RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 PTCH1Q13635 1447 aa19.44■□□□□ 0.7
NLE1-205ENST00000588642 CPS1P31327 1500 aa19.44■□□□□ 0.7
NLE1-205ENST00000588642 SRPK2P78362 688 aaKnown RBP19.43■□□□□ 0.7
NLE1-205ENST00000588642 PROSER2Q86WR7 435 aaPredicted RBP19.43■□□□□ 0.7
NLE1-205ENST00000588642 CDK19Q9BWU1 502 aa19.43■□□□□ 0.7
NLE1-205ENST00000588642 CABP2Q9NPB3 220 aa19.42■□□□□ 0.7
NLE1-205ENST00000588642 QRICH2Q9H0J4 1663 aa19.42■□□□□ 0.7
NLE1-205ENST00000588642 PUS7Q96PZ0 661 aaKnown RBP19.41■□□□□ 0.7
NLE1-205ENST00000588642 KNDC1Q76NI1 1749 aa19.41■□□□□ 0.7
NLE1-205ENST00000588642 STRCQ7RTU9 1775 aa19.4■□□□□ 0.7
NLE1-205ENST00000588642 WASLO00401 505 aaPredicted RBP19.4■□□□□ 0.7
NLE1-205ENST00000588642 C14orf37Q86TY3 774 aa19.39■□□□□ 0.69
NLE1-205ENST00000588642 RBM33Q96EV2 1170 aaKnown RBP19.39■□□□□ 0.69
NLE1-205ENST00000588642 XRN1Q8IZH2 1706 aaKnown RBP19.39■□□□□ 0.69
NLE1-205ENST00000588642 TMC1Q8TDI8 760 aa19.37■□□□□ 0.69
NLE1-205ENST00000588642 CHD2O14647 1828 aaKnown RBP19.37■□□□□ 0.69
NLE1-205ENST00000588642 TULP4Q9NRJ4 1543 aa19.36■□□□□ 0.69
NLE1-205ENST00000588642 ZNF335Q9H4Z2 1342 aaPredicted RBP19.34■□□□□ 0.69
NLE1-205ENST00000588642 PANK3Q9H999 370 aa19.34■□□□□ 0.69
NLE1-205ENST00000588642 ATAD2Q6PL18 1390 aa19.33■□□□□ 0.69
NLE1-205ENST00000588642 NWD1Q149M9 1564 aa19.33■□□□□ 0.69
NLE1-205ENST00000588642 NUDT16Q96DE0 195 aaKnown RBP19.33■□□□□ 0.68
NLE1-205ENST00000588642 SLC12A5Q9H2X9 1139 aa19.33■□□□□ 0.68
NLE1-205ENST00000588642 NKTRP30414 1462 aaKnown RBP19.33■□□□□ 0.68
NLE1-205ENST00000588642 NUTM2FA1L443 756 aa19.31■□□□□ 0.68
NLE1-205ENST00000588642 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.31■□□□□ 0.68
NLE1-205ENST00000588642 TMEM94Q12767 1356 aa19.3■□□□□ 0.68
NLE1-205ENST00000588642 CABP1Q9NZU7 370 aa19.29■□□□□ 0.68
NLE1-205ENST00000588642 CCDC61Q9Y6R9 512 aa19.29■□□□□ 0.68
NLE1-205ENST00000588642 ADGRL3Q9HAR2 1447 aa19.28■□□□□ 0.68
NLE1-205ENST00000588642 C19orf44Q9H6X5 657 aa19.28■□□□□ 0.68
NLE1-205ENST00000588642 NINLQ9Y2I6 1382 aa19.27■□□□□ 0.68
NLE1-205ENST00000588642 ADGRB2O60241 1585 aa19.27■□□□□ 0.67
NLE1-205ENST00000588642 PRR36Q9H6K5 1346 aa19.26■□□□□ 0.67
NLE1-205ENST00000588642 NCOA3Q9Y6Q9 1424 aa19.26■□□□□ 0.67
NLE1-205ENST00000588642 TERF2IPQ9NYB0 399 aa19.26■□□□□ 0.67
NLE1-205ENST00000588642 ANP32CO43423 234 aa19.25■□□□□ 0.67
NLE1-205ENST00000588642 ATF3P18847 181 aa19.25■□□□□ 0.67
NLE1-205ENST00000588642 HDGFL2Q7Z4V5 671 aaPredicted RBP19.25■□□□□ 0.67
NLE1-205ENST00000588642 KNSTRNQ9Y448 316 aa19.25■□□□□ 0.67
NLE1-205ENST00000588642 PER1O15534 1290 aaPredicted RBP19.23■□□□□ 0.67
NLE1-205ENST00000588642 CNGB1Q14028 1251 aaPredicted RBP19.23■□□□□ 0.67
NLE1-205ENST00000588642 PPIP5K1Q6PFW1 1433 aa19.23■□□□□ 0.67
NLE1-205ENST00000588642 MIER1Q8N108 512 aa19.22■□□□□ 0.67
NLE1-205ENST00000588642 CARD14Q9BXL6 1004 aa19.22■□□□□ 0.67
NLE1-205ENST00000588642 STRCP1A6NGW2 1772 aa19.21■□□□□ 0.67
NLE1-205ENST00000588642 MSH6P52701 1360 aa19.21■□□□□ 0.67
NLE1-205ENST00000588642 ANKRD36BQ8N2N9 1353 aa19.21■□□□□ 0.67
NLE1-205ENST00000588642 LRRC7Q96NW7 1537 aa19.21■□□□□ 0.67
NLE1-205ENST00000588642 PLEKHG3A1L390 1219 aa19.21■□□□□ 0.67
NLE1-205ENST00000588642 ANKARQ7Z5J8 1434 aa19.2■□□□□ 0.66
NLE1-205ENST00000588642 CADPS2Q86UW7 1296 aa19.2■□□□□ 0.66
NLE1-205ENST00000588642 ATP7BP35670 1465 aa19.2■□□□□ 0.66
NLE1-205ENST00000588642 PMFBP1Q8TBY8 1022 aa19.19■□□□□ 0.66
NLE1-205ENST00000588642 CDC42BPGQ6DT37 1551 aa19.19■□□□□ 0.66
NLE1-205ENST00000588642 NALCNQ8IZF0 1738 aa19.18■□□□□ 0.66
NLE1-205ENST00000588642 ESCO1Q5FWF5 840 aa19.18■□□□□ 0.66
NLE1-205ENST00000588642 NGDNQ8NEJ9 315 aaKnown RBP19.18■□□□□ 0.66
NLE1-205ENST00000588642 ZNF692Q9BU19 519 aaPredicted RBP19.18■□□□□ 0.66
NLE1-205ENST00000588642 A0A1W2PP64 1363 aa19.18■□□□□ 0.66
NLE1-205ENST00000588642 CC2D1BQ5T0F9 858 aaKnown RBP19.17■□□□□ 0.66
NLE1-205ENST00000588642 PHF8Q9UPP1 1060 aa19.17■□□□□ 0.66
NLE1-205ENST00000588642 ACEP12821 1306 aa19.17■□□□□ 0.66
NLE1-205ENST00000588642 MYOM1P52179 1685 aa19.17■□□□□ 0.66
NLE1-205ENST00000588642 KTN1Q86UP2 1357 aaKnown RBP19.16■□□□□ 0.66
NLE1-205ENST00000588642 NSD3Q9BZ95 1437 aa19.16■□□□□ 0.66
NLE1-205ENST00000588642 DCCP43146 1447 aa19.15■□□□□ 0.66
NLE1-205ENST00000588642 AMER1Q5JTC6 1135 aaPredicted RBP19.14■□□□□ 0.65
NLE1-205ENST00000588642 PRKRIP1Q9H875 184 aaPredicted RBP19.14■□□□□ 0.65
NLE1-205ENST00000588642 CGNL1Q0VF96 1302 aa19.14■□□□□ 0.65
NLE1-205ENST00000588642 CD163L1Q9NR16 1453 aa19.14■□□□□ 0.65
NLE1-205ENST00000588642 ORAI2Q96SN7 254 aa19.13■□□□□ 0.65
NLE1-205ENST00000588642 FMN2Q9NZ56 1722 aa19.13■□□□□ 0.65
NLE1-205ENST00000588642 C1orf167Q5SNV9 1468 aa19.12■□□□□ 0.65
NLE1-205ENST00000588642 CPSF1Q10570 1443 aaKnown RBP19.12■□□□□ 0.65
NLE1-205ENST00000588642 USP32Q8NFA0 1604 aa19.11■□□□□ 0.65
NLE1-205ENST00000588642 RALBP1Q15311 655 aa19.11■□□□□ 0.65
NLE1-205ENST00000588642 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.11■□□□□ 0.65
NLE1-205ENST00000588642 SLAIN2Q9P270 581 aa19.1■□□□□ 0.65
NLE1-205ENST00000588642 LTBP4Q8N2S1 1624 aa19.1■□□□□ 0.65
NLE1-205ENST00000588642 MST1RQ04912 1400 aa19.09■□□□□ 0.65
NLE1-205ENST00000588642 POLR3AO14802 1390 aaPredicted RBP19.09■□□□□ 0.65
NLE1-205ENST00000588642 NPC1L1Q9UHC9 1359 aa19.09■□□□□ 0.65
NLE1-205ENST00000588642 PSME1Q06323 249 aa19.09■□□□□ 0.65
NLE1-205ENST00000588642 MORC1Q86VD1 984 aa19.08■□□□□ 0.64
NLE1-205ENST00000588642 EDC4Q6P2E9 1401 aaKnown RBP19.08■□□□□ 0.64
NLE1-205ENST00000588642 TTC21BQ7Z4L5 1316 aa19.07■□□□□ 0.64
NLE1-205ENST00000588642 FYB1O15117 783 aa19.07■□□□□ 0.64
NLE1-205ENST00000588642 FOXO3O43524 673 aa19.07■□□□□ 0.64
NLE1-205ENST00000588642 TOPAZ1Q8N9V7 1692 aa19.06■□□□□ 0.64
NLE1-205ENST00000588642 GGNBP2Q9H3C7 697 aa19.06■□□□□ 0.64
NLE1-205ENST00000588642 USP6P35125 1406 aa19.05■□□□□ 0.64
NLE1-205ENST00000588642 NSD2O96028 1365 aa19.05■□□□□ 0.64
NLE1-205ENST00000588642 PAK3O75914 559 aaPredicted RBP19.04■□□□□ 0.64
NLE1-205ENST00000588642 ITSN1Q15811 1721 aa19.04■□□□□ 0.64
NLE1-205ENST00000588642 NME9Q86XW9 330 aa19.04■□□□□ 0.64
NLE1-205ENST00000588642 XIRP1Q702N8 1843 aaKnown RBP19.04■□□□□ 0.64
NLE1-205ENST00000588642 PARD3Q8TEW0 1356 aa19.04■□□□□ 0.64
NLE1-205ENST00000588642 CCER2I3L3R5 266 aa19.03■□□□□ 0.64
NLE1-205ENST00000588642 KRT28Q7Z3Y7 464 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms