBP19.62■□□□□ 0.73
APOC1-209ENST00000592885 NUTM2AQ8IVF1 878 aaPredicted RBP19.62■□□□□ 0.73
APOC1-209ENST00000592885 DDX17Q92841 729 aaKnown RBP19.62■□□□□ 0.73
APOC1-209ENST00000592885 KIF1AQ12756 1690 aa19.62■□□□□ 0.73
APOC1-209ENST00000592885 SIRT1Q96EB6 747 aa19.61■□□□□ 0.73
APOC1-209ENST00000592885 ORAI2Q96SN7 254 aa19.61■□□□□ 0.73
APOC1-209ENST00000592885 NPHP3Q7Z494 1330 aa19.6■□□□□ 0.73
APOC1-209ENST00000592885 HRCP23327 699 aa19.59■□□□□ 0.73
APOC1-209ENST00000592885 C14orf93Q9H972 538 aaKnown RBP19.59■□□□□ 0.73
APOC1-209ENST00000592885 STK26Q9P289 416 aa19.59■□□□□ 0.73
APOC1-209ENST00000592885 DLC1Q96QB1 1528 aa19.59■□□□□ 0.73
APOC1-209ENST00000592885 PXDNQ92626 1479 aa19.59■□□□□ 0.73
APOC1-209ENST00000592885 AFF2P51816 1311 aa19.58■□□□□ 0.73
APOC1-209ENST00000592885 DHX57Q6P158 1386 aaKnown RBP19.57■□□□□ 0.72
APOC1-209ENST00000592885 TMEM132EQ6IEE7 984 aa19.57■□□□□ 0.72
APOC1-209ENST00000592885 PLEKHH1Q9ULM0 1364 aa19.57■□□□□ 0.72
APOC1-209ENST00000592885 ESCO1Q5FWF5 840 aa19.56■□□□□ 0.72
APOC1-209ENST00000592885 WAPLQ7Z5K2 1190 aa19.56■□□□□ 0.72
APOC1-209ENST00000592885 RXRBP28702 533 aa19.55■□□□□ 0.72
APOC1-209ENST00000592885 ADGRB2O60241 1585 aa19.54■□□□□ 0.72
APOC1-209ENST00000592885 C8orf37Q96NL8 207 aa19.54■□□□□ 0.72
APOC1-209ENST00000592885 MARF1Q9Y4F3 1742 aaKnown RBP19.54■□□□□ 0.72
APOC1-209ENST00000592885 ADGRB1O14514 1584 aa19.53■□□□□ 0.72
APOC1-209ENST00000592885 STAC3Q96MF2 364 aa19.53■□□□□ 0.72
APOC1-209ENST00000592885 CFAP70Q5T0N1 1121 aa19.52■□□□□ 0.72
APOC1-209ENST00000592885 ANKARQ7Z5J8 1434 aa19.49■□□□□ 0.71
APOC1-209ENST00000592885 RGPD8O14715 1765 aaPredicted RBP19.48■□□□□ 0.71
APOC1-209ENST00000592885 FOXO3O43524 673 aa19.48■□□□□ 0.71
APOC1-209ENST00000592885 ADAMTS2O95450 1211 aa19.48■□□□□ 0.71
APOC1-209ENST00000592885 RBM6P78332 1123 aaKnown RBP19.48■□□□□ 0.71
APOC1-209ENST00000592885 NGLY1Q96IV0 654 aa19.48■□□□□ 0.71
APOC1-209ENST00000592885 RGS12O14924 1447 aa19.47■□□□□ 0.71
APOC1-209ENST00000592885 PRAM1Q96QH2 718 aa19.46■□□□□ 0.71
APOC1-209ENST00000592885 QTRT2Q9H974 415 aaKnown RBP19.46■□□□□ 0.71
APOC1-209ENST00000592885 EIF3AQ14152 1382 aaKnown RBP19.45■□□□□ 0.7
APOC1-209ENST00000592885 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.45■□□□□ 0.7
APOC1-209ENST00000592885 NUTM2FA1L443 756 aa19.45■□□□□ 0.7
APOC1-209ENST00000592885 FNBP4Q8N3X1 1017 aaPredicted RBP19.45■□□□□ 0.7
APOC1-209ENST00000592885 USP32Q8NFA0 1604 aa19.44■□□□□ 0.7
APOC1-209ENST00000592885 SPATA31A3Q5VYP0 1347 aa19.44■□□□□ 0.7
APOC1-209ENST00000592885 ATRNO75882 1429 aa19.43■□□□□ 0.7
APOC1-209ENST00000592885 TNS3Q68CZ2 1445 aa19.43■□□□□ 0.7
APOC1-209ENST00000592885 POGKQ9P215 609 aa19.43■□□□□ 0.7
APOC1-209ENST00000592885 USP21Q9UK80 565 aa19.43■□□□□ 0.7
APOC1-209ENST00000592885 TRPC5Q9UL62 973 aaPredicted RBP19.43■□□□□ 0.7
APOC1-209ENST00000592885 KIAA1210Q9ULL0 1709 aa19.42■□□□□ 0.7
APOC1-209ENST00000592885 XPCQ01831 940 aaPredicted RBP19.42■□□□□ 0.7
APOC1-209ENST00000592885 DCAF11Q8TEB1 546 aa19.42■□□□□ 0.7
APOC1-209ENST00000592885 UPF1Q92900 1129 aaKnown RBP eCLIP19.42■□□□□ 0.7
APOC1-209ENST00000592885 PHF8Q9UPP1 1060 aa19.42■□□□□ 0.7
APOC1-209ENST00000592885 ARHGEF28Q8N1W1 1705 aaKnown RBP19.42■□□□□ 0.7
APOC1-209ENST00000592885 TULP4Q9NRJ4 1543 aa19.41■□□□□ 0.7
APOC1-209ENST00000592885 SBNO1A3KN83 1393 aa19.41■□□□□ 0.7
APOC1-209ENST00000592885 ABCA3Q99758 1704 aa19.4■□□□□ 0.7
APOC1-209ENST00000592885 PSME1Q06323 249 aa19.4■□□□□ 0.7
APOC1-209ENST00000592885 KRT28Q7Z3Y7 464 aa19.39■□□□□ 0.69
APOC1-209ENST00000592885 ARHGEF10O15013 1369 aa19.38■□□□□ 0.69
APOC1-209ENST00000592885 SAFB2Q14151 953 aaKnown RBP eCLIP19.38■□□□□ 0.69
APOC1-209ENST00000592885 ITSN1Q15811 1721 aa19.38■□□□□ 0.69
APOC1-209ENST00000592885 BCL9LQ86UU0 1499 aa19.38■□□□□ 0.69
APOC1-209ENST00000592885 KDM2AQ9Y2K7 1162 aa19.38■□□□□ 0.69
APOC1-209ENST00000592885 TRPM3Q9HCF6 1732 aaPredicted RBP19.37■□□□□ 0.69
APOC1-209ENST00000592885 TRAK1Q9UPV9 953 aa19.37■□□□□ 0.69
APOC1-209ENST00000592885 SLIT2O94813 1529 aa19.36■□□□□ 0.69
APOC1-209ENST00000592885 NWD2Q9ULI1 1742 aa19.36■□□□□ 0.69
APOC1-209ENST00000592885 ATAD2Q6PL18 1390 aa19.34■□□□□ 0.69
APOC1-209ENST00000592885 PLCH1Q4KWH8 1693 aa19.34■□□□□ 0.69
APOC1-209ENST00000592885 ALS2Q96Q42 1657 aa19.34■□□□□ 0.69
APOC1-209ENST00000592885 MINK1Q8N4C8 1332 aaPredicted RBP19.32■□□□□ 0.68
APOC1-209ENST00000592885 WASLO00401 505 aaPredicted RBP19.32■□□□□ 0.68
APOC1-209ENST00000592885 GPRASP1Q5JY77 1395 aa19.32■□□□□ 0.68
APOC1-209ENST00000592885 ATP7BP35670 1465 aa19.3■□□□□ 0.68
APOC1-209ENST00000592885 UNC5CLQ8IV45 518 aa19.3■□□□□ 0.68
APOC1-209ENST00000592885 HIRIP3Q9BW71 556 aaPredicted RBP19.3■□□□□ 0.68
APOC1-209ENST00000592885 GLI3P10071 1580 aa19.3■□□□□ 0.68
APOC1-209ENST00000592885 TOPAZ1Q8N9V7 1692 aa19.3■□□□□ 0.68
APOC1-209ENST00000592885 PRR36Q9H6K5 1346 aa19.29■□□□□ 0.68
APOC1-209ENST00000592885 HAP1P54257 671 aaPredicted RBP19.29■□□□□ 0.68
APOC1-209ENST00000592885 GJD4Q96KN9 370 aaPredicted RBP19.29■□□□□ 0.68
APOC1-209ENST00000592885 CRYBG1Q9Y4K1 1723 aa19.28■□□□□ 0.68
APOC1-209ENST00000592885 PMFBP1Q8TBY8 1022 aa19.28■□□□□ 0.68
APOC1-209ENST00000592885 RALGAPBQ86X10 1494 aa19.28■□□□□ 0.68
APOC1-209ENST00000592885 NRAPQ86VF7 1730 aa19.25■□□□□ 0.67
APOC1-209ENST00000592885 COL14A1Q05707 1796 aaKnown RBP19.25■□□□□ 0.67
APOC1-209ENST00000592885 LMOD2Q6P5Q4 547 aa19.25■□□□□ 0.67
APOC1-209ENST00000592885 CABLES1Q8TDN4 633 aa19.23■□□□□ 0.67
APOC1-209ENST00000592885 VPS72Q15906 364 aa19.22■□□□□ 0.67
APOC1-209ENST00000592885 NGDNQ8NEJ9 315 aaKnown RBP19.22■□□□□ 0.67
APOC1-209ENST00000592885 NUDT16Q96DE0 195 aaKnown RBP19.21■□□□□ 0.67
APOC1-209ENST00000592885 POLR3AO14802 1390 aaPredicted RBP19.2■□□□□ 0.66
APOC1-209ENST00000592885 CCDC125Q86Z20 511 aa19.2■□□□□ 0.66
APOC1-209ENST00000592885 PHRF1Q9P1Y6 1649 aaKnown RBP19.2■□□□□ 0.66
APOC1-209ENST00000592885 BRWD3Q6RI45 1802 aa19.2■□□□□ 0.66
APOC1-209ENST00000592885 QRICH2Q9H0J4 1663 aa19.2■□□□□ 0.66
APOC1-209ENST00000592885 TRPM1Q7Z4N2 1603 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms