RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 ADAMTS2O95450 1211 aa24.22■■□□□ 1.47
MBD3-206ENST00000589901 LRPPRCP42704 1394 aaKnown RBP24.21■■□□□ 1.47
MBD3-206ENST00000589901 ESCO1Q5FWF5 840 aa24.21■■□□□ 1.47
MBD3-206ENST00000589901 PIK3C2GO75747 1445 aa24.2■■□□□ 1.46
MBD3-206ENST00000589901 TECPR2O15040 1411 aa24.19■■□□□ 1.46
MBD3-206ENST00000589901 UPF1Q92900 1129 aaKnown RBP eCLIP24.19■■□□□ 1.463e-15■■■■■ 34
MBD3-206ENST00000589901 CDC42BPGQ6DT37 1551 aa24.19■■□□□ 1.46
MBD3-206ENST00000589901 IFT172Q9UG01 1749 aa24.18■■□□□ 1.46
MBD3-206ENST00000589901 ABCC11Q96J66 1382 aa24.18■■□□□ 1.46
MBD3-206ENST00000589901 PLEKHH1Q9ULM0 1364 aa24.18■■□□□ 1.46
MBD3-206ENST00000589901 QTRT2Q9H974 415 aaKnown RBP24.18■■□□□ 1.46
MBD3-206ENST00000589901 NUTM2FA1L443 756 aa24.17■■□□□ 1.46
MBD3-206ENST00000589901 NGLY1Q96IV0 654 aa24.17■■□□□ 1.46
MBD3-206ENST00000589901 CDK12Q9NYV4 1490 aaPredicted RBP24.16■■□□□ 1.46
MBD3-206ENST00000589901 NPHP3Q7Z494 1330 aa24.15■■□□□ 1.46
MBD3-206ENST00000589901 FOXO3O43524 673 aa24.15■■□□□ 1.46
MBD3-206ENST00000589901 XPCQ01831 940 aaPredicted RBP24.15■■□□□ 1.46
MBD3-206ENST00000589901 ACIN1Q9UKV3 1341 aaKnown RBP24.14■■□□□ 1.46
MBD3-206ENST00000589901 YTHDC2Q9H6S0 1430 aaKnown RBP24.13■■□□□ 1.45
MBD3-206ENST00000589901 RBM6P78332 1123 aaKnown RBP24.13■■□□□ 1.45
MBD3-206ENST00000589901 C14orf93Q9H972 538 aaKnown RBP24.12■■□□□ 1.45
MBD3-206ENST00000589901 RAB3GAP2Q9H2M9 1393 aa24.12■■□□□ 1.45
MBD3-206ENST00000589901 PXDNQ92626 1479 aa24.12■■□□□ 1.45
MBD3-206ENST00000589901 RGS12O14924 1447 aa24.11■■□□□ 1.45
MBD3-206ENST00000589901 CFAP70Q5T0N1 1121 aa24.11■■□□□ 1.45
MBD3-206ENST00000589901 USP21Q9UK80 565 aa24.09■■□□□ 1.45
MBD3-206ENST00000589901 KNDC1Q76NI1 1749 aa24.09■■□□□ 1.45
MBD3-206ENST00000589901 NRXN1Q9ULB1 1477 aa24.08■■□□□ 1.45
MBD3-206ENST00000589901 MYOM2P54296 1465 aa24.07■■□□□ 1.44
MBD3-206ENST00000589901 COL22A1Q8NFW1 1626 aaPredicted RBP24.07■■□□□ 1.44
MBD3-206ENST00000589901 FNBP4Q8N3X1 1017 aaPredicted RBP24.07■■□□□ 1.44
MBD3-206ENST00000589901 SIRT1Q96EB6 747 aa24.07■■□□□ 1.44
MBD3-206ENST00000589901 DHX57Q6P158 1386 aaKnown RBP24.04■■□□□ 1.44
MBD3-206ENST00000589901 TRPC5Q9UL62 973 aaPredicted RBP24.03■■□□□ 1.44
MBD3-206ENST00000589901 FMN2Q9NZ56 1722 aa24.02■■□□□ 1.44
MBD3-206ENST00000589901 SAFB2Q14151 953 aaKnown RBP eCLIP24.02■■□□□ 1.44
MBD3-206ENST00000589901 PRAM1Q96QH2 718 aa24.02■■□□□ 1.44
MBD3-206ENST00000589901 SPATA31A3Q5VYP0 1347 aa24■■□□□ 1.43
MBD3-206ENST00000589901 ATRNO75882 1429 aa24■■□□□ 1.43
MBD3-206ENST00000589901 KRT28Q7Z3Y7 464 aa23.99■■□□□ 1.43
MBD3-206ENST00000589901 PHF8Q9UPP1 1060 aa23.98■■□□□ 1.43
MBD3-206ENST00000589901 BCL9LQ86UU0 1499 aa23.98■■□□□ 1.43
MBD3-206ENST00000589901 POGKQ9P215 609 aa23.96■■□□□ 1.43
MBD3-206ENST00000589901 KDM2AQ9Y2K7 1162 aa23.96■■□□□ 1.43
MBD3-206ENST00000589901 KIF1AQ12756 1690 aa23.95■■□□□ 1.43
MBD3-206ENST00000589901 DCAF11Q8TEB1 546 aa23.93■■□□□ 1.42
MBD3-206ENST00000589901 TRAK1Q9UPV9 953 aa23.93■■□□□ 1.42
MBD3-206ENST00000589901 ADGRB1O14514 1584 aa23.93■■□□□ 1.42
MBD3-206ENST00000589901 DLC1Q96QB1 1528 aa23.93■■□□□ 1.42
MBD3-206ENST00000589901 ATAD2Q6PL18 1390 aa23.91■■□□□ 1.42
MBD3-206ENST00000589901 PSME1Q06323 249 aa23.91■■□□□ 1.42
MBD3-206ENST00000589901 HIRIP3Q9BW71 556 aaPredicted RBP23.91■■□□□ 1.42
MBD3-206ENST00000589901 PLEKHG5O94827 1062 aa23.9■■□□□ 1.42
MBD3-206ENST00000589901 PMFBP1Q8TBY8 1022 aa23.9■■□□□ 1.42
MBD3-206ENST00000589901 CABLES1Q8TDN4 633 aa23.9■■□□□ 1.42
MBD3-206ENST00000589901 GJD4Q96KN9 370 aaPredicted RBP23.9■■□□□ 1.42
MBD3-206ENST00000589901 TNS3Q68CZ2 1445 aa23.9■■□□□ 1.42
MBD3-206ENST00000589901 RGPD8O14715 1765 aaPredicted RBP23.89■■□□□ 1.42
MBD3-206ENST00000589901 HRCP23327 699 aa23.89■■□□□ 1.41
MBD3-206ENST00000589901 MARF1Q9Y4F3 1742 aaKnown RBP23.89■■□□□ 1.41
MBD3-206ENST00000589901 EP400Q96L91 3159 aa23.88■■□□□ 1.41
MBD3-206ENST00000589901 HAP1P54257 671 aaPredicted RBP23.87■■□□□ 1.41
MBD3-206ENST00000589901 LMOD2Q6P5Q4 547 aa23.87■■□□□ 1.41
MBD3-206ENST00000589901 UNC5CLQ8IV45 518 aa23.87■■□□□ 1.41
MBD3-206ENST00000589901 SLIT2O94813 1529 aa23.87■■□□□ 1.41
MBD3-206ENST00000589901 SBNO1A3KN83 1393 aa23.87■■□□□ 1.41
MBD3-206ENST00000589901 MINK1Q8N4C8 1332 aaPredicted RBP23.86■■□□□ 1.41
MBD3-206ENST00000589901 ANKARQ7Z5J8 1434 aa23.86■■□□□ 1.41
MBD3-206ENST00000589901 USP32Q8NFA0 1604 aa23.85■■□□□ 1.41
MBD3-206ENST00000589901 ADGRB2O60241 1585 aa23.84■■□□□ 1.41
MBD3-206ENST00000589901 PRR36Q9H6K5 1346 aa23.84■■□□□ 1.41
MBD3-206ENST00000589901 STAC3Q96MF2 364 aa23.83■■□□□ 1.41
MBD3-206ENST00000589901 RALGAPBQ86X10 1494 aa23.82■■□□□ 1.4
MBD3-206ENST00000589901 ARHGEF10O15013 1369 aa23.82■■□□□ 1.4
MBD3-206ENST00000589901 WASLO00401 505 aaPredicted RBP23.81■■□□□ 1.4
MBD3-206ENST00000589901 SRCAPQ6ZRS2 3230 aa23.81■■□□□ 1.4
MBD3-206ENST00000589901 GLI3P10071 1580 aa23.8■■□□□ 1.4
MBD3-206ENST00000589901 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.8■■□□□ 1.4
MBD3-206ENST00000589901 EIF3AQ14152 1382 aaKnown RBP23.78■■□□□ 1.4
MBD3-206ENST00000589901 TULP4Q9NRJ4 1543 aa23.77■■□□□ 1.4
MBD3-206ENST00000589901 FAM83GA6ND36 823 aa23.76■■□□□ 1.39
MBD3-206ENST00000589901 VPS72Q15906 364 aa23.76■■□□□ 1.39
MBD3-206ENST00000589901 GPRASP1Q5JY77 1395 aa23.76■■□□□ 1.39
MBD3-206ENST00000589901 CCDC9Q9Y3X0 531 aaKnown RBP23.74■■□□□ 1.39
MBD3-206ENST00000589901 ABCA3Q99758 1704 aa23.73■■□□□ 1.39
MBD3-206ENST00000589901 SEPT12Q8IYM1 358 aa23.73■■□□□ 1.39
MBD3-206ENST00000589901 NGDNQ8NEJ9 315 aaKnown RBP23.73■■□□□ 1.39
MBD3-206ENST00000589901 TRPM3Q9HCF6 1732 aaPredicted RBP23.73■■□□□ 1.39
MBD3-206ENST00000589901 CCDC125Q86Z20 511 aa23.72■■□□□ 1.39
MBD3-206ENST00000589901 PLCH1Q4KWH8 1693 aa23.71■■□□□ 1.39
MBD3-206ENST00000589901 PAK3O75914 559 aaPredicted RBP23.7■■□□□ 1.38
MBD3-206ENST00000589901 NUDT16Q96DE0 195 aaKnown RBP23.7■■□□□ 1.38
MBD3-206ENST00000589901 ONECUT3O60422 494 aaPredicted RBP23.69■■□□□ 1.38
MBD3-206ENST00000589901 BTG4Q9NY30 223 aa23.69■■□□□ 1.38
MBD3-206ENST00000589901 ARHGEF28Q8N1W1 1705 aaKnown RBP23.69■■□□□ 1.38
MBD3-206ENST00000589901 ATP7BP35670 1465 aa23.68■■□□□ 1.38
MBD3-206ENST00000589901 NWD2Q9ULI1 1742 aa23.68■■□□□ 1.38
MBD3-206ENST00000589901 ALS2Q96Q42 1657 aa23.68■■□□□ 1.38
MBD3-206ENST00000589901 CDK19Q9BWU1 502 aa23.67■■□□□ 1.38
MBD3-206ENST00000589901 NBPF1Q3BBV0 1214 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 196.8 ms