RNA–Protein interactions for RNA: ENST00000587425.5

TCF3-211, Transcript of transcription factor 3, humanhuman

TSL 2

Gene TCF3, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-211ENST00000587425 ADAMTS2O95450 1211 aa22.66■■□□□ 1.22
TCF3-211ENST00000587425 LAMC1P11047 1609 aa22.65■■□□□ 1.22
TCF3-211ENST00000587425 PIK3C2GO75747 1445 aa22.65■■□□□ 1.22
TCF3-211ENST00000587425 CDC42BPGQ6DT37 1551 aa22.64■■□□□ 1.22
TCF3-211ENST00000587425 RXRBP28702 533 aa22.64■■□□□ 1.21
TCF3-211ENST00000587425 ESCO1Q5FWF5 840 aa22.64■■□□□ 1.21
TCF3-211ENST00000587425 LRPPRCP42704 1394 aaKnown RBP22.63■■□□□ 1.21
TCF3-211ENST00000587425 SOS2Q07890 1332 aaPredicted RBP22.63■■□□□ 1.21
TCF3-211ENST00000587425 XPCQ01831 940 aaPredicted RBP22.63■■□□□ 1.21
TCF3-211ENST00000587425 RAB3GAP2Q9H2M9 1393 aa22.63■■□□□ 1.21
TCF3-211ENST00000587425 TECPR2O15040 1411 aa22.61■■□□□ 1.21
TCF3-211ENST00000587425 KNDC1Q76NI1 1749 aa22.61■■□□□ 1.21
TCF3-211ENST00000587425 YTHDC2Q9H6S0 1430 aaKnown RBP22.59■■□□□ 1.21
TCF3-211ENST00000587425 NGLY1Q96IV0 654 aa22.58■■□□□ 1.21
TCF3-211ENST00000587425 ABCC11Q96J66 1382 aa22.58■■□□□ 1.21
TCF3-211ENST00000587425 FOXO3O43524 673 aa22.57■■□□□ 1.2
TCF3-211ENST00000587425 CFAP70Q5T0N1 1121 aa22.57■■□□□ 1.2
TCF3-211ENST00000587425 QTRT2Q9H974 415 aaKnown RBP22.57■■□□□ 1.2
TCF3-211ENST00000587425 PXDNQ92626 1479 aa22.56■■□□□ 1.2
TCF3-211ENST00000587425 UPF1Q92900 1129 aaKnown RBP eCLIP22.55■■□□□ 1.21e-8■■■■□ 20.8
TCF3-211ENST00000587425 NPHP3Q7Z494 1330 aa22.55■■□□□ 1.2
TCF3-211ENST00000587425 FMN2Q9NZ56 1722 aa22.54■■□□□ 1.2
TCF3-211ENST00000587425 C14orf93Q9H972 538 aaKnown RBP22.54■■□□□ 1.2
TCF3-211ENST00000587425 RGS12O14924 1447 aa22.54■■□□□ 1.2
TCF3-211ENST00000587425 COL22A1Q8NFW1 1626 aaPredicted RBP22.53■■□□□ 1.2
TCF3-211ENST00000587425 SAFB2Q14151 953 aaKnown RBP eCLIP22.53■■□□□ 1.2
TCF3-211ENST00000587425 MYOM2P54296 1465 aa22.53■■□□□ 1.2
TCF3-211ENST00000587425 NRXN1Q9ULB1 1477 aa22.53■■□□□ 1.2
TCF3-211ENST00000587425 CDK12Q9NYV4 1490 aaPredicted RBP22.52■■□□□ 1.2
TCF3-211ENST00000587425 RGPD8O14715 1765 aaPredicted RBP22.5■■□□□ 1.19
TCF3-211ENST00000587425 RBM6P78332 1123 aaKnown RBP22.5■■□□□ 1.19
TCF3-211ENST00000587425 USP21Q9UK80 565 aa22.5■■□□□ 1.19
TCF3-211ENST00000587425 ACIN1Q9UKV3 1341 aaKnown RBP22.49■■□□□ 1.19
TCF3-211ENST00000587425 DHX57Q6P158 1386 aaKnown RBP22.49■■□□□ 1.19
TCF3-211ENST00000587425 PRAM1Q96QH2 718 aa22.48■■□□□ 1.19
TCF3-211ENST00000587425 KDM2AQ9Y2K7 1162 aa22.47■■□□□ 1.19
TCF3-211ENST00000587425 PLEKHG5O94827 1062 aa22.46■■□□□ 1.19
TCF3-211ENST00000587425 KIF1AQ12756 1690 aa22.45■■□□□ 1.18
TCF3-211ENST00000587425 SIRT1Q96EB6 747 aa22.44■■□□□ 1.18
TCF3-211ENST00000587425 MARF1Q9Y4F3 1742 aaKnown RBP22.44■■□□□ 1.18
TCF3-211ENST00000587425 KRT28Q7Z3Y7 464 aa22.43■■□□□ 1.18
TCF3-211ENST00000587425 FNBP4Q8N3X1 1017 aaPredicted RBP22.43■■□□□ 1.18
TCF3-211ENST00000587425 DCAF11Q8TEB1 546 aa22.42■■□□□ 1.18
TCF3-211ENST00000587425 POGKQ9P215 609 aa22.42■■□□□ 1.18
TCF3-211ENST00000587425 TRPC5Q9UL62 973 aaPredicted RBP22.42■■□□□ 1.18
TCF3-211ENST00000587425 TRAK1Q9UPV9 953 aa22.42■■□□□ 1.18
TCF3-211ENST00000587425 ADGRB1O14514 1584 aa22.42■■□□□ 1.18
TCF3-211ENST00000587425 ATRNO75882 1429 aa22.41■■□□□ 1.18
TCF3-211ENST00000587425 SPATA31A3Q5VYP0 1347 aa22.41■■□□□ 1.18
TCF3-211ENST00000587425 HIRIP3Q9BW71 556 aaPredicted RBP22.41■■□□□ 1.18
TCF3-211ENST00000587425 PHF8Q9UPP1 1060 aa22.41■■□□□ 1.18
TCF3-211ENST00000587425 BCL9LQ86UU0 1499 aa22.39■■□□□ 1.17
TCF3-211ENST00000587425 USP32Q8NFA0 1604 aa22.39■■□□□ 1.17
TCF3-211ENST00000587425 DLC1Q96QB1 1528 aa22.38■■□□□ 1.17
TCF3-211ENST00000587425 PMFBP1Q8TBY8 1022 aa22.38■■□□□ 1.17
TCF3-211ENST00000587425 CABLES1Q8TDN4 633 aa22.38■■□□□ 1.17
TCF3-211ENST00000587425 MINK1Q8N4C8 1332 aaPredicted RBP22.37■■□□□ 1.17
TCF3-211ENST00000587425 LMOD2Q6P5Q4 547 aa22.36■■□□□ 1.17
TCF3-211ENST00000587425 TNS3Q68CZ2 1445 aa22.35■■□□□ 1.17
TCF3-211ENST00000587425 HAP1P54257 671 aaPredicted RBP22.34■■□□□ 1.17
TCF3-211ENST00000587425 ADGRB2O60241 1585 aa22.33■■□□□ 1.17
TCF3-211ENST00000587425 EP400Q96L91 3159 aa22.33■■□□□ 1.17
TCF3-211ENST00000587425 PSME1Q06323 249 aa22.33■■□□□ 1.17
TCF3-211ENST00000587425 ATAD2Q6PL18 1390 aa22.31■■□□□ 1.16
TCF3-211ENST00000587425 PRR36Q9H6K5 1346 aa22.31■■□□□ 1.16
TCF3-211ENST00000587425 GJD4Q96KN9 370 aaPredicted RBP22.3■■□□□ 1.16
TCF3-211ENST00000587425 ABCA3Q99758 1704 aa22.3■■□□□ 1.16
TCF3-211ENST00000587425 SLIT2O94813 1529 aa22.3■■□□□ 1.16
TCF3-211ENST00000587425 ANKARQ7Z5J8 1434 aa22.3■■□□□ 1.16
TCF3-211ENST00000587425 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.29■■□□□ 1.16
TCF3-211ENST00000587425 HRCP23327 699 aa22.29■■□□□ 1.16
TCF3-211ENST00000587425 UNC5CLQ8IV45 518 aa22.29■■□□□ 1.16
TCF3-211ENST00000587425 SBNO1A3KN83 1393 aa22.28■■□□□ 1.16
TCF3-211ENST00000587425 GLI3P10071 1580 aa22.28■■□□□ 1.16
TCF3-211ENST00000587425 RALGAPBQ86X10 1494 aa22.28■■□□□ 1.16
TCF3-211ENST00000587425 ARHGEF28Q8N1W1 1705 aaKnown RBP22.27■■□□□ 1.16
TCF3-211ENST00000587425 PLCH1Q4KWH8 1693 aa22.26■■□□□ 1.15
TCF3-211ENST00000587425 TRPM3Q9HCF6 1732 aaPredicted RBP22.26■■□□□ 1.15
TCF3-211ENST00000587425 TULP4Q9NRJ4 1543 aa22.26■■□□□ 1.15
TCF3-211ENST00000587425 WASLO00401 505 aaPredicted RBP22.25■■□□□ 1.15
TCF3-211ENST00000587425 ARHGEF10O15013 1369 aa22.25■■□□□ 1.15
TCF3-211ENST00000587425 CCDC9Q9Y3X0 531 aaKnown RBP22.22■■□□□ 1.15
TCF3-211ENST00000587425 ALS2Q96Q42 1657 aa22.21■■□□□ 1.15
TCF3-211ENST00000587425 FAM83GA6ND36 823 aa22.21■■□□□ 1.15
TCF3-211ENST00000587425 BRWD3Q6RI45 1802 aa22.21■■□□□ 1.15
TCF3-211ENST00000587425 EIF3AQ14152 1382 aaKnown RBP22.21■■□□□ 1.15
TCF3-211ENST00000587425 GPRASP1Q5JY77 1395 aa22.21■■□□□ 1.15
TCF3-211ENST00000587425 NGDNQ8NEJ9 315 aaKnown RBP22.2■■□□□ 1.14
TCF3-211ENST00000587425 STAC3Q96MF2 364 aa22.2■■□□□ 1.14
TCF3-211ENST00000587425 PAK3O75914 559 aaPredicted RBP22.19■■□□□ 1.14
TCF3-211ENST00000587425 NWD2Q9ULI1 1742 aa22.19■■□□□ 1.14
TCF3-211ENST00000587425 ATP7BP35670 1465 aa22.18■■□□□ 1.14
TCF3-211ENST00000587425 VPS72Q15906 364 aa22.17■■□□□ 1.14
TCF3-211ENST00000587425 NBPF1Q3BBV0 1214 aa22.17■■□□□ 1.14
TCF3-211ENST00000587425 NUDT16Q96DE0 195 aaKnown RBP22.17■■□□□ 1.14
TCF3-211ENST00000587425 SEPT12Q8IYM1 358 aa22.16■■□□□ 1.14
TCF3-211ENST00000587425 ITSN1Q15811 1721 aa22.15■■□□□ 1.14
TCF3-211ENST00000587425 SRCAPQ6ZRS2 3230 aa22.15■■□□□ 1.14
TCF3-211ENST00000587425 CDK19Q9BWU1 502 aa22.15■■□□□ 1.14
TCF3-211ENST00000587425 NRAPQ86VF7 1730 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms