RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 NUTM2BA6NNL0 878 aaPredicted RBP20.84■□□□□ 0.93
HDAC5-203ENST00000586339 NUTM2EB1AL46 878 aaPredicted RBP20.84■□□□□ 0.93
HDAC5-203ENST00000586339 NUTM2AQ8IVF1 878 aaPredicted RBP20.84■□□□□ 0.93
HDAC5-203ENST00000586339 DDX17Q92841 729 aaKnown RBP20.84■□□□□ 0.93
HDAC5-203ENST00000586339 COL22A1Q8NFW1 1626 aaPredicted RBP20.84■□□□□ 0.93
HDAC5-203ENST00000586339 ORAI2Q96SN7 254 aa20.83■□□□□ 0.93
HDAC5-203ENST00000586339 CDK12Q9NYV4 1490 aaPredicted RBP20.82■□□□□ 0.92
HDAC5-203ENST00000586339 FMN2Q9NZ56 1722 aa20.82■□□□□ 0.92
HDAC5-203ENST00000586339 YTHDC2Q9H6S0 1430 aaKnown RBP20.82■□□□□ 0.92
HDAC5-203ENST00000586339 KIF1AQ12756 1690 aa20.8■□□□□ 0.92
HDAC5-203ENST00000586339 AFF2P51816 1311 aa20.79■□□□□ 0.92
HDAC5-203ENST00000586339 NPHP3Q7Z494 1330 aa20.79■□□□□ 0.92
HDAC5-203ENST00000586339 PXDNQ92626 1479 aa20.78■□□□□ 0.92
HDAC5-203ENST00000586339 STK26Q9P289 416 aa20.78■□□□□ 0.92
HDAC5-203ENST00000586339 RXRBP28702 533 aa20.77■□□□□ 0.92
HDAC5-203ENST00000586339 TMEM132EQ6IEE7 984 aa20.77■□□□□ 0.92
HDAC5-203ENST00000586339 SIRT1Q96EB6 747 aa20.77■□□□□ 0.92
HDAC5-203ENST00000586339 C14orf93Q9H972 538 aaKnown RBP20.77■□□□□ 0.92
HDAC5-203ENST00000586339 MARF1Q9Y4F3 1742 aaKnown RBP20.77■□□□□ 0.92
HDAC5-203ENST00000586339 PLEKHH1Q9ULM0 1364 aa20.76■□□□□ 0.91
HDAC5-203ENST00000586339 WAPLQ7Z5K2 1190 aa20.76■□□□□ 0.91
HDAC5-203ENST00000586339 DHX57Q6P158 1386 aaKnown RBP20.75■□□□□ 0.91
HDAC5-203ENST00000586339 ESCO1Q5FWF5 840 aa20.75■□□□□ 0.91
HDAC5-203ENST00000586339 C8orf37Q96NL8 207 aa20.75■□□□□ 0.91
HDAC5-203ENST00000586339 DLC1Q96QB1 1528 aa20.74■□□□□ 0.91
HDAC5-203ENST00000586339 RGPD8O14715 1765 aaPredicted RBP20.73■□□□□ 0.91
HDAC5-203ENST00000586339 HRCP23327 699 aa20.73■□□□□ 0.91
HDAC5-203ENST00000586339 CFAP70Q5T0N1 1121 aa20.7■□□□□ 0.9
HDAC5-203ENST00000586339 ADGRB1O14514 1584 aa20.7■□□□□ 0.9
HDAC5-203ENST00000586339 ADGRB2O60241 1585 aa20.7■□□□□ 0.9
HDAC5-203ENST00000586339 FOXO3O43524 673 aa20.69■□□□□ 0.9
HDAC5-203ENST00000586339 ADAMTS2O95450 1211 aa20.69■□□□□ 0.9
HDAC5-203ENST00000586339 NGLY1Q96IV0 654 aa20.69■□□□□ 0.9
HDAC5-203ENST00000586339 RBM6P78332 1123 aaKnown RBP20.68■□□□□ 0.9
HDAC5-203ENST00000586339 STAC3Q96MF2 364 aa20.68■□□□□ 0.9
HDAC5-203ENST00000586339 QTRT2Q9H974 415 aaKnown RBP20.67■□□□□ 0.9
HDAC5-203ENST00000586339 RGS12O14924 1447 aa20.67■□□□□ 0.9
HDAC5-203ENST00000586339 NUTM2FA1L443 756 aa20.66■□□□□ 0.9
HDAC5-203ENST00000586339 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.66■□□□□ 0.9
HDAC5-203ENST00000586339 FNBP4Q8N3X1 1017 aaPredicted RBP20.65■□□□□ 0.9
HDAC5-203ENST00000586339 UPF1Q92900 1129 aaKnown RBP eCLIP20.64■□□□□ 0.89
HDAC5-203ENST00000586339 PRAM1Q96QH2 718 aa20.64■□□□□ 0.89
HDAC5-203ENST00000586339 ANKARQ7Z5J8 1434 aa20.63■□□□□ 0.89
HDAC5-203ENST00000586339 XPCQ01831 940 aaPredicted RBP20.63■□□□□ 0.89
HDAC5-203ENST00000586339 USP21Q9UK80 565 aa20.63■□□□□ 0.89
HDAC5-203ENST00000586339 TRPC5Q9UL62 973 aaPredicted RBP20.63■□□□□ 0.89
HDAC5-203ENST00000586339 USP32Q8NFA0 1604 aa20.63■□□□□ 0.89
HDAC5-203ENST00000586339 ATRNO75882 1429 aa20.62■□□□□ 0.89
HDAC5-203ENST00000586339 SPATA31A3Q5VYP0 1347 aa20.62■□□□□ 0.89
HDAC5-203ENST00000586339 TNS3Q68CZ2 1445 aa20.61■□□□□ 0.89
HDAC5-203ENST00000586339 DCAF11Q8TEB1 546 aa20.6■□□□□ 0.89
HDAC5-203ENST00000586339 POGKQ9P215 609 aa20.6■□□□□ 0.89
HDAC5-203ENST00000586339 PHF8Q9UPP1 1060 aa20.6■□□□□ 0.89
HDAC5-203ENST00000586339 ARHGEF28Q8N1W1 1705 aaKnown RBP20.6■□□□□ 0.89
HDAC5-203ENST00000586339 EIF3AQ14152 1382 aaKnown RBP20.59■□□□□ 0.89
HDAC5-203ENST00000586339 ABCA3Q99758 1704 aa20.59■□□□□ 0.89
HDAC5-203ENST00000586339 BCL9LQ86UU0 1499 aa20.58■□□□□ 0.89
HDAC5-203ENST00000586339 KRT28Q7Z3Y7 464 aa20.58■□□□□ 0.89
HDAC5-203ENST00000586339 KIAA1210Q9ULL0 1709 aa20.58■□□□□ 0.88
HDAC5-203ENST00000586339 SBNO1A3KN83 1393 aa20.58■□□□□ 0.88
HDAC5-203ENST00000586339 PSME1Q06323 249 aa20.57■□□□□ 0.88
HDAC5-203ENST00000586339 SAFB2Q14151 953 aaKnown RBP eCLIP20.57■□□□□ 0.88
HDAC5-203ENST00000586339 TULP4Q9NRJ4 1543 aa20.57■□□□□ 0.88
HDAC5-203ENST00000586339 ITSN1Q15811 1721 aa20.56■□□□□ 0.88
HDAC5-203ENST00000586339 KDM2AQ9Y2K7 1162 aa20.56■□□□□ 0.88
HDAC5-203ENST00000586339 TRPM3Q9HCF6 1732 aaPredicted RBP20.56■□□□□ 0.88
HDAC5-203ENST00000586339 NWD2Q9ULI1 1742 aa20.56■□□□□ 0.88
HDAC5-203ENST00000586339 SLIT2O94813 1529 aa20.55■□□□□ 0.88
HDAC5-203ENST00000586339 TRAK1Q9UPV9 953 aa20.55■□□□□ 0.88
HDAC5-203ENST00000586339 ARHGEF10O15013 1369 aa20.55■□□□□ 0.88
HDAC5-203ENST00000586339 EP400Q96L91 3159 aa20.54■□□□□ 0.88
HDAC5-203ENST00000586339 ATAD2Q6PL18 1390 aa20.53■□□□□ 0.88
HDAC5-203ENST00000586339 PLCH1Q4KWH8 1693 aa20.53■□□□□ 0.88
HDAC5-203ENST00000586339 ALS2Q96Q42 1657 aa20.52■□□□□ 0.88
HDAC5-203ENST00000586339 MINK1Q8N4C8 1332 aaPredicted RBP20.5■□□□□ 0.87
HDAC5-203ENST00000586339 GLI3P10071 1580 aa20.48■□□□□ 0.87
HDAC5-203ENST00000586339 WASLO00401 505 aaPredicted RBP20.48■□□□□ 0.87
HDAC5-203ENST00000586339 UNC5CLQ8IV45 518 aa20.48■□□□□ 0.87
HDAC5-203ENST00000586339 GJD4Q96KN9 370 aaPredicted RBP20.48■□□□□ 0.87
HDAC5-203ENST00000586339 HIRIP3Q9BW71 556 aaPredicted RBP20.48■□□□□ 0.87
HDAC5-203ENST00000586339 GPRASP1Q5JY77 1395 aa20.47■□□□□ 0.87
HDAC5-203ENST00000586339 HAP1P54257 671 aaPredicted RBP20.47■□□□□ 0.87
HDAC5-203ENST00000586339 PMFBP1Q8TBY8 1022 aa20.47■□□□□ 0.87
HDAC5-203ENST00000586339 PRR36Q9H6K5 1346 aa20.47■□□□□ 0.87
HDAC5-203ENST00000586339 ATP7BP35670 1465 aa20.46■□□□□ 0.87
HDAC5-203ENST00000586339 RALGAPBQ86X10 1494 aa20.46■□□□□ 0.87
HDAC5-203ENST00000586339 CRYBG1Q9Y4K1 1723 aa20.46■□□□□ 0.87
HDAC5-203ENST00000586339 TOPAZ1Q8N9V7 1692 aa20.45■□□□□ 0.86
HDAC5-203ENST00000586339 BRWD3Q6RI45 1802 aa20.44■□□□□ 0.86
HDAC5-203ENST00000586339 LMOD2Q6P5Q4 547 aa20.43■□□□□ 0.86
HDAC5-203ENST00000586339 NRAPQ86VF7 1730 aa20.43■□□□□ 0.86
HDAC5-203ENST00000586339 COL14A1Q05707 1796 aaKnown RBP20.43■□□□□ 0.86
HDAC5-203ENST00000586339 CABLES1Q8TDN4 633 aa20.42■□□□□ 0.86
HDAC5-203ENST00000586339 VPS72Q15906 364 aa20.4■□□□□ 0.86
HDAC5-203ENST00000586339 NGDNQ8NEJ9 315 aaKnown RBP20.39■□□□□ 0.85
HDAC5-203ENST00000586339 CCDC125Q86Z20 511 aa20.38■□□□□ 0.85
HDAC5-203ENST00000586339 NUDT16Q96DE0 195 aaKnown RBP20.37■□□□□ 0.85
HDAC5-203ENST00000586339 PHRF1Q9P1Y6 1649 aaKnown RBP20.37■□□□□ 0.85
HDAC5-203ENST00000586339 QRICH2Q9H0J4 1663 aa20.36■□□□□ 0.85
HDAC5-203ENST00000586339 POLR3AO14802 1390 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms