RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 HFM1A2PYH4 1435 aa23.19■■□□□ 1.3
IFT20-216ENST00000588477 PRAG1Q86YV5 1406 aa23.18■■□□□ 1.3
IFT20-216ENST00000588477 ESCO1Q5FWF5 840 aa23.18■■□□□ 1.3
IFT20-216ENST00000588477 ZRANB1Q9UGI0 708 aa23.17■■□□□ 1.3
IFT20-216ENST00000588477 MYOM2P54296 1465 aa23.17■■□□□ 1.3
IFT20-216ENST00000588477 NAIPQ13075 1403 aa23.16■■□□□ 1.3
IFT20-216ENST00000588477 RPGRIP1LQ68CZ1 1315 aa23.16■■□□□ 1.3
IFT20-216ENST00000588477 NPHP3Q7Z494 1330 aa23.16■■□□□ 1.3
IFT20-216ENST00000588477 FOXD1Q16676 465 aa23.16■■□□□ 1.3
IFT20-216ENST00000588477 CDC42BPGQ6DT37 1551 aa23.15■■□□□ 1.3
IFT20-216ENST00000588477 BCL9LQ86UU0 1499 aa23.15■■□□□ 1.3
IFT20-216ENST00000588477 PXDNQ92626 1479 aa23.15■■□□□ 1.3
IFT20-216ENST00000588477 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.13■■□□□ 1.29
IFT20-216ENST00000588477 FOXO3O43524 673 aa23.13■■□□□ 1.29
IFT20-216ENST00000588477 XPCQ01831 940 aaPredicted RBP23.13■■□□□ 1.29
IFT20-216ENST00000588477 BRWD3Q6RI45 1802 aa23.12■■□□□ 1.29
IFT20-216ENST00000588477 CCDC125Q86Z20 511 aa23.11■■□□□ 1.29
IFT20-216ENST00000588477 GJD4Q96KN9 370 aaPredicted RBP23.11■■□□□ 1.29
IFT20-216ENST00000588477 NUTM2FA1L443 756 aa23.1■■□□□ 1.29
IFT20-216ENST00000588477 SLC4A1APQ9BWU0 796 aaKnown RBP23.09■■□□□ 1.29
IFT20-216ENST00000588477 RGPD8O14715 1765 aaPredicted RBP23.08■■□□□ 1.29
IFT20-216ENST00000588477 LRPPRCP42704 1394 aaKnown RBP23.07■■□□□ 1.28
IFT20-216ENST00000588477 RRBP1Q9P2E9 1410 aaKnown RBP23.07■■□□□ 1.28
IFT20-216ENST00000588477 FMN2Q9NZ56 1722 aa23.06■■□□□ 1.28
IFT20-216ENST00000588477 IFT172Q9UG01 1749 aa23.06■■□□□ 1.28
IFT20-216ENST00000588477 WAPLQ7Z5K2 1190 aa23.06■■□□□ 1.28
IFT20-216ENST00000588477 STK26Q9P289 416 aa23.06■■□□□ 1.28
IFT20-216ENST00000588477 GLI3P10071 1580 aa23.06■■□□□ 1.28
IFT20-216ENST00000588477 KNDC1Q76NI1 1749 aa23.05■■□□□ 1.28
IFT20-216ENST00000588477 ADGRF5Q8IZF2 1346 aa23.04■■□□□ 1.28
IFT20-216ENST00000588477 KIF1AQ12756 1690 aa23.03■■□□□ 1.28
IFT20-216ENST00000588477 UNC5CLQ8IV45 518 aa23.02■■□□□ 1.28
IFT20-216ENST00000588477 RALGAPBQ86X10 1494 aa23.02■■□□□ 1.28
IFT20-216ENST00000588477 SLIT2O94813 1529 aa23.01■■□□□ 1.27
IFT20-216ENST00000588477 USP32Q8NFA0 1604 aa23■■□□□ 1.27
IFT20-216ENST00000588477 TECPR2O15040 1411 aa23■■□□□ 1.27
IFT20-216ENST00000588477 RGL3Q3MIN7 710 aa23■■□□□ 1.27
IFT20-216ENST00000588477 SPATA31A3Q5VYP0 1347 aa23■■□□□ 1.27
IFT20-216ENST00000588477 TMEM132EQ6IEE7 984 aa22.99■■□□□ 1.27
IFT20-216ENST00000588477 PLEKHH1Q9ULM0 1364 aa22.99■■□□□ 1.27
IFT20-216ENST00000588477 BLMP54132 1417 aaPredicted RBP22.99■■□□□ 1.27
IFT20-216ENST00000588477 PLCH1Q4KWH8 1693 aa22.98■■□□□ 1.27
IFT20-216ENST00000588477 KRT28Q7Z3Y7 464 aa22.97■■□□□ 1.27
IFT20-216ENST00000588477 ABCC11Q96J66 1382 aa22.96■■□□□ 1.27
IFT20-216ENST00000588477 CCDC144AA2RUR9 1427 aa22.96■■□□□ 1.27
IFT20-216ENST00000588477 DEFB132Q7Z7B7 95 aa22.95■■□□□ 1.26
IFT20-216ENST00000588477 NWD2Q9ULI1 1742 aa22.95■■□□□ 1.26
IFT20-216ENST00000588477 HAP1P54257 671 aaPredicted RBP22.94■■□□□ 1.26
IFT20-216ENST00000588477 ABCA3Q99758 1704 aa22.94■■□□□ 1.26
IFT20-216ENST00000588477 ANKRD30BQ9BXX2 1392 aa22.93■■□□□ 1.26
IFT20-216ENST00000588477 PLEKHG5O94827 1062 aa22.93■■□□□ 1.26
IFT20-216ENST00000588477 SPATA31E1Q6ZUB1 1445 aa22.92■■□□□ 1.26
IFT20-216ENST00000588477 SF3B2Q13435 895 aaKnown RBP22.92■■□□□ 1.26
IFT20-216ENST00000588477 SEPT12Q8IYM1 358 aa22.92■■□□□ 1.26
IFT20-216ENST00000588477 CABLES1Q8TDN4 633 aa22.92■■□□□ 1.26
IFT20-216ENST00000588477 YTHDC2Q9H6S0 1430 aaKnown RBP22.91■■□□□ 1.26
IFT20-216ENST00000588477 PIK3C2GO75747 1445 aa22.91■■□□□ 1.26
IFT20-216ENST00000588477 TNS3Q68CZ2 1445 aa22.9■■□□□ 1.26
IFT20-216ENST00000588477 PSME1Q06323 249 aa22.89■■□□□ 1.25
IFT20-216ENST00000588477 VPS72Q15906 364 aa22.89■■□□□ 1.25
IFT20-216ENST00000588477 PHF8Q9UPP1 1060 aa22.89■■□□□ 1.25
IFT20-216ENST00000588477 CCDC9Q9Y3X0 531 aaKnown RBP22.89■■□□□ 1.25
IFT20-216ENST00000588477 LMOD2Q6P5Q4 547 aa22.87■■□□□ 1.25
IFT20-216ENST00000588477 LRP5O75197 1615 aa22.86■■□□□ 1.25
IFT20-216ENST00000588477 ONECUT3O60422 494 aaPredicted RBP22.85■■□□□ 1.25
IFT20-216ENST00000588477 KRT27Q7Z3Y8 459 aa22.85■■□□□ 1.25
IFT20-216ENST00000588477 SIRT1Q96EB6 747 aa22.85■■□□□ 1.25
IFT20-216ENST00000588477 MPHOSPH9Q99550 1183 aa22.84■■□□□ 1.25
IFT20-216ENST00000588477 NRXN1Q9ULB1 1477 aa22.84■■□□□ 1.25
IFT20-216ENST00000588477 NRAPQ86VF7 1730 aa22.83■■□□□ 1.25
IFT20-216ENST00000588477 SBNO1A3KN83 1393 aa22.82■■□□□ 1.24
IFT20-216ENST00000588477 A0A0G2JS52 829 aa22.81■■□□□ 1.24
IFT20-216ENST00000588477 FAM83GA6ND36 823 aa22.81■■□□□ 1.24
IFT20-216ENST00000588477 MYT1Q01538 1121 aa22.81■■□□□ 1.24
IFT20-216ENST00000588477 SAFB2Q14151 953 aaKnown RBP eCLIP22.81■■□□□ 1.24
IFT20-216ENST00000588477 C14orf93Q9H972 538 aaKnown RBP22.81■■□□□ 1.24
IFT20-216ENST00000588477 ARHGEF10O15013 1369 aa22.8■■□□□ 1.24
IFT20-216ENST00000588477 DHX57Q6P158 1386 aaKnown RBP22.8■■□□□ 1.24
IFT20-216ENST00000588477 CFAP70Q5T0N1 1121 aa22.79■■□□□ 1.24
IFT20-216ENST00000588477 PMFBP1Q8TBY8 1022 aa22.79■■□□□ 1.24
IFT20-216ENST00000588477 TRPM3Q9HCF6 1732 aaPredicted RBP22.79■■□□□ 1.24
IFT20-216ENST00000588477 PSDA5PKW4 1024 aaPredicted RBP22.78■■□□□ 1.24
IFT20-216ENST00000588477 RGPD1P0DJD0 1748 aa22.78■■□□□ 1.24
IFT20-216ENST00000588477 BAG6P46379 1132 aa22.78■■□□□ 1.24
IFT20-216ENST00000588477 PRAM1Q96QH2 718 aa22.78■■□□□ 1.24
IFT20-216ENST00000588477 COL14A1Q05707 1796 aaKnown RBP22.76■■□□□ 1.23
IFT20-216ENST00000588477 FAM98CQ17RN3 349 aaKnown RBP22.76■■□□□ 1.23
IFT20-216ENST00000588477 ALS2Q96Q42 1657 aa22.76■■□□□ 1.23
IFT20-216ENST00000588477 BTG4Q9NY30 223 aa22.75■■□□□ 1.23
IFT20-216ENST00000588477 POGKQ9P215 609 aa22.74■■□□□ 1.23
IFT20-216ENST00000588477 HRCP23327 699 aa22.72■■□□□ 1.23
IFT20-216ENST00000588477 ANKARQ7Z5J8 1434 aa22.72■■□□□ 1.23
IFT20-216ENST00000588477 DLC1Q96QB1 1528 aa22.72■■□□□ 1.23
IFT20-216ENST00000588477 ADGRB2O60241 1585 aa22.72■■□□□ 1.23
IFT20-216ENST00000588477 CRYBG1Q9Y4K1 1723 aa22.71■■□□□ 1.23
IFT20-216ENST00000588477 FAM182BQ5T319 152 aa22.71■■□□□ 1.23
IFT20-216ENST00000588477 EN1Q05925 392 aaPredicted RBP22.7■■□□□ 1.22
IFT20-216ENST00000588477 TNS1Q9HBL0 1735 aaKnown RBP22.69■■□□□ 1.22
IFT20-216ENST00000588477 HIRIP3Q9BW71 556 aaPredicted RBP22.68■■□□□ 1.22
IFT20-216ENST00000588477 GPRASP1Q5JY77 1395 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms