RNA–Protein interactions for RNA: ENST00000587834.5

SEC11C-204, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC11C, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-204ENST00000587834 STK26Q9P289 416 aa35.53■■■■□ 3.28
SEC11C-204ENST00000587834 ZNF772Q68DY9 489 aaPredicted RBP35.51■■■■□ 3.28
SEC11C-204ENST00000587834 MYOM2P54296 1465 aa35.51■■■■□ 3.28
SEC11C-204ENST00000587834 NRXN1Q9ULB1 1477 aa35.5■■■■□ 3.27
SEC11C-204ENST00000587834 TMEM132EQ6IEE7 984 aa35.5■■■■□ 3.27
SEC11C-204ENST00000587834 ABCC11Q96J66 1382 aa35.48■■■■□ 3.27
SEC11C-204ENST00000587834 PLEKHH1Q9ULM0 1364 aa35.48■■■■□ 3.27
SEC11C-204ENST00000587834 YTHDC2Q9H6S0 1430 aaKnown RBP35.48■■■■□ 3.27
SEC11C-204ENST00000587834 WAPLQ7Z5K2 1190 aa35.47■■■■□ 3.27
SEC11C-204ENST00000587834 FMN2Q9NZ56 1722 aa35.46■■■■□ 3.27
SEC11C-204ENST00000587834 SOS2Q07890 1332 aaPredicted RBP35.46■■■■□ 3.27
SEC11C-204ENST00000587834 AFF2P51816 1311 aa35.44■■■■□ 3.26
SEC11C-204ENST00000587834 COL22A1Q8NFW1 1626 aaPredicted RBP35.43■■■■□ 3.26
SEC11C-204ENST00000587834 PXDNQ92626 1479 aa35.4■■■■□ 3.26
SEC11C-204ENST00000587834 C8orf37Q96NL8 207 aa35.39■■■■□ 3.26
SEC11C-204ENST00000587834 ESCO1Q5FWF5 840 aa35.38■■■■□ 3.25
SEC11C-204ENST00000587834 C14orf93Q9H972 538 aaKnown RBP35.37■■■■□ 3.25
SEC11C-204ENST00000587834 NUTM2FA1L443 756 aa35.36■■■■□ 3.25
SEC11C-204ENST00000587834 CFAP70Q5T0N1 1121 aa35.35■■■■□ 3.25
SEC11C-204ENST00000587834 NPHP3Q7Z494 1330 aa35.34■■■■□ 3.25
SEC11C-204ENST00000587834 KIF1AQ12756 1690 aa35.34■■■■□ 3.25
SEC11C-204ENST00000587834 RGPD8O14715 1765 aaPredicted RBP35.34■■■■□ 3.25
SEC11C-204ENST00000587834 ADAMTS2O95450 1211 aa35.33■■■■□ 3.25
SEC11C-204ENST00000587834 RXRBP28702 533 aa35.32■■■■□ 3.24
SEC11C-204ENST00000587834 CDK12Q9NYV4 1490 aaPredicted RBP35.31■■■■□ 3.24
SEC11C-204ENST00000587834 DHX57Q6P158 1386 aaKnown RBP35.3■■■■□ 3.24
SEC11C-204ENST00000587834 MARF1Q9Y4F3 1742 aaKnown RBP35.29■■■■□ 3.24
SEC11C-204ENST00000587834 XPCQ01831 940 aaPredicted RBP35.29■■■■□ 3.24
SEC11C-204ENST00000587834 ADGRB1O14514 1584 aa35.29■■■■□ 3.24
SEC11C-204ENST00000587834 FOXO3O43524 673 aa35.28■■■■□ 3.24
SEC11C-204ENST00000587834 DLC1Q96QB1 1528 aa35.27■■■■□ 3.24
SEC11C-204ENST00000587834 SIRT1Q96EB6 747 aa35.26■■■■□ 3.24
SEC11C-204ENST00000587834 NGLY1Q96IV0 654 aa35.24■■■■□ 3.23
SEC11C-204ENST00000587834 RGS12O14924 1447 aa35.23■■■■□ 3.23
SEC11C-204ENST00000587834 SAFB2Q14151 953 aaKnown RBP eCLIP35.21■■■■□ 3.23
SEC11C-204ENST00000587834 PRAM1Q96QH2 718 aa35.21■■■■□ 3.23
SEC11C-204ENST00000587834 QTRT2Q9H974 415 aaKnown RBP35.21■■■■□ 3.23
SEC11C-204ENST00000587834 ADGRB2O60241 1585 aa35.21■■■■□ 3.23
SEC11C-204ENST00000587834 USP32Q8NFA0 1604 aa35.19■■■■□ 3.22
SEC11C-204ENST00000587834 HRCP23327 699 aa35.18■■■■□ 3.22
SEC11C-204ENST00000587834 RBM6P78332 1123 aaKnown RBP35.16■■■■□ 3.22
SEC11C-204ENST00000587834 KDM2AQ9Y2K7 1162 aa35.16■■■■□ 3.22
SEC11C-204ENST00000587834 DCAF11Q8TEB1 546 aa35.15■■■■□ 3.22
SEC11C-204ENST00000587834 UPF1Q92900 1129 aaKnown RBP eCLIP35.15■■■■□ 3.22
SEC11C-204ENST00000587834 USP21Q9UK80 565 aa35.13■■■■□ 3.21
SEC11C-204ENST00000587834 POGKQ9P215 609 aa35.12■■■■□ 3.21
SEC11C-204ENST00000587834 SPATA31A3Q5VYP0 1347 aa35.1■■■■□ 3.21
SEC11C-204ENST00000587834 ARHGEF28Q8N1W1 1705 aaKnown RBP35.1■■■■□ 3.21
SEC11C-204ENST00000587834 FNBP4Q8N3X1 1017 aaPredicted RBP35.1■■■■□ 3.21
SEC11C-204ENST00000587834 PHF8Q9UPP1 1060 aa35.1■■■■□ 3.21
SEC11C-204ENST00000587834 TRAK1Q9UPV9 953 aa35.1■■■■□ 3.21
SEC11C-204ENST00000587834 ATRNO75882 1429 aa35.09■■■■□ 3.21
SEC11C-204ENST00000587834 ABCA3Q99758 1704 aa35.09■■■■□ 3.21
SEC11C-204ENST00000587834 TNS3Q68CZ2 1445 aa35.07■■■■□ 3.21
SEC11C-204ENST00000587834 ANKARQ7Z5J8 1434 aa35.07■■■■□ 3.21
SEC11C-204ENST00000587834 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.07■■■■□ 3.2
SEC11C-204ENST00000587834 KRT28Q7Z3Y7 464 aa35.07■■■■□ 3.2
SEC11C-204ENST00000587834 BCL9LQ86UU0 1499 aa35.05■■■■□ 3.2
SEC11C-204ENST00000587834 TRPC5Q9UL62 973 aaPredicted RBP35.05■■■■□ 3.2
SEC11C-204ENST00000587834 HIRIP3Q9BW71 556 aaPredicted RBP35.04■■■■□ 3.2
SEC11C-204ENST00000587834 TRPM3Q9HCF6 1732 aaPredicted RBP35.01■■■■□ 3.2
SEC11C-204ENST00000587834 STAC3Q96MF2 364 aa35.01■■■■□ 3.2
SEC11C-204ENST00000587834 MINK1Q8N4C8 1332 aaPredicted RBP35.01■■■■□ 3.19
SEC11C-204ENST00000587834 TULP4Q9NRJ4 1543 aa35.01■■■■□ 3.19
SEC11C-204ENST00000587834 SBNO1A3KN83 1393 aa34.98■■■■□ 3.19
SEC11C-204ENST00000587834 PSME1Q06323 249 aa34.97■■■■□ 3.19
SEC11C-204ENST00000587834 PMFBP1Q8TBY8 1022 aa34.97■■■■□ 3.19
SEC11C-204ENST00000587834 PLCH1Q4KWH8 1693 aa34.97■■■■□ 3.19
SEC11C-204ENST00000587834 KIAA1210Q9ULL0 1709 aa34.97■■■■□ 3.19
SEC11C-204ENST00000587834 SLIT2O94813 1529 aa34.96■■■■□ 3.19
SEC11C-204ENST00000587834 PRR36Q9H6K5 1346 aa34.95■■■■□ 3.19
SEC11C-204ENST00000587834 EIF3AQ14152 1382 aaKnown RBP34.94■■■■□ 3.18
SEC11C-204ENST00000587834 ALS2Q96Q42 1657 aa34.94■■■■□ 3.18
SEC11C-204ENST00000587834 ITSN1Q15811 1721 aa34.94■■■■□ 3.18
SEC11C-204ENST00000587834 PLEKHG5O94827 1062 aa34.92■■■■□ 3.18
SEC11C-204ENST00000587834 CABLES1Q8TDN4 633 aa34.92■■■■□ 3.18
SEC11C-204ENST00000587834 ARHGEF10O15013 1369 aa34.91■■■■□ 3.18
SEC11C-204ENST00000587834 GLI3P10071 1580 aa34.91■■■■□ 3.18
SEC11C-204ENST00000587834 LMOD2Q6P5Q4 547 aa34.9■■■■□ 3.18
SEC11C-204ENST00000587834 NWD2Q9ULI1 1742 aa34.89■■■■□ 3.18
SEC11C-204ENST00000587834 ATAD2Q6PL18 1390 aa34.89■■■■□ 3.18
SEC11C-204ENST00000587834 WASLO00401 505 aaPredicted RBP34.89■■■■□ 3.18
SEC11C-204ENST00000587834 HAP1P54257 671 aaPredicted RBP34.89■■■■□ 3.18
SEC11C-204ENST00000587834 ATP7BP35670 1465 aa34.87■■■■□ 3.17
SEC11C-204ENST00000587834 RALGAPBQ86X10 1494 aa34.86■■■■□ 3.17
SEC11C-204ENST00000587834 UNC5CLQ8IV45 518 aa34.86■■■■□ 3.17
SEC11C-204ENST00000587834 GJD4Q96KN9 370 aaPredicted RBP34.85■■■■□ 3.17
SEC11C-204ENST00000587834 CRYBG1Q9Y4K1 1723 aa34.85■■■■□ 3.17
SEC11C-204ENST00000587834 EP400Q96L91 3159 aa34.84■■■■□ 3.17
SEC11C-204ENST00000587834 TOPAZ1Q8N9V7 1692 aa34.84■■■■□ 3.17
SEC11C-204ENST00000587834 GPRASP1Q5JY77 1395 aa34.83■■■■□ 3.17
SEC11C-204ENST00000587834 BRWD3Q6RI45 1802 aa34.81■■■■□ 3.16
SEC11C-204ENST00000587834 NRAPQ86VF7 1730 aa34.81■■■■□ 3.16
SEC11C-204ENST00000587834 NGDNQ8NEJ9 315 aaKnown RBP34.75■■■■□ 3.15
SEC11C-204ENST00000587834 NBPF1Q3BBV0 1214 aa34.74■■■■□ 3.15
SEC11C-204ENST00000587834 COL14A1Q05707 1796 aaKnown RBP34.74■■■■□ 3.15
SEC11C-204ENST00000587834 NUDT16Q96DE0 195 aaKnown RBP34.73■■■■□ 3.15
SEC11C-204ENST00000587834 QRICH2Q9H0J4 1663 aa34.72■■■■□ 3.15
SEC11C-204ENST00000587834 PHRF1Q9P1Y6 1649 aaKnown RBP34.7■■■■□ 3.15
SEC11C-204ENST00000587834 FAM83GA6ND36 823 aa34.7■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms