RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 ABCC11Q96J66 1382 aa26.47■■□□□ 1.83
SRSF1-208ENST00000584773 CDC42BPGQ6DT37 1551 aa26.46■■□□□ 1.83
SRSF1-208ENST00000584773 LAMC1P11047 1609 aa26.46■■□□□ 1.83
SRSF1-208ENST00000584773 KDM2AQ9Y2K7 1162 aa26.44■■□□□ 1.82
SRSF1-208ENST00000584773 POTEAQ6S8J7 498 aa26.42■■□□□ 1.82
SRSF1-208ENST00000584773 NUTM2FA1L443 756 aa26.41■■□□□ 1.82
SRSF1-208ENST00000584773 DCAF11Q8TEB1 546 aa26.41■■□□□ 1.82
SRSF1-208ENST00000584773 SPATA31A6Q5VVP1 1343 aa26.41■■□□□ 1.82
SRSF1-208ENST00000584773 DHX57Q6P158 1386 aaKnown RBP26.4■■□□□ 1.82
SRSF1-208ENST00000584773 NUTM2BA6NNL0 878 aaPredicted RBP26.39■■□□□ 1.81
SRSF1-208ENST00000584773 NUTM2EB1AL46 878 aaPredicted RBP26.39■■□□□ 1.81
SRSF1-208ENST00000584773 NUTM2AQ8IVF1 878 aaPredicted RBP26.39■■□□□ 1.81
SRSF1-208ENST00000584773 ADGRB1O14514 1584 aa26.38■■□□□ 1.81
SRSF1-208ENST00000584773 FMN2Q9NZ56 1722 aa26.36■■□□□ 1.81
SRSF1-208ENST00000584773 SAFB2Q14151 953 aaKnown RBP eCLIP26.36■■□□□ 1.81
SRSF1-208ENST00000584773 MEX3CQ5U5Q3 659 aaKnown RBP26.36■■□□□ 1.81
SRSF1-208ENST00000584773 PNPLA6Q8IY17 1366 aa26.35■■□□□ 1.81
SRSF1-208ENST00000584773 ESCO1Q5FWF5 840 aa26.35■■□□□ 1.81
SRSF1-208ENST00000584773 LRRC59Q96AG4 307 aaKnown RBP26.35■■□□□ 1.81
SRSF1-208ENST00000584773 PRAM1Q96QH2 718 aa26.33■■□□□ 1.81
SRSF1-208ENST00000584773 SOS2Q07890 1332 aaPredicted RBP26.32■■□□□ 1.8
SRSF1-208ENST00000584773 SIRT1Q96EB6 747 aa26.31■■□□□ 1.8
SRSF1-208ENST00000584773 RGPD8O14715 1765 aaPredicted RBP26.31■■□□□ 1.8
SRSF1-208ENST00000584773 DLC1Q96QB1 1528 aa26.3■■□□□ 1.8
SRSF1-208ENST00000584773 XPCQ01831 940 aaPredicted RBP26.3■■□□□ 1.8
SRSF1-208ENST00000584773 TRAK1Q9UPV9 953 aa26.3■■□□□ 1.8
SRSF1-208ENST00000584773 FOXO3O43524 673 aa26.27■■□□□ 1.8
SRSF1-208ENST00000584773 PXDNQ92626 1479 aa26.27■■□□□ 1.8
SRSF1-208ENST00000584773 POGKQ9P215 609 aa26.26■■□□□ 1.79
SRSF1-208ENST00000584773 NPHP3Q7Z494 1330 aa26.24■■□□□ 1.79
SRSF1-208ENST00000584773 HIRIP3Q9BW71 556 aaPredicted RBP26.22■■□□□ 1.79
SRSF1-208ENST00000584773 KIF1AQ12756 1690 aa26.22■■□□□ 1.79
SRSF1-208ENST00000584773 USP32Q8NFA0 1604 aa26.21■■□□□ 1.79
SRSF1-208ENST00000584773 ADAMTS2O95450 1211 aa26.21■■□□□ 1.79
SRSF1-208ENST00000584773 ARHGEF28Q8N1W1 1705 aaKnown RBP26.21■■□□□ 1.79
SRSF1-208ENST00000584773 ADGRB2O60241 1585 aa26.2■■□□□ 1.79
SRSF1-208ENST00000584773 AFF2P51816 1311 aa26.2■■□□□ 1.79
SRSF1-208ENST00000584773 MINK1Q8N4C8 1332 aaPredicted RBP26.2■■□□□ 1.79
SRSF1-208ENST00000584773 STAC3Q96MF2 364 aa26.2■■□□□ 1.79
SRSF1-208ENST00000584773 C8orf37Q96NL8 207 aa26.2■■□□□ 1.79
SRSF1-208ENST00000584773 COL22A1Q8NFW1 1626 aaPredicted RBP26.2■■□□□ 1.78
SRSF1-208ENST00000584773 ZNF772Q68DY9 489 aaPredicted RBP26.18■■□□□ 1.78
SRSF1-208ENST00000584773 SIN3AQ96ST3 1273 aa26.18■■□□□ 1.78
SRSF1-208ENST00000584773 PHF8Q9UPP1 1060 aa26.15■■□□□ 1.78
SRSF1-208ENST00000584773 KIAA1210Q9ULL0 1709 aa26.15■■□□□ 1.78
SRSF1-208ENST00000584773 NBPF1Q3BBV0 1214 aa26.14■■□□□ 1.77
SRSF1-208ENST00000584773 KRT28Q7Z3Y7 464 aa26.13■■□□□ 1.77
SRSF1-208ENST00000584773 PRR36Q9H6K5 1346 aa26.12■■□□□ 1.77
SRSF1-208ENST00000584773 PMFBP1Q8TBY8 1022 aa26.12■■□□□ 1.77
SRSF1-208ENST00000584773 ANKARQ7Z5J8 1434 aa26.11■■□□□ 1.77
SRSF1-208ENST00000584773 NEUROD1Q13562 356 aa26.1■■□□□ 1.77
SRSF1-208ENST00000584773 L3MBTL2Q969R5 705 aa26.1■■□□□ 1.77
SRSF1-208ENST00000584773 NGLY1Q96IV0 654 aa26.1■■□□□ 1.77
SRSF1-208ENST00000584773 SPATA31A3Q5VYP0 1347 aa26.09■■□□□ 1.77
SRSF1-208ENST00000584773 TULP4Q9NRJ4 1543 aa26.09■■□□□ 1.77
SRSF1-208ENST00000584773 WASLO00401 505 aaPredicted RBP26.08■■□□□ 1.77
SRSF1-208ENST00000584773 RXRBP28702 533 aa26.07■■□□□ 1.76
SRSF1-208ENST00000584773 MARF1Q9Y4F3 1742 aaKnown RBP26.07■■□□□ 1.76
SRSF1-208ENST00000584773 PLEKHG5O94827 1062 aa26.06■■□□□ 1.76
SRSF1-208ENST00000584773 TNS3Q68CZ2 1445 aa26.05■■□□□ 1.76
SRSF1-208ENST00000584773 QTRT2Q9H974 415 aaKnown RBP26.04■■□□□ 1.76
SRSF1-208ENST00000584773 PSME1Q06323 249 aa26.03■■□□□ 1.76
SRSF1-208ENST00000584773 USP21Q9UK80 565 aa26.02■■□□□ 1.76
SRSF1-208ENST00000584773 TRPM3Q9HCF6 1732 aaPredicted RBP26.02■■□□□ 1.76
SRSF1-208ENST00000584773 ATP7BP35670 1465 aa26.01■■□□□ 1.75
SRSF1-208ENST00000584773 EIF3AQ14152 1382 aaKnown RBP26.01■■□□□ 1.75
SRSF1-208ENST00000584773 CABLES1Q8TDN4 633 aa26.01■■□□□ 1.75
SRSF1-208ENST00000584773 LMOD2Q6P5Q4 547 aa26■■□□□ 1.75
SRSF1-208ENST00000584773 ABCA3Q99758 1704 aa26■■□□□ 1.75
SRSF1-208ENST00000584773 TRPM1Q7Z4N2 1603 aa25.99■■□□□ 1.75
SRSF1-208ENST00000584773 RGS12O14924 1447 aa25.99■■□□□ 1.75
SRSF1-208ENST00000584773 SBNO1A3KN83 1393 aa25.99■■□□□ 1.75
SRSF1-208ENST00000584773 FNBP4Q8N3X1 1017 aaPredicted RBP25.99■■□□□ 1.75
SRSF1-208ENST00000584773 CDK19Q9BWU1 502 aa25.98■■□□□ 1.75
SRSF1-208ENST00000584773 ITSN1Q15811 1721 aa25.97■■□□□ 1.75
SRSF1-208ENST00000584773 TRIM26Q12899 539 aaPredicted RBP25.97■■□□□ 1.75
SRSF1-208ENST00000584773 NUDT16Q96DE0 195 aaKnown RBP25.97■■□□□ 1.75
SRSF1-208ENST00000584773 RBM6P78332 1123 aaKnown RBP25.96■■□□□ 1.75
SRSF1-208ENST00000584773 CDK12Q9NYV4 1490 aaPredicted RBP25.96■■□□□ 1.75
SRSF1-208ENST00000584773 BCL9LQ86UU0 1499 aa25.95■■□□□ 1.75
SRSF1-208ENST00000584773 ALS2Q96Q42 1657 aa25.95■■□□□ 1.74
SRSF1-208ENST00000584773 QRICH2Q9H0J4 1663 aa25.95■■□□□ 1.74
SRSF1-208ENST00000584773 TOPAZ1Q8N9V7 1692 aa25.94■■□□□ 1.74
SRSF1-208ENST00000584773 ATRNO75882 1429 aa25.94■■□□□ 1.74
SRSF1-208ENST00000584773 NGDNQ8NEJ9 315 aaKnown RBP25.93■■□□□ 1.74
SRSF1-208ENST00000584773 GPRASP1Q5JY77 1395 aa25.93■■□□□ 1.74
SRSF1-208ENST00000584773 CENPJQ9HC77 1338 aaPredicted RBP25.93■■□□□ 1.74
SRSF1-208ENST00000584773 HAP1P54257 671 aaPredicted RBP25.92■■□□□ 1.74
SRSF1-208ENST00000584773 TRPC5Q9UL62 973 aaPredicted RBP25.92■■□□□ 1.74
SRSF1-208ENST00000584773 ARHGEF10O15013 1369 aa25.92■■□□□ 1.74
SRSF1-208ENST00000584773 NBPF8Q3BBV2 869 aa25.9■■□□□ 1.74
SRSF1-208ENST00000584773 SLIT2O94813 1529 aa25.9■■□□□ 1.74
SRSF1-208ENST00000584773 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.88■■□□□ 1.73
SRSF1-208ENST00000584773 PLCH1Q4KWH8 1693 aa25.88■■□□□ 1.73
SRSF1-208ENST00000584773 ROCK2O75116 1388 aaKnown RBP25.88■■□□□ 1.73
SRSF1-208ENST00000584773 PAK3O75914 559 aaPredicted RBP25.88■■□□□ 1.73
SRSF1-208ENST00000584773 UPF1Q92900 1129 aaKnown RBP eCLIP25.87■■□□□ 1.731e-28■□□□□ 8.2
SRSF1-208ENST00000584773 CABP2Q9NPB3 220 aa25.87■■□□□ 1.73
SRSF1-208ENST00000584773 CRYBG1Q9Y4K1 1723 aa25.86■■□□□ 1.73
SRSF1-208ENST00000584773 SRPK2P78362 688 aaKnown RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms