RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 PRAG1Q86YV5 1406 aa29.69■■■□□ 2.34
PRKCSH-216ENST00000592445 NPHP3Q7Z494 1330 aa29.69■■■□□ 2.34
PRKCSH-216ENST00000592445 NAIPQ13075 1403 aa29.68■■■□□ 2.34
PRKCSH-216ENST00000592445 ZRANB1Q9UGI0 708 aa29.67■■■□□ 2.34
PRKCSH-216ENST00000592445 COL22A1Q8NFW1 1626 aaPredicted RBP29.67■■■□□ 2.34
PRKCSH-216ENST00000592445 MYOM2P54296 1465 aa29.63■■■□□ 2.33
PRKCSH-216ENST00000592445 XPCQ01831 940 aaPredicted RBP29.63■■■□□ 2.33
PRKCSH-216ENST00000592445 FOXO3O43524 673 aa29.62■■■□□ 2.33
PRKCSH-216ENST00000592445 SLC4A1APQ9BWU0 796 aaKnown RBP29.62■■■□□ 2.33
PRKCSH-216ENST00000592445 EP400Q96L91 3159 aa29.62■■■□□ 2.33
PRKCSH-216ENST00000592445 BCL9LQ86UU0 1499 aa29.61■■■□□ 2.33
PRKCSH-216ENST00000592445 CCDC125Q86Z20 511 aa29.6■■■□□ 2.33
PRKCSH-216ENST00000592445 CDC42BPGQ6DT37 1551 aa29.6■■■□□ 2.33
PRKCSH-216ENST00000592445 PXDNQ92626 1479 aa29.59■■■□□ 2.33
PRKCSH-216ENST00000592445 PPLO60437 1756 aa29.58■■■□□ 2.33
PRKCSH-216ENST00000592445 LRPPRCP42704 1394 aaKnown RBP29.58■■■□□ 2.33
PRKCSH-216ENST00000592445 GJD4Q96KN9 370 aaPredicted RBP29.58■■■□□ 2.33
PRKCSH-216ENST00000592445 RRBP1Q9P2E9 1410 aaKnown RBP29.57■■■□□ 2.32
PRKCSH-216ENST00000592445 NUTM2FA1L443 756 aa29.57■■■□□ 2.32
PRKCSH-216ENST00000592445 STK26Q9P289 416 aa29.56■■■□□ 2.32
PRKCSH-216ENST00000592445 WAPLQ7Z5K2 1190 aa29.53■■■□□ 2.32
PRKCSH-216ENST00000592445 MARF1Q9Y4F3 1742 aaKnown RBP29.53■■■□□ 2.32
PRKCSH-216ENST00000592445 ADGRF5Q8IZF2 1346 aa29.51■■■□□ 2.32
PRKCSH-216ENST00000592445 UNC5CLQ8IV45 518 aa29.49■■■□□ 2.31
PRKCSH-216ENST00000592445 RGL3Q3MIN7 710 aa29.48■■■□□ 2.31
PRKCSH-216ENST00000592445 TECPR2O15040 1411 aa29.45■■■□□ 2.31
PRKCSH-216ENST00000592445 TMEM132EQ6IEE7 984 aa29.45■■■□□ 2.31
PRKCSH-216ENST00000592445 SPATA31A3Q5VYP0 1347 aa29.45■■■□□ 2.3
PRKCSH-216ENST00000592445 RALGAPBQ86X10 1494 aa29.44■■■□□ 2.3
PRKCSH-216ENST00000592445 CCDC144AA2RUR9 1427 aa29.44■■■□□ 2.3
PRKCSH-216ENST00000592445 PLEKHH1Q9ULM0 1364 aa29.43■■■□□ 2.3
PRKCSH-216ENST00000592445 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.42■■■□□ 2.3
PRKCSH-216ENST00000592445 ABCC11Q96J66 1382 aa29.42■■■□□ 2.3
PRKCSH-216ENST00000592445 SLIT2O94813 1529 aa29.42■■■□□ 2.3
PRKCSH-216ENST00000592445 HAP1P54257 671 aaPredicted RBP29.42■■■□□ 2.3
PRKCSH-216ENST00000592445 KRT28Q7Z3Y7 464 aa29.42■■■□□ 2.3
PRKCSH-216ENST00000592445 BLMP54132 1417 aaPredicted RBP29.42■■■□□ 2.3
PRKCSH-216ENST00000592445 ANKRD30BQ9BXX2 1392 aa29.41■■■□□ 2.3
PRKCSH-216ENST00000592445 GLI3P10071 1580 aa29.4■■■□□ 2.3
PRKCSH-216ENST00000592445 SF3B2Q13435 895 aaKnown RBP29.38■■■□□ 2.29
PRKCSH-216ENST00000592445 KIF1AQ12756 1690 aa29.37■■■□□ 2.29
PRKCSH-216ENST00000592445 PLEKHG5O94827 1062 aa29.37■■■□□ 2.29
PRKCSH-216ENST00000592445 FMN2Q9NZ56 1722 aa29.37■■■□□ 2.29
PRKCSH-216ENST00000592445 SPATA31E1Q6ZUB1 1445 aa29.37■■■□□ 2.29
PRKCSH-216ENST00000592445 USP32Q8NFA0 1604 aa29.35■■■□□ 2.29
PRKCSH-216ENST00000592445 KNDC1Q76NI1 1749 aa29.35■■■□□ 2.29
PRKCSH-216ENST00000592445 PSME1Q06323 249 aa29.35■■■□□ 2.29
PRKCSH-216ENST00000592445 DEFB132Q7Z7B7 95 aa29.35■■■□□ 2.29
PRKCSH-216ENST00000592445 SEPT12Q8IYM1 358 aa29.35■■■□□ 2.29
PRKCSH-216ENST00000592445 CCDC9Q9Y3X0 531 aaKnown RBP29.35■■■□□ 2.29
PRKCSH-216ENST00000592445 YTHDC2Q9H6S0 1430 aaKnown RBP29.35■■■□□ 2.29
PRKCSH-216ENST00000592445 PHF8Q9UPP1 1060 aa29.34■■■□□ 2.29
PRKCSH-216ENST00000592445 CABLES1Q8TDN4 633 aa29.33■■■□□ 2.29
PRKCSH-216ENST00000592445 PIK3C2GO75747 1445 aa29.33■■■□□ 2.29
PRKCSH-216ENST00000592445 TNS3Q68CZ2 1445 aa29.32■■■□□ 2.28
PRKCSH-216ENST00000592445 VPS72Q15906 364 aa29.32■■■□□ 2.28
PRKCSH-216ENST00000592445 LMOD2Q6P5Q4 547 aa29.32■■■□□ 2.28
PRKCSH-216ENST00000592445 IFT172Q9UG01 1749 aa29.31■■■□□ 2.28
PRKCSH-216ENST00000592445 BRWD3Q6RI45 1802 aa29.29■■■□□ 2.28
PRKCSH-216ENST00000592445 SIRT1Q96EB6 747 aa29.29■■■□□ 2.28
PRKCSH-216ENST00000592445 MPHOSPH9Q99550 1183 aa29.29■■■□□ 2.28
PRKCSH-216ENST00000592445 KRT27Q7Z3Y8 459 aa29.27■■■□□ 2.28
PRKCSH-216ENST00000592445 SBNO1A3KN83 1393 aa29.25■■■□□ 2.27
PRKCSH-216ENST00000592445 A0A0G2JS52 829 aa29.24■■■□□ 2.27
PRKCSH-216ENST00000592445 ONECUT3O60422 494 aaPredicted RBP29.24■■■□□ 2.27
PRKCSH-216ENST00000592445 MYT1Q01538 1121 aa29.24■■■□□ 2.27
PRKCSH-216ENST00000592445 SAFB2Q14151 953 aaKnown RBP eCLIP29.24■■■□□ 2.27
PRKCSH-216ENST00000592445 C14orf93Q9H972 538 aaKnown RBP29.24■■■□□ 2.27
PRKCSH-216ENST00000592445 ARHGEF10O15013 1369 aa29.24■■■□□ 2.27
PRKCSH-216ENST00000592445 RGPD8O14715 1765 aaPredicted RBP29.24■■■□□ 2.27
PRKCSH-216ENST00000592445 DHX57Q6P158 1386 aaKnown RBP29.23■■■□□ 2.27
PRKCSH-216ENST00000592445 PLCH1Q4KWH8 1693 aa29.22■■■□□ 2.27
PRKCSH-216ENST00000592445 NWD2Q9ULI1 1742 aa29.21■■■□□ 2.27
PRKCSH-216ENST00000592445 PRAM1Q96QH2 718 aa29.21■■■□□ 2.27
PRKCSH-216ENST00000592445 NRXN1Q9ULB1 1477 aa29.21■■■□□ 2.27
PRKCSH-216ENST00000592445 FAM83GA6ND36 823 aa29.2■■■□□ 2.26
PRKCSH-216ENST00000592445 CFAP70Q5T0N1 1121 aa29.2■■■□□ 2.26
PRKCSH-216ENST00000592445 PMFBP1Q8TBY8 1022 aa29.18■■■□□ 2.26
PRKCSH-216ENST00000592445 BAG6P46379 1132 aa29.17■■■□□ 2.26
PRKCSH-216ENST00000592445 POGKQ9P215 609 aa29.17■■■□□ 2.26
PRKCSH-216ENST00000592445 ABCA3Q99758 1704 aa29.15■■■□□ 2.26
PRKCSH-216ENST00000592445 FAM98CQ17RN3 349 aaKnown RBP29.15■■■□□ 2.26
PRKCSH-216ENST00000592445 PSDA5PKW4 1024 aaPredicted RBP29.14■■■□□ 2.26
PRKCSH-216ENST00000592445 BTG4Q9NY30 223 aa29.13■■■□□ 2.25
PRKCSH-216ENST00000592445 LRP5O75197 1615 aa29.12■■■□□ 2.25
PRKCSH-216ENST00000592445 ANKARQ7Z5J8 1434 aa29.11■■■□□ 2.25
PRKCSH-216ENST00000592445 GPRASP1Q5JY77 1395 aa29.08■■■□□ 2.25
PRKCSH-216ENST00000592445 HIRIP3Q9BW71 556 aaPredicted RBP29.07■■■□□ 2.24
PRKCSH-216ENST00000592445 DLC1Q96QB1 1528 aa29.06■■■□□ 2.24
PRKCSH-216ENST00000592445 HRCP23327 699 aa29.06■■■□□ 2.24
PRKCSH-216ENST00000592445 NRAPQ86VF7 1730 aa29.06■■■□□ 2.24
PRKCSH-216ENST00000592445 EN1Q05925 392 aaPredicted RBP29.04■■■□□ 2.24
PRKCSH-216ENST00000592445 FAM182BQ5T319 152 aa29.03■■■□□ 2.24
PRKCSH-216ENST00000592445 TRAK1Q9UPV9 953 aa29.03■■■□□ 2.24
PRKCSH-216ENST00000592445 COL14A1Q05707 1796 aaKnown RBP29.03■■■□□ 2.24
PRKCSH-216ENST00000592445 ACIN1Q9UKV3 1341 aaKnown RBP29.02■■■□□ 2.24
PRKCSH-216ENST00000592445 ADGRB2O60241 1585 aa29.02■■■□□ 2.24
PRKCSH-216ENST00000592445 TRPM3Q9HCF6 1732 aaPredicted RBP29.02■■■□□ 2.24
PRKCSH-216ENST00000592445 EIF3AQ14152 1382 aaKnown RBP29.01■■■□□ 2.24
PRKCSH-216ENST00000592445 MINK1Q8N4C8 1332 aaPredicted RBP29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms