RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 RGL3Q3MIN7 710 aa12.94□□□□□ -0.34
CDK5RAP3-229ENST00000583697 AFF2P51816 1311 aa12.93□□□□□ -0.34
CDK5RAP3-229ENST00000583697 ADGRF5Q8IZF2 1346 aa12.93□□□□□ -0.34
CDK5RAP3-229ENST00000583697 MYOM2P54296 1465 aa12.93□□□□□ -0.34
CDK5RAP3-229ENST00000583697 C8orf37Q96NL8 207 aa12.92□□□□□ -0.34
CDK5RAP3-229ENST00000583697 MARF1Q9Y4F3 1742 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-229ENST00000583697 LRPPRCP42704 1394 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-229ENST00000583697 RXRBP28702 533 aa12.91□□□□□ -0.34
CDK5RAP3-229ENST00000583697 ORAI2Q96SN7 254 aa12.91□□□□□ -0.34
CDK5RAP3-229ENST00000583697 SOS2Q07890 1332 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-229ENST00000583697 NPHP3Q7Z494 1330 aa12.9□□□□□ -0.34
CDK5RAP3-229ENST00000583697 YTHDC2Q9H6S0 1430 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-229ENST00000583697 STK26Q9P289 416 aa12.9□□□□□ -0.34
CDK5RAP3-229ENST00000583697 PXDNQ92626 1479 aa12.9□□□□□ -0.34
CDK5RAP3-229ENST00000583697 RAB3GAP2Q9H2M9 1393 aa12.89□□□□□ -0.35
CDK5RAP3-229ENST00000583697 NRXN1Q9ULB1 1477 aa12.89□□□□□ -0.35
CDK5RAP3-229ENST00000583697 RGS12O14924 1447 aa12.88□□□□□ -0.35
CDK5RAP3-229ENST00000583697 ADAMTS2O95450 1211 aa12.88□□□□□ -0.35
CDK5RAP3-229ENST00000583697 ESCO1Q5FWF5 840 aa12.88□□□□□ -0.35
CDK5RAP3-229ENST00000583697 ABCC11Q96J66 1382 aa12.88□□□□□ -0.35
CDK5RAP3-229ENST00000583697 PLEKHH1Q9ULM0 1364 aa12.86□□□□□ -0.35
CDK5RAP3-229ENST00000583697 TMEM132EQ6IEE7 984 aa12.86□□□□□ -0.35
CDK5RAP3-229ENST00000583697 NGLY1Q96IV0 654 aa12.86□□□□□ -0.35
CDK5RAP3-229ENST00000583697 RGPD8O14715 1765 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-229ENST00000583697 ADGRB2O60241 1585 aa12.86□□□□□ -0.35
CDK5RAP3-229ENST00000583697 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-229ENST00000583697 DLC1Q96QB1 1528 aa12.85□□□□□ -0.35
CDK5RAP3-229ENST00000583697 NUTM2FA1L443 756 aa12.85□□□□□ -0.35
CDK5RAP3-229ENST00000583697 WAPLQ7Z5K2 1190 aa12.85□□□□□ -0.35
CDK5RAP3-229ENST00000583697 USP32Q8NFA0 1604 aa12.84□□□□□ -0.35
CDK5RAP3-229ENST00000583697 DHX57Q6P158 1386 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-229ENST00000583697 RBM6P78332 1123 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-229ENST00000583697 ABCA3Q99758 1704 aa12.84□□□□□ -0.35
CDK5RAP3-229ENST00000583697 UPF1Q92900 1129 aaKnown RBP eCLIP12.83□□□□□ -0.36
CDK5RAP3-229ENST00000583697 QTRT2Q9H974 415 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-229ENST00000583697 USP21Q9UK80 565 aa12.83□□□□□ -0.36
CDK5RAP3-229ENST00000583697 FOXO3O43524 673 aa12.82□□□□□ -0.36
CDK5RAP3-229ENST00000583697 XPCQ01831 940 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-229ENST00000583697 ADGRB1O14514 1584 aa12.81□□□□□ -0.36
CDK5RAP3-229ENST00000583697 PLCH1Q4KWH8 1693 aa12.81□□□□□ -0.36
CDK5RAP3-229ENST00000583697 C14orf93Q9H972 538 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-229ENST00000583697 TRPC5Q9UL62 973 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-229ENST00000583697 TNS3Q68CZ2 1445 aa12.8□□□□□ -0.36
CDK5RAP3-229ENST00000583697 CFAP70Q5T0N1 1121 aa12.8□□□□□ -0.36
CDK5RAP3-229ENST00000583697 ATAD2Q6PL18 1390 aa12.8□□□□□ -0.36
CDK5RAP3-229ENST00000583697 ATRNO75882 1429 aa12.79□□□□□ -0.36
CDK5RAP3-229ENST00000583697 ANKARQ7Z5J8 1434 aa12.79□□□□□ -0.36
CDK5RAP3-229ENST00000583697 ITSN1Q15811 1721 aa12.79□□□□□ -0.36
CDK5RAP3-229ENST00000583697 ARHGEF28Q8N1W1 1705 aaKnown RBP12.79□□□□□ -0.36
CDK5RAP3-229ENST00000583697 SIRT1Q96EB6 747 aa12.79□□□□□ -0.36
CDK5RAP3-229ENST00000583697 EIF3AQ14152 1382 aaKnown RBP12.79□□□□□ -0.36
CDK5RAP3-229ENST00000583697 HAP1P54257 671 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-229ENST00000583697 SAFB2Q14151 953 aaKnown RBP eCLIP12.78□□□□□ -0.36
CDK5RAP3-229ENST00000583697 FNBP4Q8N3X1 1017 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-229ENST00000583697 PRAM1Q96QH2 718 aa12.78□□□□□ -0.36
CDK5RAP3-229ENST00000583697 POGKQ9P215 609 aa12.78□□□□□ -0.36
CDK5RAP3-229ENST00000583697 NWD2Q9ULI1 1742 aa12.78□□□□□ -0.36
CDK5RAP3-229ENST00000583697 TULP4Q9NRJ4 1543 aa12.78□□□□□ -0.36
CDK5RAP3-229ENST00000583697 SPATA31A3Q5VYP0 1347 aa12.77□□□□□ -0.37
CDK5RAP3-229ENST00000583697 TRPM3Q9HCF6 1732 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP3-229ENST00000583697 KRT28Q7Z3Y7 464 aa12.76□□□□□ -0.37
CDK5RAP3-229ENST00000583697 PHF8Q9UPP1 1060 aa12.76□□□□□ -0.37
CDK5RAP3-229ENST00000583697 BCL9LQ86UU0 1499 aa12.76□□□□□ -0.37
CDK5RAP3-229ENST00000583697 ARHGEF10O15013 1369 aa12.75□□□□□ -0.37
CDK5RAP3-229ENST00000583697 SLIT2O94813 1529 aa12.75□□□□□ -0.37
CDK5RAP3-229ENST00000583697 GLI3P10071 1580 aa12.75□□□□□ -0.37
CDK5RAP3-229ENST00000583697 PSME1Q06323 249 aa12.75□□□□□ -0.37
CDK5RAP3-229ENST00000583697 KIAA1210Q9ULL0 1709 aa12.74□□□□□ -0.37
CDK5RAP3-229ENST00000583697 ALS2Q96Q42 1657 aa12.74□□□□□ -0.37
CDK5RAP3-229ENST00000583697 SBNO1A3KN83 1393 aa12.74□□□□□ -0.37
CDK5RAP3-229ENST00000583697 DCAF11Q8TEB1 546 aa12.74□□□□□ -0.37
CDK5RAP3-229ENST00000583697 TRAK1Q9UPV9 953 aa12.74□□□□□ -0.37
CDK5RAP3-229ENST00000583697 LMOD2Q6P5Q4 547 aa12.73□□□□□ -0.37
CDK5RAP3-229ENST00000583697 KDM2AQ9Y2K7 1162 aa12.73□□□□□ -0.37
CDK5RAP3-229ENST00000583697 RALGAPBQ86X10 1494 aa12.72□□□□□ -0.37
CDK5RAP3-229ENST00000583697 NRAPQ86VF7 1730 aa12.72□□□□□ -0.37
CDK5RAP3-229ENST00000583697 CRYBG1Q9Y4K1 1723 aa12.72□□□□□ -0.37
CDK5RAP3-229ENST00000583697 PLEKHG5O94827 1062 aa12.72□□□□□ -0.37
CDK5RAP3-229ENST00000583697 STAC3Q96MF2 364 aa12.72□□□□□ -0.37
CDK5RAP3-229ENST00000583697 GPRASP1Q5JY77 1395 aa12.71□□□□□ -0.37
CDK5RAP3-229ENST00000583697 TOPAZ1Q8N9V7 1692 aa12.71□□□□□ -0.37
CDK5RAP3-229ENST00000583697 MINK1Q8N4C8 1332 aaPredicted RBP12.71□□□□□ -0.37
CDK5RAP3-229ENST00000583697 PMFBP1Q8TBY8 1022 aa12.71□□□□□ -0.37
CDK5RAP3-229ENST00000583697 GJD4Q96KN9 370 aaPredicted RBP12.71□□□□□ -0.37
CDK5RAP3-229ENST00000583697 HIRIP3Q9BW71 556 aaPredicted RBP12.71□□□□□ -0.37
CDK5RAP3-229ENST00000583697 COL14A1Q05707 1796 aaKnown RBP12.71□□□□□ -0.38
CDK5RAP3-229ENST00000583697 PHRF1Q9P1Y6 1649 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-229ENST00000583697 BRWD3Q6RI45 1802 aa12.7□□□□□ -0.38
CDK5RAP3-229ENST00000583697 HRCP23327 699 aa12.7□□□□□ -0.38
CDK5RAP3-229ENST00000583697 UNC5CLQ8IV45 518 aa12.7□□□□□ -0.38
CDK5RAP3-229ENST00000583697 ATP7BP35670 1465 aa12.7□□□□□ -0.38
CDK5RAP3-229ENST00000583697 CABLES1Q8TDN4 633 aa12.68□□□□□ -0.38
CDK5RAP3-229ENST00000583697 EP400Q96L91 3159 aa12.68□□□□□ -0.38
CDK5RAP3-229ENST00000583697 WASLO00401 505 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP3-229ENST00000583697 CCDC9Q9Y3X0 531 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-229ENST00000583697 QRICH2Q9H0J4 1663 aa12.67□□□□□ -0.38
CDK5RAP3-229ENST00000583697 PRR36Q9H6K5 1346 aa12.66□□□□□ -0.38
CDK5RAP3-229ENST00000583697 NGDNQ8NEJ9 315 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-229ENST00000583697 BLMP54132 1417 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-229ENST00000583697 A0A0G2JS52 829 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms