RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 ESCO1Q5FWF5 840 aa21.04■□□□□ 0.96
DNMT1-213ENST00000587604 RGL3Q3MIN7 710 aa21.03■□□□□ 0.96
DNMT1-213ENST00000587604 NPHP3Q7Z494 1330 aa21.03■□□□□ 0.96
DNMT1-213ENST00000587604 ANKRD30BQ9BXX2 1392 aa21.02■□□□□ 0.96
DNMT1-213ENST00000587604 FNBP4Q8N3X1 1017 aaPredicted RBP21.02■□□□□ 0.96
DNMT1-213ENST00000587604 MPHOSPH9Q99550 1183 aa21.02■□□□□ 0.96
DNMT1-213ENST00000587604 USP21Q9UK80 565 aa21.02■□□□□ 0.96
DNMT1-213ENST00000587604 SPATA31E1Q6ZUB1 1445 aa21.02■□□□□ 0.96
DNMT1-213ENST00000587604 CDC42BPGQ6DT37 1551 aa21.02■□□□□ 0.95
DNMT1-213ENST00000587604 STK26Q9P289 416 aa21.01■□□□□ 0.95
DNMT1-213ENST00000587604 TRPC5Q9UL62 973 aaPredicted RBP21.01■□□□□ 0.95
DNMT1-213ENST00000587604 COL22A1Q8NFW1 1626 aaPredicted RBP21■□□□□ 0.95
DNMT1-213ENST00000587604 WAPLQ7Z5K2 1190 aa21■□□□□ 0.95
DNMT1-213ENST00000587604 LRPPRCP42704 1394 aaKnown RBP20.99■□□□□ 0.95
DNMT1-213ENST00000587604 TECPR2O15040 1411 aa20.99■□□□□ 0.95
DNMT1-213ENST00000587604 FOXO3O43524 673 aa20.99■□□□□ 0.95
DNMT1-213ENST00000587604 ABCC11Q96J66 1382 aa20.98■□□□□ 0.95
DNMT1-213ENST00000587604 IFT172Q9UG01 1749 aa20.98■□□□□ 0.95
DNMT1-213ENST00000587604 PXDNQ92626 1479 aa20.97■□□□□ 0.95
DNMT1-213ENST00000587604 TMEM132EQ6IEE7 984 aa20.97■□□□□ 0.95
DNMT1-213ENST00000587604 MYOM2P54296 1465 aa20.95■□□□□ 0.94
DNMT1-213ENST00000587604 NUTM2FA1L443 756 aa20.94■□□□□ 0.94
DNMT1-213ENST00000587604 XPCQ01831 940 aaPredicted RBP20.94■□□□□ 0.94
DNMT1-213ENST00000587604 PIK3C2GO75747 1445 aa20.94■□□□□ 0.94
DNMT1-213ENST00000587604 ATRNO75882 1429 aa20.94■□□□□ 0.94
DNMT1-213ENST00000587604 KNDC1Q76NI1 1749 aa20.93■□□□□ 0.94
DNMT1-213ENST00000587604 ACIN1Q9UKV3 1341 aaKnown RBP20.93■□□□□ 0.94
DNMT1-213ENST00000587604 ATAD2Q6PL18 1390 aa20.93■□□□□ 0.94
DNMT1-213ENST00000587604 PLEKHH1Q9ULM0 1364 aa20.93■□□□□ 0.94
DNMT1-213ENST00000587604 SIRT1Q96EB6 747 aa20.92■□□□□ 0.94
DNMT1-213ENST00000587604 MARF1Q9Y4F3 1742 aaKnown RBP20.92■□□□□ 0.94
DNMT1-213ENST00000587604 YTHDC2Q9H6S0 1430 aaKnown RBP20.91■□□□□ 0.94
DNMT1-213ENST00000587604 BCL9LQ86UU0 1499 aa20.9■□□□□ 0.94
DNMT1-213ENST00000587604 C14orf93Q9H972 538 aaKnown RBP20.9■□□□□ 0.94
DNMT1-213ENST00000587604 FMN2Q9NZ56 1722 aa20.89■□□□□ 0.93
DNMT1-213ENST00000587604 SPATA31A3Q5VYP0 1347 aa20.87■□□□□ 0.93
DNMT1-213ENST00000587604 KIF1AQ12756 1690 aa20.86■□□□□ 0.93
DNMT1-213ENST00000587604 GJD4Q96KN9 370 aaPredicted RBP20.86■□□□□ 0.93
DNMT1-213ENST00000587604 KRT28Q7Z3Y7 464 aa20.85■□□□□ 0.93
DNMT1-213ENST00000587604 DHX57Q6P158 1386 aaKnown RBP20.85■□□□□ 0.93
DNMT1-213ENST00000587604 EP400Q96L91 3159 aa20.84■□□□□ 0.93
DNMT1-213ENST00000587604 NRXN1Q9ULB1 1477 aa20.84■□□□□ 0.93
DNMT1-213ENST00000587604 CFAP70Q5T0N1 1121 aa20.84■□□□□ 0.93
DNMT1-213ENST00000587604 RGPD8O14715 1765 aaPredicted RBP20.84■□□□□ 0.93
DNMT1-213ENST00000587604 UNC5CLQ8IV45 518 aa20.83■□□□□ 0.93
DNMT1-213ENST00000587604 PSME1Q06323 249 aa20.82■□□□□ 0.92
DNMT1-213ENST00000587604 CCDC125Q86Z20 511 aa20.82■□□□□ 0.92
DNMT1-213ENST00000587604 PHF8Q9UPP1 1060 aa20.82■□□□□ 0.92
DNMT1-213ENST00000587604 SRCAPQ6ZRS2 3230 aa20.82■□□□□ 0.92
DNMT1-213ENST00000587604 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.81■□□□□ 0.92
DNMT1-213ENST00000587604 SLIT2O94813 1529 aa20.81■□□□□ 0.92
DNMT1-213ENST00000587604 PRAM1Q96QH2 718 aa20.8■□□□□ 0.92
DNMT1-213ENST00000587604 SAFB2Q14151 953 aaKnown RBP eCLIP20.77■□□□□ 0.92
DNMT1-213ENST00000587604 USP32Q8NFA0 1604 aa20.77■□□□□ 0.92
DNMT1-213ENST00000587604 TNS3Q68CZ2 1445 aa20.77■□□□□ 0.91
DNMT1-213ENST00000587604 RALGAPBQ86X10 1494 aa20.76■□□□□ 0.91
DNMT1-213ENST00000587604 SBNO1A3KN83 1393 aa20.76■□□□□ 0.91
DNMT1-213ENST00000587604 HAP1P54257 671 aaPredicted RBP20.76■□□□□ 0.91
DNMT1-213ENST00000587604 POGKQ9P215 609 aa20.76■□□□□ 0.91
DNMT1-213ENST00000587604 CABLES1Q8TDN4 633 aa20.75■□□□□ 0.91
DNMT1-213ENST00000587604 ZRANB1Q9UGI0 708 aa20.75■□□□□ 0.91
DNMT1-213ENST00000587604 GLI3P10071 1580 aa20.75■□□□□ 0.91
DNMT1-213ENST00000587604 DLC1Q96QB1 1528 aa20.74■□□□□ 0.91
DNMT1-213ENST00000587604 ARHGEF10O15013 1369 aa20.72■□□□□ 0.91
DNMT1-213ENST00000587604 RAB3GAP2Q9H2M9 1393 aa20.72■□□□□ 0.91
DNMT1-213ENST00000587604 ANKARQ7Z5J8 1434 aa20.72■□□□□ 0.91
DNMT1-213ENST00000587604 VPS72Q15906 364 aa20.72■□□□□ 0.91
DNMT1-213ENST00000587604 LMOD2Q6P5Q4 547 aa20.72■□□□□ 0.91
DNMT1-213ENST00000587604 PMFBP1Q8TBY8 1022 aa20.71■□□□□ 0.91
DNMT1-213ENST00000587604 NWD2Q9ULI1 1742 aa20.7■□□□□ 0.9
DNMT1-213ENST00000587604 BRWD3Q6RI45 1802 aa20.7■□□□□ 0.9
DNMT1-213ENST00000587604 ONECUT3O60422 494 aaPredicted RBP20.7■□□□□ 0.9
DNMT1-213ENST00000587604 PLEKHG5O94827 1062 aa20.7■□□□□ 0.9
DNMT1-213ENST00000587604 ADGRB1O14514 1584 aa20.69■□□□□ 0.9
DNMT1-213ENST00000587604 ADGRB2O60241 1585 aa20.69■□□□□ 0.9
DNMT1-213ENST00000587604 SEPT12Q8IYM1 358 aa20.69■□□□□ 0.9
DNMT1-213ENST00000587604 TRAK1Q9UPV9 953 aa20.69■□□□□ 0.9
DNMT1-213ENST00000587604 BLMP54132 1417 aaPredicted RBP20.69■□□□□ 0.9
DNMT1-213ENST00000587604 FAM83GA6ND36 823 aa20.68■□□□□ 0.9
DNMT1-213ENST00000587604 PLCH1Q4KWH8 1693 aa20.67■□□□□ 0.9
DNMT1-213ENST00000587604 ABCA3Q99758 1704 aa20.67■□□□□ 0.9
DNMT1-213ENST00000587604 STAC3Q96MF2 364 aa20.67■□□□□ 0.9
DNMT1-213ENST00000587604 HIRIP3Q9BW71 556 aaPredicted RBP20.67■□□□□ 0.9
DNMT1-213ENST00000587604 KDM2AQ9Y2K7 1162 aa20.67■□□□□ 0.9
DNMT1-213ENST00000587604 CCDC9Q9Y3X0 531 aaKnown RBP20.67■□□□□ 0.9
DNMT1-213ENST00000587604 DCAF11Q8TEB1 546 aa20.66■□□□□ 0.9
DNMT1-213ENST00000587604 EIF3AQ14152 1382 aaKnown RBP20.65■□□□□ 0.9
DNMT1-213ENST00000587604 MINK1Q8N4C8 1332 aaPredicted RBP20.65■□□□□ 0.9
DNMT1-213ENST00000587604 GPRASP1Q5JY77 1395 aa20.64■□□□□ 0.89
DNMT1-213ENST00000587604 TRPM3Q9HCF6 1732 aaPredicted RBP20.64■□□□□ 0.89
DNMT1-213ENST00000587604 WASLO00401 505 aaPredicted RBP20.63■□□□□ 0.89
DNMT1-213ENST00000587604 SF3B2Q13435 895 aaKnown RBP20.63■□□□□ 0.89
DNMT1-213ENST00000587604 PRR36Q9H6K5 1346 aa20.62■□□□□ 0.89
DNMT1-213ENST00000587604 KRT27Q7Z3Y8 459 aa20.62■□□□□ 0.89
DNMT1-213ENST00000587604 HRCP23327 699 aa20.61■□□□□ 0.89
DNMT1-213ENST00000587604 DEFB132Q7Z7B7 95 aa20.61■□□□□ 0.89
DNMT1-213ENST00000587604 TULP4Q9NRJ4 1543 aa20.61■□□□□ 0.89
DNMT1-213ENST00000587604 ALS2Q96Q42 1657 aa20.61■□□□□ 0.89
DNMT1-213ENST00000587604 BTG4Q9NY30 223 aa20.6■□□□□ 0.89
DNMT1-213ENST00000587604 NGDNQ8NEJ9 315 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms