RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 SOS2Q07890 1332 aaPredicted RBP31.24■■■□□ 2.59
R3HDM4-206ENST00000590454 PPLO60437 1756 aa31.23■■■□□ 2.59
R3HDM4-206ENST00000590454 USP21Q9UK80 565 aa31.23■■■□□ 2.59
R3HDM4-206ENST00000590454 NALCNQ8IZF0 1738 aa31.23■■■□□ 2.59
R3HDM4-206ENST00000590454 ATAD2Q6PL18 1390 aa31.22■■■□□ 2.59
R3HDM4-206ENST00000590454 ORAI2Q96SN7 254 aa31.21■■■□□ 2.59
R3HDM4-206ENST00000590454 TRPC5Q9UL62 973 aaPredicted RBP31.21■■■□□ 2.59
R3HDM4-206ENST00000590454 RPGRIP1LQ68CZ1 1315 aa31.21■■■□□ 2.59
R3HDM4-206ENST00000590454 NEUROD1Q13562 356 aa31.2■■■□□ 2.59
R3HDM4-206ENST00000590454 IFT172Q9UG01 1749 aa31.2■■■□□ 2.58
R3HDM4-206ENST00000590454 PTCH1Q13635 1447 aa31.18■■■□□ 2.58
R3HDM4-206ENST00000590454 VGFO15240 615 aaPredicted RBP31.17■■■□□ 2.58
R3HDM4-206ENST00000590454 FNBP4Q8N3X1 1017 aaPredicted RBP31.17■■■□□ 2.58
R3HDM4-206ENST00000590454 LAMC1P11047 1609 aa31.16■■■□□ 2.58
R3HDM4-206ENST00000590454 ROBO2Q9HCK4 1378 aa31.15■■■□□ 2.58
R3HDM4-206ENST00000590454 ADGRF5Q8IZF2 1346 aa31.14■■■□□ 2.58
R3HDM4-206ENST00000590454 ZRANB1Q9UGI0 708 aa31.1■■■□□ 2.57
R3HDM4-206ENST00000590454 CCER1Q8TC90 406 aaPredicted RBP31.09■■■□□ 2.57
R3HDM4-206ENST00000590454 DCAF11Q8TEB1 546 aa31.09■■■□□ 2.57
R3HDM4-206ENST00000590454 ATRNO75882 1429 aa31.08■■■□□ 2.57
R3HDM4-206ENST00000590454 KDM2AQ9Y2K7 1162 aa31.08■■■□□ 2.57
R3HDM4-206ENST00000590454 PRAG1Q86YV5 1406 aa31.07■■■□□ 2.56
R3HDM4-206ENST00000590454 CCDC125Q86Z20 511 aa31.05■■■□□ 2.56
R3HDM4-206ENST00000590454 L3MBTL2Q969R5 705 aa31.05■■■□□ 2.56
R3HDM4-206ENST00000590454 MYOM2P54296 1465 aa31.05■■■□□ 2.56
R3HDM4-206ENST00000590454 NPHP3Q7Z494 1330 aa31.04■■■□□ 2.56
R3HDM4-206ENST00000590454 ESCO1Q5FWF5 840 aa31.03■■■□□ 2.56
R3HDM4-206ENST00000590454 COL22A1Q8NFW1 1626 aaPredicted RBP31.02■■■□□ 2.56
R3HDM4-206ENST00000590454 NRXN1Q9ULB1 1477 aa31.02■■■□□ 2.56
R3HDM4-206ENST00000590454 PIK3C2GO75747 1445 aa31.01■■■□□ 2.55
R3HDM4-206ENST00000590454 BCL9LQ86UU0 1499 aa30.99■■■□□ 2.55
R3HDM4-206ENST00000590454 CLSPNQ9HAW4 1339 aa30.98■■■□□ 2.55
R3HDM4-206ENST00000590454 GJD4Q96KN9 370 aaPredicted RBP30.97■■■□□ 2.55
R3HDM4-206ENST00000590454 FOXO3O43524 673 aa30.96■■■□□ 2.55
R3HDM4-206ENST00000590454 LRPPRCP42704 1394 aaKnown RBP30.94■■■□□ 2.54
R3HDM4-206ENST00000590454 PXDNQ92626 1479 aa30.94■■■□□ 2.54
R3HDM4-206ENST00000590454 XPCQ01831 940 aaPredicted RBP30.93■■■□□ 2.54
R3HDM4-206ENST00000590454 TONSLQ96HA7 1378 aa30.92■■■□□ 2.54
R3HDM4-206ENST00000590454 CFAP70Q5T0N1 1121 aa30.92■■■□□ 2.54
R3HDM4-206ENST00000590454 CDC42BPGQ6DT37 1551 aa30.92■■■□□ 2.54
R3HDM4-206ENST00000590454 STAC3Q96MF2 364 aa30.9■■■□□ 2.54
R3HDM4-206ENST00000590454 SRCAPQ6ZRS2 3230 aa30.9■■■□□ 2.54
R3HDM4-206ENST00000590454 C14orf93Q9H972 538 aaKnown RBP30.89■■■□□ 2.54
R3HDM4-206ENST00000590454 TMEM132EQ6IEE7 984 aa30.87■■■□□ 2.53
R3HDM4-206ENST00000590454 UNC5CLQ8IV45 518 aa30.87■■■□□ 2.53
R3HDM4-206ENST00000590454 NUTM2FA1L443 756 aa30.85■■■□□ 2.53
R3HDM4-206ENST00000590454 WAPLQ7Z5K2 1190 aa30.84■■■□□ 2.53
R3HDM4-206ENST00000590454 STK26Q9P289 416 aa30.84■■■□□ 2.53
R3HDM4-206ENST00000590454 MARF1Q9Y4F3 1742 aaKnown RBP30.84■■■□□ 2.53
R3HDM4-206ENST00000590454 NBPF8Q3BBV2 869 aa30.82■■■□□ 2.52
R3HDM4-206ENST00000590454 BLMP54132 1417 aaPredicted RBP30.81■■■□□ 2.52
R3HDM4-206ENST00000590454 SPATA31A3Q5VYP0 1347 aa30.8■■■□□ 2.52
R3HDM4-206ENST00000590454 RALGAPBQ86X10 1494 aa30.8■■■□□ 2.52
R3HDM4-206ENST00000590454 TECPR2O15040 1411 aa30.8■■■□□ 2.52
R3HDM4-206ENST00000590454 SLIT2O94813 1529 aa30.79■■■□□ 2.52
R3HDM4-206ENST00000590454 ADGRB1O14514 1584 aa30.79■■■□□ 2.52
R3HDM4-206ENST00000590454 NBPF1Q3BBV0 1214 aa30.77■■■□□ 2.52
R3HDM4-206ENST00000590454 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.77■■■□□ 2.52
R3HDM4-206ENST00000590454 ABCC11Q96J66 1382 aa30.77■■■□□ 2.52
R3HDM4-206ENST00000590454 EP400Q96L91 3159 aa30.76■■■□□ 2.51
R3HDM4-206ENST00000590454 SF3B2Q13435 895 aaKnown RBP30.75■■■□□ 2.51
R3HDM4-206ENST00000590454 KRT28Q7Z3Y7 464 aa30.75■■■□□ 2.51
R3HDM4-206ENST00000590454 GLI3P10071 1580 aa30.75■■■□□ 2.51
R3HDM4-206ENST00000590454 YTHDC2Q9H6S0 1430 aaKnown RBP30.74■■■□□ 2.51
R3HDM4-206ENST00000590454 KIAA1210Q9ULL0 1709 aa30.74■■■□□ 2.51
R3HDM4-206ENST00000590454 PLEKHH1Q9ULM0 1364 aa30.73■■■□□ 2.51
R3HDM4-206ENST00000590454 TRPM1Q7Z4N2 1603 aa30.73■■■□□ 2.51
R3HDM4-206ENST00000590454 HAP1P54257 671 aaPredicted RBP30.72■■■□□ 2.51
R3HDM4-206ENST00000590454 DEFB132Q7Z7B7 95 aa30.72■■■□□ 2.51
R3HDM4-206ENST00000590454 SEPT12Q8IYM1 358 aa30.72■■■□□ 2.51
R3HDM4-206ENST00000590454 VPS72Q15906 364 aa30.7■■■□□ 2.51
R3HDM4-206ENST00000590454 TIMELESSQ9UNS1 1208 aa30.7■■■□□ 2.51
R3HDM4-206ENST00000590454 PSME1Q06323 249 aa30.69■■■□□ 2.5
R3HDM4-206ENST00000590454 KIF1AQ12756 1690 aa30.68■■■□□ 2.5
R3HDM4-206ENST00000590454 USP32Q8NFA0 1604 aa30.67■■■□□ 2.5
R3HDM4-206ENST00000590454 SIRT1Q96EB6 747 aa30.67■■■□□ 2.5
R3HDM4-206ENST00000590454 KNDC1Q76NI1 1749 aa30.67■■■□□ 2.5
R3HDM4-206ENST00000590454 ONECUT3O60422 494 aaPredicted RBP30.66■■■□□ 2.5
R3HDM4-206ENST00000590454 PHF8Q9UPP1 1060 aa30.66■■■□□ 2.5
R3HDM4-206ENST00000590454 FMN2Q9NZ56 1722 aa30.65■■■□□ 2.5
R3HDM4-206ENST00000590454 CCDC9Q9Y3X0 531 aaKnown RBP30.65■■■□□ 2.5
R3HDM4-206ENST00000590454 TNS3Q68CZ2 1445 aa30.64■■■□□ 2.5
R3HDM4-206ENST00000590454 CABLES1Q8TDN4 633 aa30.64■■■□□ 2.5
R3HDM4-206ENST00000590454 TRAK1Q9UPV9 953 aa30.64■■■□□ 2.5
R3HDM4-206ENST00000590454 KRT27Q7Z3Y8 459 aa30.63■■■□□ 2.49
R3HDM4-206ENST00000590454 ROCK2O75116 1388 aaKnown RBP30.61■■■□□ 2.49
R3HDM4-206ENST00000590454 PLEKHG5O94827 1062 aa30.6■■■□□ 2.49
R3HDM4-206ENST00000590454 BRWD3Q6RI45 1802 aa30.6■■■□□ 2.49
R3HDM4-206ENST00000590454 SBNO1A3KN83 1393 aa30.59■■■□□ 2.49
R3HDM4-206ENST00000590454 LMOD2Q6P5Q4 547 aa30.59■■■□□ 2.49
R3HDM4-206ENST00000590454 DLC1Q96QB1 1528 aa30.57■■■□□ 2.49
R3HDM4-206ENST00000590454 ARHGEF10O15013 1369 aa30.57■■■□□ 2.48
R3HDM4-206ENST00000590454 PRAM1Q96QH2 718 aa30.57■■■□□ 2.48
R3HDM4-206ENST00000590454 ARHGEF28Q8N1W1 1705 aaKnown RBP30.56■■■□□ 2.48
R3HDM4-206ENST00000590454 GPRASP1Q5JY77 1395 aa30.55■■■□□ 2.48
R3HDM4-206ENST00000590454 FAM83GA6ND36 823 aa30.54■■■□□ 2.48
R3HDM4-206ENST00000590454 BAG6P46379 1132 aa30.54■■■□□ 2.48
R3HDM4-206ENST00000590454 SAFB2Q14151 953 aaKnown RBP eCLIP30.54■■■□□ 2.48
R3HDM4-206ENST00000590454 NWD2Q9ULI1 1742 aa30.53■■■□□ 2.48
R3HDM4-206ENST00000590454 A0A0G2JS52 829 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms