RNA–Protein interactions for RNA: ENST00000584483.5

SMARCD2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 821 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-211ENST00000584483 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.95■□□□□ 0.78
SMARCD2-211ENST00000584483 MINK1Q8N4C8 1332 aaPredicted RBP19.94■□□□□ 0.78
SMARCD2-211ENST00000584483 KCNA6P17658 529 aa19.93■□□□□ 0.78
SMARCD2-211ENST00000584483 MYOM1P52179 1685 aa19.92■□□□□ 0.78
SMARCD2-211ENST00000584483 PTCH1Q13635 1447 aa19.9■□□□□ 0.78
SMARCD2-211ENST00000584483 STRCP1A6NGW2 1772 aa19.9■□□□□ 0.78
SMARCD2-211ENST00000584483 NWD1Q149M9 1564 aa19.89■□□□□ 0.77
SMARCD2-211ENST00000584483 SLC24A1O60721 1099 aa19.88■□□□□ 0.77
SMARCD2-211ENST00000584483 EVC2Q86UK5 1308 aa19.87■□□□□ 0.77
SMARCD2-211ENST00000584483 CABP2Q9NPB3 220 aa19.86■□□□□ 0.77
SMARCD2-211ENST00000584483 CDCA8Q53HL2 280 aa19.85■□□□□ 0.77
SMARCD2-211ENST00000584483 CDK19Q9BWU1 502 aa19.85■□□□□ 0.77
SMARCD2-211ENST00000584483 ADGRB2O60241 1585 aa19.84■□□□□ 0.77
SMARCD2-211ENST00000584483 PUS7Q96PZ0 661 aaKnown RBP19.84■□□□□ 0.77
SMARCD2-211ENST00000584483 RBM33Q96EV2 1170 aaKnown RBP19.83■□□□□ 0.77
SMARCD2-211ENST00000584483 WASLO00401 505 aaPredicted RBP19.82■□□□□ 0.76
SMARCD2-211ENST00000584483 MIER1Q8N108 512 aa19.82■□□□□ 0.76
SMARCD2-211ENST00000584483 PER1O15534 1290 aaPredicted RBP19.81■□□□□ 0.76
SMARCD2-211ENST00000584483 PANK3Q9H999 370 aa19.81■□□□□ 0.76
SMARCD2-211ENST00000584483 NALCNQ8IZF0 1738 aa19.8■□□□□ 0.76
SMARCD2-211ENST00000584483 SRPK2P78362 688 aaKnown RBP19.79■□□□□ 0.76
SMARCD2-211ENST00000584483 SLC12A5Q9H2X9 1139 aa19.79■□□□□ 0.76
SMARCD2-211ENST00000584483 PRR36Q9H6K5 1346 aa19.77■□□□□ 0.76
SMARCD2-211ENST00000584483 USP32Q8NFA0 1604 aa19.76■□□□□ 0.75
SMARCD2-211ENST00000584483 NKTRP30414 1462 aaKnown RBP19.76■□□□□ 0.75
SMARCD2-211ENST00000584483 PROSER2Q86WR7 435 aaPredicted RBP19.75■□□□□ 0.75
SMARCD2-211ENST00000584483 CARD14Q9BXL6 1004 aa19.75■□□□□ 0.75
SMARCD2-211ENST00000584483 ZNF335Q9H4Z2 1342 aaPredicted RBP19.75■□□□□ 0.75
SMARCD2-211ENST00000584483 XIRP1Q702N8 1843 aaKnown RBP19.74■□□□□ 0.75
SMARCD2-211ENST00000584483 ATP7BP35670 1465 aa19.74■□□□□ 0.75
SMARCD2-211ENST00000584483 CD163L1Q9NR16 1453 aa19.74■□□□□ 0.75
SMARCD2-211ENST00000584483 ATAD2Q6PL18 1390 aa19.74■□□□□ 0.75
SMARCD2-211ENST00000584483 TMC1Q8TDI8 760 aa19.74■□□□□ 0.75
SMARCD2-211ENST00000584483 NUDT16Q96DE0 195 aaKnown RBP19.74■□□□□ 0.75
SMARCD2-211ENST00000584483 RGPD8O14715 1765 aaPredicted RBP19.74■□□□□ 0.75
SMARCD2-211ENST00000584483 FMN2Q9NZ56 1722 aa19.73■□□□□ 0.75
SMARCD2-211ENST00000584483 ADGRL3Q9HAR2 1447 aa19.73■□□□□ 0.75
SMARCD2-211ENST00000584483 TOPAZ1Q8N9V7 1692 aa19.72■□□□□ 0.75
SMARCD2-211ENST00000584483 NUTM2FA1L443 756 aa19.72■□□□□ 0.75
SMARCD2-211ENST00000584483 CABP1Q9NZU7 370 aa19.72■□□□□ 0.75
SMARCD2-211ENST00000584483 CDC42BPGQ6DT37 1551 aa19.7■□□□□ 0.74
SMARCD2-211ENST00000584483 DMRT2Q9Y5R5 561 aa19.7■□□□□ 0.74
SMARCD2-211ENST00000584483 TMEM94Q12767 1356 aa19.7■□□□□ 0.74
SMARCD2-211ENST00000584483 PPIP5K1Q6PFW1 1433 aa19.68■□□□□ 0.74
SMARCD2-211ENST00000584483 LRRC7Q96NW7 1537 aa19.68■□□□□ 0.74
SMARCD2-211ENST00000584483 A0A1W2PP64 1363 aa19.68■□□□□ 0.74
SMARCD2-211ENST00000584483 ANKRD36BQ8N2N9 1353 aa19.68■□□□□ 0.74
SMARCD2-211ENST00000584483 NINLQ9Y2I6 1382 aa19.68■□□□□ 0.74
SMARCD2-211ENST00000584483 ANP32CO43423 234 aa19.67■□□□□ 0.74
SMARCD2-211ENST00000584483 PRKRIP1Q9H875 184 aaPredicted RBP19.67■□□□□ 0.74
SMARCD2-211ENST00000584483 CCDC61Q9Y6R9 512 aa19.67■□□□□ 0.74
SMARCD2-211ENST00000584483 CNGB1Q14028 1251 aaPredicted RBP19.66■□□□□ 0.74
SMARCD2-211ENST00000584483 AMER1Q5JTC6 1135 aaPredicted RBP19.66■□□□□ 0.74
SMARCD2-211ENST00000584483 CPSF1Q10570 1443 aaKnown RBP19.66■□□□□ 0.74
SMARCD2-211ENST00000584483 NCOA3Q9Y6Q9 1424 aa19.65■□□□□ 0.74
SMARCD2-211ENST00000584483 AKAP12Q02952 1782 aa19.65■□□□□ 0.74
SMARCD2-211ENST00000584483 ANKARQ7Z5J8 1434 aa19.64■□□□□ 0.73
SMARCD2-211ENST00000584483 NSD3Q9BZ95 1437 aa19.64■□□□□ 0.73
SMARCD2-211ENST00000584483 ITSN1Q15811 1721 aa19.63■□□□□ 0.73
SMARCD2-211ENST00000584483 PLEKHG3A1L390 1219 aa19.63■□□□□ 0.73
SMARCD2-211ENST00000584483 C14orf37Q86TY3 774 aa19.63■□□□□ 0.73
SMARCD2-211ENST00000584483 C19orf44Q9H6X5 657 aa19.63■□□□□ 0.73
SMARCD2-211ENST00000584483 KNSTRNQ9Y448 316 aa19.63■□□□□ 0.73
SMARCD2-211ENST00000584483 AEBP2Q6ZN18 517 aaPredicted RBP19.62■□□□□ 0.73
SMARCD2-211ENST00000584483 CC2D1BQ5T0F9 858 aaKnown RBP19.61■□□□□ 0.73
SMARCD2-211ENST00000584483 TERF2IPQ9NYB0 399 aa19.61■□□□□ 0.73
SMARCD2-211ENST00000584483 MON2Q7Z3U7 1717 aa19.61■□□□□ 0.73
SMARCD2-211ENST00000584483 PMFBP1Q8TBY8 1022 aa19.6■□□□□ 0.73
SMARCD2-211ENST00000584483 LTBP4Q8N2S1 1624 aa19.6■□□□□ 0.73
SMARCD2-211ENST00000584483 PARD3Q8TEW0 1356 aa19.59■□□□□ 0.73
SMARCD2-211ENST00000584483 NPC1L1Q9UHC9 1359 aa19.59■□□□□ 0.73
SMARCD2-211ENST00000584483 ACEP12821 1306 aa19.59■□□□□ 0.73
SMARCD2-211ENST00000584483 CCDC184Q52MB2 194 aa19.59■□□□□ 0.73
SMARCD2-211ENST00000584483 HDGFL2Q7Z4V5 671 aaPredicted RBP19.59■□□□□ 0.73
SMARCD2-211ENST00000584483 POLR3AO14802 1390 aaPredicted RBP19.57■□□□□ 0.72
SMARCD2-211ENST00000584483 KTN1Q86UP2 1357 aaKnown RBP19.57■□□□□ 0.72
SMARCD2-211ENST00000584483 DCCP43146 1447 aa19.57■□□□□ 0.72
SMARCD2-211ENST00000584483 ORAI2Q96SN7 254 aa19.56■□□□□ 0.72
SMARCD2-211ENST00000584483 MST1RQ04912 1400 aa19.56■□□□□ 0.72
SMARCD2-211ENST00000584483 NRKQ7Z2Y5 1582 aa19.56■□□□□ 0.72
SMARCD2-211ENST00000584483 C1orf167Q5SNV9 1468 aa19.55■□□□□ 0.72
SMARCD2-211ENST00000584483 SSH2Q76I76 1423 aa19.54■□□□□ 0.72
SMARCD2-211ENST00000584483 CCER2I3L3R5 266 aa19.54■□□□□ 0.72
SMARCD2-211ENST00000584483 FYB1O15117 783 aa19.54■□□□□ 0.72
SMARCD2-211ENST00000584483 RALBP1Q15311 655 aa19.54■□□□□ 0.72
SMARCD2-211ENST00000584483 ZNF692Q9BU19 519 aaPredicted RBP19.54■□□□□ 0.72
SMARCD2-211ENST00000584483 KIF20BQ96Q89 1820 aa19.53■□□□□ 0.72
SMARCD2-211ENST00000584483 EDC4Q6P2E9 1401 aaKnown RBP19.53■□□□□ 0.72
SMARCD2-211ENST00000584483 PHF8Q9UPP1 1060 aa19.53■□□□□ 0.72
SMARCD2-211ENST00000584483 MSH6P52701 1360 aa19.53■□□□□ 0.72
SMARCD2-211ENST00000584483 CGNL1Q0VF96 1302 aa19.52■□□□□ 0.72
SMARCD2-211ENST00000584483 USP6P35125 1406 aa19.52■□□□□ 0.72
SMARCD2-211ENST00000584483 ATF3P18847 181 aa19.52■□□□□ 0.72
SMARCD2-211ENST00000584483 ESCO1Q5FWF5 840 aa19.52■□□□□ 0.72
SMARCD2-211ENST00000584483 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.52■□□□□ 0.72
SMARCD2-211ENST00000584483 ANKRD26Q9UPS8 1709 aa19.51■□□□□ 0.71
SMARCD2-211ENST00000584483 NGDNQ8NEJ9 315 aaKnown RBP19.51■□□□□ 0.71
SMARCD2-211ENST00000584483 ZRANB1Q9UGI0 708 aa19.51■□□□□ 0.71
SMARCD2-211ENST00000584483 CADPS2Q86UW7 1296 aa19.5■□□□□ 0.71
SMARCD2-211ENST00000584483 GGNBP2Q9H3C7 697 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms