RNA–Protein interactions for RNA: ENST00000585856.2

PTBP1-206, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 2

Gene PTBP1, Length 1,217 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-206ENST00000585856 TECPR2O15040 1411 aa39.64■■■■□ 3.94
PTBP1-206ENST00000585856 KNDC1Q76NI1 1749 aa39.63■■■■□ 3.94
PTBP1-206ENST00000585856 UPF1Q92900 1129 aaKnown RBP eCLIP39.63■■■■□ 3.935e-28■■■■■ 62.8
PTBP1-206ENST00000585856 RGL3Q3MIN7 710 aa39.62■■■■□ 3.93
PTBP1-206ENST00000585856 COL22A1Q8NFW1 1626 aaPredicted RBP39.61■■■■□ 3.93
PTBP1-206ENST00000585856 QTRT2Q9H974 415 aaKnown RBP39.58■■■■□ 3.93
PTBP1-206ENST00000585856 NPHP3Q7Z494 1330 aa39.57■■■■□ 3.92
PTBP1-206ENST00000585856 LRPPRCP42704 1394 aaKnown RBP39.57■■■■□ 3.92
PTBP1-206ENST00000585856 PIK3C2GO75747 1445 aa39.57■■■■□ 3.92
PTBP1-206ENST00000585856 RBM6P78332 1123 aaKnown RBP39.56■■■■□ 3.92
PTBP1-206ENST00000585856 NGLY1Q96IV0 654 aa39.56■■■■□ 3.92
PTBP1-206ENST00000585856 ADAMTS2O95450 1211 aa39.55■■■■□ 3.92
PTBP1-206ENST00000585856 ABCC11Q96J66 1382 aa39.54■■■■□ 3.92
PTBP1-206ENST00000585856 ESCO1Q5FWF5 840 aa39.53■■■■□ 3.92
PTBP1-206ENST00000585856 STK26Q9P289 416 aa39.51■■■■□ 3.92
PTBP1-206ENST00000585856 RGS12O14924 1447 aa39.5■■■■□ 3.91
PTBP1-206ENST00000585856 PXDNQ92626 1479 aa39.49■■■■□ 3.91
PTBP1-206ENST00000585856 WAPLQ7Z5K2 1190 aa39.47■■■■□ 3.91
PTBP1-206ENST00000585856 MARF1Q9Y4F3 1742 aaKnown RBP39.47■■■■□ 3.91
PTBP1-206ENST00000585856 FMN2Q9NZ56 1722 aa39.46■■■■□ 3.91
PTBP1-206ENST00000585856 TMEM132EQ6IEE7 984 aa39.45■■■■□ 3.91
PTBP1-206ENST00000585856 YTHDC2Q9H6S0 1430 aaKnown RBP39.45■■■■□ 3.91
PTBP1-206ENST00000585856 MYOM2P54296 1465 aa39.44■■■■□ 3.9
PTBP1-206ENST00000585856 USP21Q9UK80 565 aa39.43■■■■□ 3.9
PTBP1-206ENST00000585856 KIF1AQ12756 1690 aa39.43■■■■□ 3.9
PTBP1-206ENST00000585856 FNBP4Q8N3X1 1017 aaPredicted RBP39.42■■■■□ 3.9
PTBP1-206ENST00000585856 FOXO3O43524 673 aa39.41■■■■□ 3.9
PTBP1-206ENST00000585856 TRPC5Q9UL62 973 aaPredicted RBP39.4■■■■□ 3.9
PTBP1-206ENST00000585856 PLEKHH1Q9ULM0 1364 aa39.4■■■■□ 3.9
PTBP1-206ENST00000585856 NRXN1Q9ULB1 1477 aa39.39■■■■□ 3.9
PTBP1-206ENST00000585856 SIRT1Q96EB6 747 aa39.39■■■■□ 3.9
PTBP1-206ENST00000585856 C14orf93Q9H972 538 aaKnown RBP39.36■■■■□ 3.89
PTBP1-206ENST00000585856 NUTM2FA1L443 756 aa39.35■■■■□ 3.89
PTBP1-206ENST00000585856 XPCQ01831 940 aaPredicted RBP39.33■■■■□ 3.89
PTBP1-206ENST00000585856 ATRNO75882 1429 aa39.32■■■■□ 3.89
PTBP1-206ENST00000585856 DHX57Q6P158 1386 aaKnown RBP39.32■■■■□ 3.88
PTBP1-206ENST00000585856 RGPD8O14715 1765 aaPredicted RBP39.31■■■■□ 3.88
PTBP1-206ENST00000585856 ATAD2Q6PL18 1390 aa39.27■■■■□ 3.88
PTBP1-206ENST00000585856 TNKS1BP1Q9C0C2 1729 aaKnown RBP39.27■■■■□ 3.88
PTBP1-206ENST00000585856 RAB3GAP2Q9H2M9 1393 aa39.26■■■■□ 3.88
PTBP1-206ENST00000585856 BCL9LQ86UU0 1499 aa39.25■■■■□ 3.87
PTBP1-206ENST00000585856 CFAP70Q5T0N1 1121 aa39.25■■■■□ 3.87
PTBP1-206ENST00000585856 SPATA31A3Q5VYP0 1347 aa39.24■■■■□ 3.87
PTBP1-206ENST00000585856 DLC1Q96QB1 1528 aa39.22■■■■□ 3.87
PTBP1-206ENST00000585856 KRT28Q7Z3Y7 464 aa39.19■■■■□ 3.86
PTBP1-206ENST00000585856 USP32Q8NFA0 1604 aa39.18■■■■□ 3.86
PTBP1-206ENST00000585856 PHF8Q9UPP1 1060 aa39.17■■■■□ 3.86
PTBP1-206ENST00000585856 PRAM1Q96QH2 718 aa39.16■■■■□ 3.86
PTBP1-206ENST00000585856 PSME1Q06323 249 aa39.15■■■■□ 3.86
PTBP1-206ENST00000585856 TNS3Q68CZ2 1445 aa39.14■■■■□ 3.86
PTBP1-206ENST00000585856 ADGRB2O60241 1585 aa39.14■■■■□ 3.86
PTBP1-206ENST00000585856 GJD4Q96KN9 370 aaPredicted RBP39.13■■■■□ 3.85
PTBP1-206ENST00000585856 SLIT2O94813 1529 aa39.13■■■■□ 3.85
PTBP1-206ENST00000585856 ADGRB1O14514 1584 aa39.12■■■■□ 3.85
PTBP1-206ENST00000585856 ANKARQ7Z5J8 1434 aa39.1■■■■□ 3.85
PTBP1-206ENST00000585856 POGKQ9P215 609 aa39.1■■■■□ 3.85
PTBP1-206ENST00000585856 SBNO1A3KN83 1393 aa39.09■■■■□ 3.85
PTBP1-206ENST00000585856 SAFB2Q14151 953 aaKnown RBP eCLIP39.09■■■■□ 3.85
PTBP1-206ENST00000585856 UNC5CLQ8IV45 518 aa39.08■■■■□ 3.85
PTBP1-206ENST00000585856 ABCA3Q99758 1704 aa39.07■■■■□ 3.85
PTBP1-206ENST00000585856 HAP1P54257 671 aaPredicted RBP39.05■■■■□ 3.84
PTBP1-206ENST00000585856 NWD2Q9ULI1 1742 aa39.05■■■■□ 3.84
PTBP1-206ENST00000585856 ARHGEF10O15013 1369 aa39.05■■■■□ 3.84
PTBP1-206ENST00000585856 STAC3Q96MF2 364 aa39.04■■■■□ 3.84
PTBP1-206ENST00000585856 GLI3P10071 1580 aa39.04■■■■□ 3.84
PTBP1-206ENST00000585856 RALGAPBQ86X10 1494 aa39.02■■■■□ 3.84
PTBP1-206ENST00000585856 PLCH1Q4KWH8 1693 aa39.02■■■■□ 3.84
PTBP1-206ENST00000585856 EIF3AQ14152 1382 aaKnown RBP39.01■■■■□ 3.84
PTBP1-206ENST00000585856 CCDC125Q86Z20 511 aa39.01■■■■□ 3.84
PTBP1-206ENST00000585856 EP400Q96L91 3159 aa38.99■■■■□ 3.83
PTBP1-206ENST00000585856 HRCP23327 699 aa38.99■■■■□ 3.83
PTBP1-206ENST00000585856 DCAF11Q8TEB1 546 aa38.98■■■■□ 3.83
PTBP1-206ENST00000585856 TRAK1Q9UPV9 953 aa38.98■■■■□ 3.83
PTBP1-206ENST00000585856 TRPM3Q9HCF6 1732 aaPredicted RBP38.97■■■■□ 3.83
PTBP1-206ENST00000585856 KDM2AQ9Y2K7 1162 aa38.96■■■■□ 3.83
PTBP1-206ENST00000585856 LMOD2Q6P5Q4 547 aa38.95■■■■□ 3.83
PTBP1-206ENST00000585856 TULP4Q9NRJ4 1543 aa38.94■■■■□ 3.82
PTBP1-206ENST00000585856 BRWD3Q6RI45 1802 aa38.94■■■■□ 3.82
PTBP1-206ENST00000585856 PMFBP1Q8TBY8 1022 aa38.94■■■■□ 3.82
PTBP1-206ENST00000585856 CABLES1Q8TDN4 633 aa38.94■■■■□ 3.82
PTBP1-206ENST00000585856 ALS2Q96Q42 1657 aa38.91■■■■□ 3.82
PTBP1-206ENST00000585856 HIRIP3Q9BW71 556 aaPredicted RBP38.91■■■■□ 3.82
PTBP1-206ENST00000585856 VPS72Q15906 364 aa38.9■■■■□ 3.82
PTBP1-206ENST00000585856 ARHGEF28Q8N1W1 1705 aaKnown RBP38.89■■■■□ 3.82
PTBP1-206ENST00000585856 GPRASP1Q5JY77 1395 aa38.89■■■■□ 3.82
PTBP1-206ENST00000585856 MINK1Q8N4C8 1332 aaPredicted RBP38.89■■■■□ 3.82
PTBP1-206ENST00000585856 ITSN1Q15811 1721 aa38.88■■■■□ 3.81
PTBP1-206ENST00000585856 WASLO00401 505 aaPredicted RBP38.86■■■■□ 3.81
PTBP1-206ENST00000585856 PLEKHG5O94827 1062 aa38.85■■■■□ 3.81
PTBP1-206ENST00000585856 PRR36Q9H6K5 1346 aa38.84■■■■□ 3.81
PTBP1-206ENST00000585856 ZRANB1Q9UGI0 708 aa38.83■■■■□ 3.81
PTBP1-206ENST00000585856 BLMP54132 1417 aaPredicted RBP38.82■■■■□ 3.81
PTBP1-206ENST00000585856 NRAPQ86VF7 1730 aa38.82■■■■□ 3.8
PTBP1-206ENST00000585856 COL14A1Q05707 1796 aaKnown RBP38.81■■■■□ 3.8
PTBP1-206ENST00000585856 SEPT12Q8IYM1 358 aa38.8■■■■□ 3.8
PTBP1-206ENST00000585856 CCDC9Q9Y3X0 531 aaKnown RBP38.8■■■■□ 3.8
PTBP1-206ENST00000585856 FAM83GA6ND36 823 aa38.79■■■■□ 3.8
PTBP1-206ENST00000585856 ONECUT3O60422 494 aaPredicted RBP38.79■■■■□ 3.8
PTBP1-206ENST00000585856 CRYBG1Q9Y4K1 1723 aa38.78■■■■□ 3.8
PTBP1-206ENST00000585856 KIAA1210Q9ULL0 1709 aa38.77■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms