RNA–Protein interactions for RNA: ENST00000583463.5

SPECC1-220, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-220ENST00000583463 MARF1Q9Y4F3 1742 aaKnown RBP22.75■■□□□ 1.23
SPECC1-220ENST00000583463 SOS2Q07890 1332 aaPredicted RBP22.75■■□□□ 1.23
SPECC1-220ENST00000583463 EP400Q96L91 3159 aa22.74■■□□□ 1.23
SPECC1-220ENST00000583463 COL22A1Q8NFW1 1626 aaPredicted RBP22.74■■□□□ 1.23
SPECC1-220ENST00000583463 ATAD2Q6PL18 1390 aa22.74■■□□□ 1.23
SPECC1-220ENST00000583463 ATRNO75882 1429 aa22.74■■□□□ 1.23
SPECC1-220ENST00000583463 FOXD1Q16676 465 aa22.71■■□□□ 1.23
SPECC1-220ENST00000583463 XPCQ01831 940 aaPredicted RBP22.7■■□□□ 1.22
SPECC1-220ENST00000583463 FNBP4Q8N3X1 1017 aaPredicted RBP22.7■■□□□ 1.22
SPECC1-220ENST00000583463 BRWD3Q6RI45 1802 aa22.69■■□□□ 1.22
SPECC1-220ENST00000583463 TRPC5Q9UL62 973 aaPredicted RBP22.69■■□□□ 1.22
SPECC1-220ENST00000583463 BCL9LQ86UU0 1499 aa22.68■■□□□ 1.22
SPECC1-220ENST00000583463 ANKRD30BQ9BXX2 1392 aa22.67■■□□□ 1.22
SPECC1-220ENST00000583463 MYOM2P54296 1465 aa22.66■■□□□ 1.22
SPECC1-220ENST00000583463 PTCH1Q13635 1447 aa22.66■■□□□ 1.22
SPECC1-220ENST00000583463 PPLO60437 1756 aa22.66■■□□□ 1.22
SPECC1-220ENST00000583463 PXDNQ92626 1479 aa22.65■■□□□ 1.22
SPECC1-220ENST00000583463 ZRANB1Q9UGI0 708 aa22.64■■□□□ 1.21
SPECC1-220ENST00000583463 CCDC144AA2RUR9 1427 aa22.64■■□□□ 1.21
SPECC1-220ENST00000583463 GLI3P10071 1580 aa22.63■■□□□ 1.21
SPECC1-220ENST00000583463 NUTM2FA1L443 756 aa22.62■■□□□ 1.21
SPECC1-220ENST00000583463 ESCO1Q5FWF5 840 aa22.6■■□□□ 1.21
SPECC1-220ENST00000583463 CCER1Q8TC90 406 aaPredicted RBP22.6■■□□□ 1.21
SPECC1-220ENST00000583463 CLSPNQ9HAW4 1339 aa22.59■■□□□ 1.21
SPECC1-220ENST00000583463 FOXO3O43524 673 aa22.59■■□□□ 1.21
SPECC1-220ENST00000583463 RGPD8O14715 1765 aaPredicted RBP22.58■■□□□ 1.21
SPECC1-220ENST00000583463 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.58■■□□□ 1.21
SPECC1-220ENST00000583463 DEFB132Q7Z7B7 95 aa22.57■■□□□ 1.2
SPECC1-220ENST00000583463 GJD4Q96KN9 370 aaPredicted RBP22.57■■□□□ 1.2
SPECC1-220ENST00000583463 CDC42BPGQ6DT37 1551 aa22.57■■□□□ 1.2
SPECC1-220ENST00000583463 PRAG1Q86YV5 1406 aa22.56■■□□□ 1.2
SPECC1-220ENST00000583463 RALGAPBQ86X10 1494 aa22.54■■□□□ 1.2
SPECC1-220ENST00000583463 WAPLQ7Z5K2 1190 aa22.54■■□□□ 1.2
SPECC1-220ENST00000583463 PLEKHH1Q9ULM0 1364 aa22.53■■□□□ 1.2
SPECC1-220ENST00000583463 PLEKHG5O94827 1062 aa22.53■■□□□ 1.2
SPECC1-220ENST00000583463 VGFO15240 615 aaPredicted RBP22.52■■□□□ 1.2
SPECC1-220ENST00000583463 NPHP3Q7Z494 1330 aa22.52■■□□□ 1.2
SPECC1-220ENST00000583463 STK26Q9P289 416 aa22.51■■□□□ 1.19
SPECC1-220ENST00000583463 SLIT2O94813 1529 aa22.51■■□□□ 1.19
SPECC1-220ENST00000583463 FMN2Q9NZ56 1722 aa22.5■■□□□ 1.19
SPECC1-220ENST00000583463 ADGRF5Q8IZF2 1346 aa22.5■■□□□ 1.19
SPECC1-220ENST00000583463 SPATA31E1Q6ZUB1 1445 aa22.49■■□□□ 1.19
SPECC1-220ENST00000583463 USP32Q8NFA0 1604 aa22.49■■□□□ 1.19
SPECC1-220ENST00000583463 PLCH1Q4KWH8 1693 aa22.49■■□□□ 1.19
SPECC1-220ENST00000583463 CCDC125Q86Z20 511 aa22.47■■□□□ 1.19
SPECC1-220ENST00000583463 UNC5CLQ8IV45 518 aa22.47■■□□□ 1.19
SPECC1-220ENST00000583463 CABLES1Q8TDN4 633 aa22.47■■□□□ 1.19
SPECC1-220ENST00000583463 SIN3AQ96ST3 1273 aa22.47■■□□□ 1.19
SPECC1-220ENST00000583463 ABCA3Q99758 1704 aa22.47■■□□□ 1.19
SPECC1-220ENST00000583463 BLMP54132 1417 aaPredicted RBP22.47■■□□□ 1.19
SPECC1-220ENST00000583463 IFT172Q9UG01 1749 aa22.46■■□□□ 1.19
SPECC1-220ENST00000583463 TMEM132EQ6IEE7 984 aa22.46■■□□□ 1.19
SPECC1-220ENST00000583463 SPATA31A3Q5VYP0 1347 aa22.44■■□□□ 1.18
SPECC1-220ENST00000583463 KNDC1Q76NI1 1749 aa22.43■■□□□ 1.18
SPECC1-220ENST00000583463 NEUROD1Q13562 356 aa22.43■■□□□ 1.18
SPECC1-220ENST00000583463 SEPT12Q8IYM1 358 aa22.43■■□□□ 1.18
SPECC1-220ENST00000583463 RPGRIP1LQ68CZ1 1315 aa22.42■■□□□ 1.18
SPECC1-220ENST00000583463 LRP5O75197 1615 aa22.42■■□□□ 1.18
SPECC1-220ENST00000583463 PSDA5PKW4 1024 aaPredicted RBP22.41■■□□□ 1.18
SPECC1-220ENST00000583463 KIF1AQ12756 1690 aa22.4■■□□□ 1.18
SPECC1-220ENST00000583463 RGL3Q3MIN7 710 aa22.4■■□□□ 1.18
SPECC1-220ENST00000583463 KRT28Q7Z3Y7 464 aa22.39■■□□□ 1.17
SPECC1-220ENST00000583463 TECPR2O15040 1411 aa22.39■■□□□ 1.17
SPECC1-220ENST00000583463 TONSLQ96HA7 1378 aa22.38■■□□□ 1.17
SPECC1-220ENST00000583463 LRPPRCP42704 1394 aaKnown RBP22.38■■□□□ 1.17
SPECC1-220ENST00000583463 NWD2Q9ULI1 1742 aa22.37■■□□□ 1.17
SPECC1-220ENST00000583463 NRAPQ86VF7 1730 aa22.37■■□□□ 1.17
SPECC1-220ENST00000583463 FAM182BQ5T319 152 aa22.34■■□□□ 1.17
SPECC1-220ENST00000583463 CCDC9Q9Y3X0 531 aaKnown RBP22.34■■□□□ 1.17
SPECC1-220ENST00000583463 TNS3Q68CZ2 1445 aa22.33■■□□□ 1.17
SPECC1-220ENST00000583463 VPS72Q15906 364 aa22.33■■□□□ 1.17
SPECC1-220ENST00000583463 ABCC11Q96J66 1382 aa22.33■■□□□ 1.17
SPECC1-220ENST00000583463 KRT27Q7Z3Y8 459 aa22.32■■□□□ 1.16
SPECC1-220ENST00000583463 YTHDC2Q9H6S0 1430 aaKnown RBP22.31■■□□□ 1.16
SPECC1-220ENST00000583463 FAM83GA6ND36 823 aa22.31■■□□□ 1.16
SPECC1-220ENST00000583463 LMOD2Q6P5Q4 547 aa22.31■■□□□ 1.16
SPECC1-220ENST00000583463 TIMELESSQ9UNS1 1208 aa22.31■■□□□ 1.16
SPECC1-220ENST00000583463 ONECUT3O60422 494 aaPredicted RBP22.3■■□□□ 1.16
SPECC1-220ENST00000583463 HAP1P54257 671 aaPredicted RBP22.3■■□□□ 1.16
SPECC1-220ENST00000583463 SF3B2Q13435 895 aaKnown RBP22.3■■□□□ 1.16
SPECC1-220ENST00000583463 L3MBTL2Q969R5 705 aa22.3■■□□□ 1.16
SPECC1-220ENST00000583463 PIK3C2GO75747 1445 aa22.3■■□□□ 1.16
SPECC1-220ENST00000583463 SAFB2Q14151 953 aaKnown RBP eCLIP22.29■■□□□ 1.16
SPECC1-220ENST00000583463 PHF8Q9UPP1 1060 aa22.29■■□□□ 1.16
SPECC1-220ENST00000583463 STAC3Q96MF2 364 aa22.28■■□□□ 1.16
SPECC1-220ENST00000583463 TRPM3Q9HCF6 1732 aaPredicted RBP22.28■■□□□ 1.16
SPECC1-220ENST00000583463 NRXN1Q9ULB1 1477 aa22.28■■□□□ 1.16
SPECC1-220ENST00000583463 FAM98CQ17RN3 349 aaKnown RBP22.27■■□□□ 1.16
SPECC1-220ENST00000583463 DCAF11Q8TEB1 546 aa22.27■■□□□ 1.16
SPECC1-220ENST00000583463 TNS1Q9HBL0 1735 aaKnown RBP22.26■■□□□ 1.15
SPECC1-220ENST00000583463 A0A0G2JS52 829 aa22.26■■□□□ 1.15
SPECC1-220ENST00000583463 MYT1Q01538 1121 aa22.26■■□□□ 1.15
SPECC1-220ENST00000583463 EN1Q05925 392 aaPredicted RBP22.26■■□□□ 1.15
SPECC1-220ENST00000583463 PMFBP1Q8TBY8 1022 aa22.26■■□□□ 1.15
SPECC1-220ENST00000583463 RGPD1P0DJD0 1748 aa22.24■■□□□ 1.15
SPECC1-220ENST00000583463 ALS2Q96Q42 1657 aa22.23■■□□□ 1.15
SPECC1-220ENST00000583463 CRYBG1Q9Y4K1 1723 aa22.23■■□□□ 1.15
SPECC1-220ENST00000583463 CFAP70Q5T0N1 1121 aa22.23■■□□□ 1.15
SPECC1-220ENST00000583463 KDM2AQ9Y2K7 1162 aa22.22■■□□□ 1.15
SPECC1-220ENST00000583463 SBNO1A3KN83 1393 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms