RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 PANK3Q9H999 370 aa17.73■□□□□ 0.43
PTBP1-216ENST00000590887 KNSTRNQ9Y448 316 aa17.73■□□□□ 0.43
PTBP1-216ENST00000590887 ATAD2Q6PL18 1390 aa17.73■□□□□ 0.43
PTBP1-216ENST00000590887 CPS1P31327 1500 aa17.72■□□□□ 0.43
PTBP1-216ENST00000590887 SRPK2P78362 688 aaKnown RBP17.71■□□□□ 0.43
PTBP1-216ENST00000590887 SLC26A8Q96RN1 970 aa17.71■□□□□ 0.43
PTBP1-216ENST00000590887 PRKRIP1Q9H875 184 aaPredicted RBP17.71■□□□□ 0.43
PTBP1-216ENST00000590887 SAFB2Q14151 953 aaKnown RBP eCLIP17.7■□□□□ 0.42
PTBP1-216ENST00000590887 MINK1Q8N4C8 1332 aaPredicted RBP17.7■□□□□ 0.42
PTBP1-216ENST00000590887 TMC1Q8TDI8 760 aa17.69■□□□□ 0.42
PTBP1-216ENST00000590887 AMOTL2Q9Y2J4 779 aa17.69■□□□□ 0.42
PTBP1-216ENST00000590887 NPHP4O75161 1426 aaPredicted RBP17.68■□□□□ 0.42
PTBP1-216ENST00000590887 FBXO41Q8TF61 875 aa17.67■□□□□ 0.42
PTBP1-216ENST00000590887 PTCH1Q13635 1447 aa17.66■□□□□ 0.42
PTBP1-216ENST00000590887 PER1O15534 1290 aaPredicted RBP17.66■□□□□ 0.42
PTBP1-216ENST00000590887 WAPLQ7Z5K2 1190 aa17.66■□□□□ 0.42
PTBP1-216ENST00000590887 CDK19Q9BWU1 502 aa17.66■□□□□ 0.42
PTBP1-216ENST00000590887 TERF2IPQ9NYB0 399 aa17.65■□□□□ 0.42
PTBP1-216ENST00000590887 NPC1L1Q9UHC9 1359 aa17.65■□□□□ 0.42
PTBP1-216ENST00000590887 TULP4Q9NRJ4 1543 aa17.64■□□□□ 0.41
PTBP1-216ENST00000590887 WASLO00401 505 aaPredicted RBP17.64■□□□□ 0.41
PTBP1-216ENST00000590887 HDGFL2Q7Z4V5 671 aaPredicted RBP17.63■□□□□ 0.41
PTBP1-216ENST00000590887 CERKQ8TCT0 537 aa17.63■□□□□ 0.41
PTBP1-216ENST00000590887 CABP2Q9NPB3 220 aa17.63■□□□□ 0.41
PTBP1-216ENST00000590887 MYOM1P52179 1685 aa17.63■□□□□ 0.41
PTBP1-216ENST00000590887 CENPBP07199 599 aaPredicted RBP17.62■□□□□ 0.41
PTBP1-216ENST00000590887 CHD2O14647 1828 aaKnown RBP17.61■□□□□ 0.41
PTBP1-216ENST00000590887 MYBBP1AQ9BQG0 1328 aaKnown RBP17.61■□□□□ 0.41
PTBP1-216ENST00000590887 NCKAP5LQ9HCH0 1330 aa17.61■□□□□ 0.41
PTBP1-216ENST00000590887 ANKRD36BQ8N2N9 1353 aa17.61■□□□□ 0.41
PTBP1-216ENST00000590887 KCNA6P17658 529 aa17.6■□□□□ 0.41
PTBP1-216ENST00000590887 ROBO2Q9HCK4 1378 aa17.6■□□□□ 0.41
PTBP1-216ENST00000590887 PLEKHH1Q9ULM0 1364 aa17.6■□□□□ 0.41
PTBP1-216ENST00000590887 PTPRUQ92729 1446 aa17.6■□□□□ 0.41
PTBP1-216ENST00000590887 XRN1Q8IZH2 1706 aaKnown RBP17.59■□□□□ 0.41
PTBP1-216ENST00000590887 ADGRB2O60241 1585 aa17.59■□□□□ 0.41
PTBP1-216ENST00000590887 SLC12A5Q9H2X9 1139 aa17.59■□□□□ 0.41
PTBP1-216ENST00000590887 LTBP4Q8N2S1 1624 aa17.58■□□□□ 0.41
PTBP1-216ENST00000590887 CGNL1Q0VF96 1302 aa17.58■□□□□ 0.4
PTBP1-216ENST00000590887 MRS2Q9HD23 443 aa17.58■□□□□ 0.4
PTBP1-216ENST00000590887 CCDC61Q9Y6R9 512 aa17.58■□□□□ 0.4
PTBP1-216ENST00000590887 PARD3Q8TEW0 1356 aa17.57■□□□□ 0.4
PTBP1-216ENST00000590887 NSD2O96028 1365 aa17.56■□□□□ 0.4
PTBP1-216ENST00000590887 CC2D1BQ5T0F9 858 aaKnown RBP17.56■□□□□ 0.4
PTBP1-216ENST00000590887 NLRP13Q86W25 1043 aa17.56■□□□□ 0.4
PTBP1-216ENST00000590887 ZNF692Q9BU19 519 aaPredicted RBP17.56■□□□□ 0.4
PTBP1-216ENST00000590887 BRD4O60885 1362 aaPredicted RBP17.55■□□□□ 0.4
PTBP1-216ENST00000590887 CNGB1Q14028 1251 aaPredicted RBP17.55■□□□□ 0.4
PTBP1-216ENST00000590887 AMER1Q5JTC6 1135 aaPredicted RBP17.55■□□□□ 0.4
PTBP1-216ENST00000590887 NUDT16Q96DE0 195 aaKnown RBP17.55■□□□□ 0.4
PTBP1-216ENST00000590887 ATP7BP35670 1465 aa17.55■□□□□ 0.4
PTBP1-216ENST00000590887 USP32Q8NFA0 1604 aa17.54■□□□□ 0.4
PTBP1-216ENST00000590887 CABP1Q9NZU7 370 aa17.53■□□□□ 0.4
PTBP1-216ENST00000590887 NSD3Q9BZ95 1437 aa17.53■□□□□ 0.4
PTBP1-216ENST00000590887 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.52■□□□□ 0.39
PTBP1-216ENST00000590887 PPIP5K1Q6PFW1 1433 aa17.51■□□□□ 0.39
PTBP1-216ENST00000590887 YTHDC1Q96MU7 727 aaKnown RBP17.51■□□□□ 0.39
PTBP1-216ENST00000590887 CARD14Q9BXL6 1004 aa17.51■□□□□ 0.39
PTBP1-216ENST00000590887 ITSN1Q15811 1721 aa17.5■□□□□ 0.39
PTBP1-216ENST00000590887 NWD1Q149M9 1564 aa17.5■□□□□ 0.39
PTBP1-216ENST00000590887 ANKARQ7Z5J8 1434 aa17.5■□□□□ 0.39
PTBP1-216ENST00000590887 MORC1Q86VD1 984 aa17.5■□□□□ 0.39
PTBP1-216ENST00000590887 NKTRP30414 1462 aaKnown RBP17.5■□□□□ 0.39
PTBP1-216ENST00000590887 C14orf37Q86TY3 774 aa17.49■□□□□ 0.39
PTBP1-216ENST00000590887 PROSER2Q86WR7 435 aaPredicted RBP17.49■□□□□ 0.39
PTBP1-216ENST00000590887 IQSEC2Q5JU85 1478 aa17.49■□□□□ 0.39
PTBP1-216ENST00000590887 NCOA3Q9Y6Q9 1424 aa17.48■□□□□ 0.39
PTBP1-216ENST00000590887 PLEKHG3A1L390 1219 aa17.48■□□□□ 0.39
PTBP1-216ENST00000590887 A0A1W2PP64 1363 aa17.48■□□□□ 0.39
PTBP1-216ENST00000590887 ZNF335Q9H4Z2 1342 aaPredicted RBP17.47■□□□□ 0.39
PTBP1-216ENST00000590887 CDC42BPGQ6DT37 1551 aa17.45■□□□□ 0.38
PTBP1-216ENST00000590887 PPP2R1AP30153 589 aa17.45■□□□□ 0.38
PTBP1-216ENST00000590887 EDC4Q6P2E9 1401 aaKnown RBP17.45■□□□□ 0.38
PTBP1-216ENST00000590887 ADGRL3Q9HAR2 1447 aa17.45■□□□□ 0.38
PTBP1-216ENST00000590887 CPSF1Q10570 1443 aaKnown RBP17.44■□□□□ 0.38
PTBP1-216ENST00000590887 FAM9BQ8IZU0 186 aa17.43■□□□□ 0.38
PTBP1-216ENST00000590887 CFAP53Q96M91 514 aa17.43■□□□□ 0.38
PTBP1-216ENST00000590887 STRCP1A6NGW2 1772 aa17.43■□□□□ 0.38
PTBP1-216ENST00000590887 FMN2Q9NZ56 1722 aa17.42■□□□□ 0.38
PTBP1-216ENST00000590887 NGDNQ8NEJ9 315 aaKnown RBP17.42■□□□□ 0.38
PTBP1-216ENST00000590887 C19orf44Q9H6X5 657 aa17.42■□□□□ 0.38
PTBP1-216ENST00000590887 AKAP12Q02952 1782 aa17.42■□□□□ 0.38
PTBP1-216ENST00000590887 CD163L1Q9NR16 1453 aa17.42■□□□□ 0.38
PTBP1-216ENST00000590887 TOPAZ1Q8N9V7 1692 aa17.42■□□□□ 0.38
PTBP1-216ENST00000590887 KIF20BQ96Q89 1820 aa17.41■□□□□ 0.38
PTBP1-216ENST00000590887 PRR36Q9H6K5 1346 aa17.41■□□□□ 0.38
PTBP1-216ENST00000590887 ANKRD26Q9UPS8 1709 aa17.41■□□□□ 0.38
PTBP1-216ENST00000590887 PNISRQ8TF01 805 aaKnown RBP17.4■□□□□ 0.38
PTBP1-216ENST00000590887 ACEP12821 1306 aa17.4■□□□□ 0.38
PTBP1-216ENST00000590887 INSRP06213 1382 aa17.4■□□□□ 0.38
PTBP1-216ENST00000590887 MON2Q7Z3U7 1717 aa17.39■□□□□ 0.37
PTBP1-216ENST00000590887 WDR43Q15061 677 aaKnown RBP eCLIP17.39■□□□□ 0.378e-6■■□□□ 11.7
PTBP1-216ENST00000590887 TTC21AQ8NDW8 1320 aa17.39■□□□□ 0.37
PTBP1-216ENST00000590887 NALCNQ8IZF0 1738 aa17.38■□□□□ 0.37
PTBP1-216ENST00000590887 FYB1O15117 783 aa17.38■□□□□ 0.37
PTBP1-216ENST00000590887 ATF3P18847 181 aa17.38■□□□□ 0.37
PTBP1-216ENST00000590887 CCDC184Q52MB2 194 aa17.38■□□□□ 0.37
PTBP1-216ENST00000590887 NUTM2FA1L443 756 aa17.37■□□□□ 0.37
PTBP1-216ENST00000590887 COG3Q96JB2 828 aa17.37■□□□□ 0.37
PTBP1-216ENST00000590887 SCAF1Q9H7N4 1312 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms