RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 KNDC1Q76NI1 1749 aa34.92■■■■□ 3.18
RUNDC3A-206ENST00000590941 C3P01024 1663 aa34.92■■■■□ 3.18
RUNDC3A-206ENST00000590941 NSD2O96028 1365 aa34.92■■■■□ 3.18
RUNDC3A-206ENST00000590941 FKBP8Q14318 412 aa34.92■■■■□ 3.18
RUNDC3A-206ENST00000590941 PELP1Q8IZL8 1130 aaKnown RBP34.9■■■■□ 3.18
RUNDC3A-206ENST00000590941 PRAM1Q96QH2 718 aa34.9■■■■□ 3.18
RUNDC3A-206ENST00000590941 SLC12A5Q9H2X9 1139 aa34.86■■■■□ 3.17
RUNDC3A-206ENST00000590941 NUDCQ9Y266 331 aa34.86■■■■□ 3.17
RUNDC3A-206ENST00000590941 CGNL1Q0VF96 1302 aa34.86■■■■□ 3.17
RUNDC3A-206ENST00000590941 PDE3BQ13370 1112 aa34.86■■■■□ 3.17
RUNDC3A-206ENST00000590941 ERICH6BQ5W0A0 696 aa34.86■■■■□ 3.17
RUNDC3A-206ENST00000590941 SIRT1Q96EB6 747 aa34.85■■■■□ 3.17
RUNDC3A-206ENST00000590941 TECPR2O15040 1411 aa34.84■■■■□ 3.17
RUNDC3A-206ENST00000590941 WDR43Q15061 677 aaKnown RBP eCLIP34.83■■■■□ 3.17
RUNDC3A-206ENST00000590941 SRPK2P78362 688 aaKnown RBP34.82■■■■□ 3.17
RUNDC3A-206ENST00000590941 FAM135BQ49AJ0 1406 aa34.82■■■■□ 3.17
RUNDC3A-206ENST00000590941 CPS1P31327 1500 aa34.8■■■■□ 3.16
RUNDC3A-206ENST00000590941 PLEKHG1Q9ULL1 1385 aa34.8■■■■□ 3.16
RUNDC3A-206ENST00000590941 CABP2Q9NPB3 220 aa34.79■■■■□ 3.16
RUNDC3A-206ENST00000590941 SAFB2Q14151 953 aaKnown RBP eCLIP34.79■■■■□ 3.16
RUNDC3A-206ENST00000590941 SLIT1O75093 1534 aa34.79■■■■□ 3.16
RUNDC3A-206ENST00000590941 MINK1Q8N4C8 1332 aaPredicted RBP34.78■■■■□ 3.16
RUNDC3A-206ENST00000590941 TERF2IPQ9NYB0 399 aa34.77■■■■□ 3.16
RUNDC3A-206ENST00000590941 POLR3AO14802 1390 aaPredicted RBP34.76■■■■□ 3.15
RUNDC3A-206ENST00000590941 MORC1Q86VD1 984 aa34.75■■■■□ 3.15
RUNDC3A-206ENST00000590941 ARHGAP23Q9P227 1491 aa34.75■■■■□ 3.15
RUNDC3A-206ENST00000590941 METP08581 1390 aa34.72■■■■□ 3.15
RUNDC3A-206ENST00000590941 EID1Q9Y6B2 187 aa34.72■■■■□ 3.15
RUNDC3A-206ENST00000590941 MED14O60244 1454 aa34.71■■■■□ 3.15
RUNDC3A-206ENST00000590941 SENP3Q9H4L4 574 aaPredicted RBP34.7■■■■□ 3.15
RUNDC3A-206ENST00000590941 A0A1W2PP64 1363 aa34.7■■■■□ 3.15
RUNDC3A-206ENST00000590941 CDK19Q9BWU1 502 aa34.7■■■■□ 3.14
RUNDC3A-206ENST00000590941 ATP7BP35670 1465 aa34.69■■■■□ 3.14
RUNDC3A-206ENST00000590941 ADAMTS8Q9UP79 889 aa34.69■■■■□ 3.14
RUNDC3A-206ENST00000590941 ADAMTS13Q76LX8 1427 aa34.69■■■■□ 3.14
RUNDC3A-206ENST00000590941 HDGFL2Q7Z4V5 671 aaPredicted RBP34.68■■■■□ 3.14
RUNDC3A-206ENST00000590941 ANKRD26Q9UPS8 1709 aa34.67■■■■□ 3.14
RUNDC3A-206ENST00000590941 DIP2AQ14689 1571 aa34.67■■■■□ 3.14
RUNDC3A-206ENST00000590941 CEBPAP49715 358 aaPredicted RBP34.66■■■■□ 3.14
RUNDC3A-206ENST00000590941 BCANQ96GW7 911 aa34.66■■■■□ 3.14
RUNDC3A-206ENST00000590941 THEMISQ8N1K5 641 aaPredicted RBP34.65■■■■□ 3.14
RUNDC3A-206ENST00000590941 NGEFQ8N5V2 710 aa34.65■■■■□ 3.14
RUNDC3A-206ENST00000590941 CD163L1Q9NR16 1453 aa34.63■■■■□ 3.13
RUNDC3A-206ENST00000590941 PLEKHH1Q9ULM0 1364 aa34.62■■■■□ 3.13
RUNDC3A-206ENST00000590941 TXNDC2Q86VQ3 553 aa34.62■■■■□ 3.13
RUNDC3A-206ENST00000590941 ADGRB2O60241 1585 aa34.61■■■■□ 3.13
RUNDC3A-206ENST00000590941 CFAP53Q96M91 514 aa34.6■■■■□ 3.13
RUNDC3A-206ENST00000590941 RNF123Q5XPI4 1314 aa34.6■■■■□ 3.13
RUNDC3A-206ENST00000590941 WAPLQ7Z5K2 1190 aa34.6■■■■□ 3.13
RUNDC3A-206ENST00000590941 WASLO00401 505 aaPredicted RBP34.58■■■■□ 3.13
RUNDC3A-206ENST00000590941 LTKP29376 864 aa34.56■■■■□ 3.12
RUNDC3A-206ENST00000590941 CEP170BQ9Y4F5 1589 aaPredicted RBP34.56■■■■□ 3.12
RUNDC3A-206ENST00000590941 RIMS1Q86UR5 1692 aaKnown RBP34.56■■■■□ 3.12
RUNDC3A-206ENST00000590941 KIF20BQ96Q89 1820 aa34.56■■■■□ 3.12
RUNDC3A-206ENST00000590941 SHPRHQ149N8 1683 aa34.53■■■■□ 3.12
RUNDC3A-206ENST00000590941 TBX22Q9Y458 520 aa34.53■■■■□ 3.12
RUNDC3A-206ENST00000590941 ADAMTSL3P82987 1691 aa34.52■■■■□ 3.12
RUNDC3A-206ENST00000590941 CABP1Q9NZU7 370 aa34.5■■■■□ 3.11
RUNDC3A-206ENST00000590941 ZNF142P52746 1687 aaPredicted RBP34.49■■■■□ 3.11
RUNDC3A-206ENST00000590941 PTCH1Q13635 1447 aa34.48■■■■□ 3.11
RUNDC3A-206ENST00000590941 CDC42BPGQ6DT37 1551 aa34.48■■■■□ 3.11
RUNDC3A-206ENST00000590941 PPIP5K1Q6PFW1 1433 aa34.47■■■■□ 3.11
RUNDC3A-206ENST00000590941 ROBO2Q9HCK4 1378 aa34.47■■■■□ 3.11
RUNDC3A-206ENST00000590941 CPSF1Q10570 1443 aaKnown RBP34.46■■■■□ 3.11
RUNDC3A-206ENST00000590941 PPP4R2Q9NY27 417 aa34.46■■■■□ 3.11
RUNDC3A-206ENST00000590941 SALL2Q9Y467 1007 aaPredicted RBP34.46■■■■□ 3.11
RUNDC3A-206ENST00000590941 EDC4Q6P2E9 1401 aaKnown RBP34.46■■■■□ 3.11
RUNDC3A-206ENST00000590941 MTHFSP49914 203 aa34.45■■■■□ 3.11
RUNDC3A-206ENST00000590941 PIK3R4Q99570 1358 aa34.44■■■■□ 3.1
RUNDC3A-206ENST00000590941 FYB1O15117 783 aa34.44■■■■□ 3.1
RUNDC3A-206ENST00000590941 ZNF521Q96K83 1311 aa34.43■■■■□ 3.1
RUNDC3A-206ENST00000590941 CCDC61Q9Y6R9 512 aa34.43■■■■□ 3.1
RUNDC3A-206ENST00000590941 TNNT2P45379 298 aaPredicted RBP34.42■■■■□ 3.1
RUNDC3A-206ENST00000590941 ITSN1Q15811 1721 aa34.41■■■■□ 3.1
RUNDC3A-206ENST00000590941 MON2Q7Z3U7 1717 aa34.41■■■■□ 3.1
RUNDC3A-206ENST00000590941 NUDT16Q96DE0 195 aaKnown RBP34.41■■■■□ 3.1
RUNDC3A-206ENST00000590941 RCAN3Q9UKA8 241 aa34.41■■■■□ 3.1
RUNDC3A-206ENST00000590941 SENP3-EIF4A1A0A087X0R7 540 aa34.4■■■■□ 3.1
RUNDC3A-206ENST00000590941 AKAP12Q02952 1782 aa34.39■■■■□ 3.1
RUNDC3A-206ENST00000590941 IRX6P78412 446 aaPredicted RBP34.38■■■■□ 3.09
RUNDC3A-206ENST00000590941 GOLGA2Q08379 1002 aa34.38■■■■□ 3.09
RUNDC3A-206ENST00000590941 NCBP3Q53F19 620 aaKnown RBP34.38■■■■□ 3.09
RUNDC3A-206ENST00000590941 GGNBP2Q9H3C7 697 aa34.38■■■■□ 3.09
RUNDC3A-206ENST00000590941 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.38■■■■□ 3.09
RUNDC3A-206ENST00000590941 PTPRUQ92729 1446 aa34.38■■■■□ 3.09
RUNDC3A-206ENST00000590941 PLPPR3Q6T4P5 718 aa34.38■■■■□ 3.09
RUNDC3A-206ENST00000590941 XRN1Q8IZH2 1706 aaKnown RBP34.37■■■■□ 3.09
RUNDC3A-206ENST00000590941 ZNF692Q9BU19 519 aaPredicted RBP34.37■■■■□ 3.09
RUNDC3A-206ENST00000590941 TOPAZ1Q8N9V7 1692 aa34.37■■■■□ 3.09
RUNDC3A-206ENST00000590941 RUNDC1Q96C34 613 aa34.35■■■■□ 3.09
RUNDC3A-206ENST00000590941 SLC26A8Q96RN1 970 aa34.35■■■■□ 3.09
RUNDC3A-206ENST00000590941 CDCA7LQ96GN5 454 aa34.34■■■■□ 3.09
RUNDC3A-206ENST00000590941 APAF1O14727 1248 aa34.33■■■■□ 3.09
RUNDC3A-206ENST00000590941 CCDC146Q8IYE0 955 aa34.33■■■■□ 3.09
RUNDC3A-206ENST00000590941 AMOTL2Q9Y2J4 779 aa34.33■■■■□ 3.09
RUNDC3A-206ENST00000590941 SETD1BQ9UPS6 1966 aaKnown RBP34.32■■■■□ 3.09
RUNDC3A-206ENST00000590941 COL3A1P02461 1466 aaPredicted RBP34.31■■■■□ 3.08
RUNDC3A-206ENST00000590941 RRP1P56182 461 aaKnown RBP34.31■■■■□ 3.08
RUNDC3A-206ENST00000590941 IQSEC2Q5JU85 1478 aa34.3■■■■□ 3.08
RUNDC3A-206ENST00000590941 PNPLA6Q8IY17 1366 aa34.27■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms