RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 NRXN3Q9Y4C0 1643 aa19.92■□□□□ 0.78
MKS1-211ENST00000581761 SCAF1Q9H7N4 1312 aaKnown RBP19.92■□□□□ 0.78
MKS1-211ENST00000581761 MYOM1P52179 1685 aa19.91■□□□□ 0.78
MKS1-211ENST00000581761 KCNA6P17658 529 aa19.9■□□□□ 0.78
MKS1-211ENST00000581761 STK26Q9P289 416 aa19.9■□□□□ 0.78
MKS1-211ENST00000581761 MYBBP1AQ9BQG0 1328 aaKnown RBP19.9■□□□□ 0.78
MKS1-211ENST00000581761 YTHDC2Q9H6S0 1430 aaKnown RBP19.9■□□□□ 0.78
MKS1-211ENST00000581761 PARD3Q8TEW0 1356 aa19.89■□□□□ 0.77
MKS1-211ENST00000581761 FAM9BQ8IZU0 186 aa19.88■□□□□ 0.77
MKS1-211ENST00000581761 LRRC7Q96NW7 1537 aa19.87■□□□□ 0.77
MKS1-211ENST00000581761 METP08581 1390 aa19.87■□□□□ 0.77
MKS1-211ENST00000581761 KNSTRNQ9Y448 316 aa19.87■□□□□ 0.77
MKS1-211ENST00000581761 PTPRUQ92729 1446 aa19.86■□□□□ 0.77
MKS1-211ENST00000581761 CC2D1BQ5T0F9 858 aaKnown RBP19.86■□□□□ 0.77
MKS1-211ENST00000581761 GTF3C3Q9Y5Q9 886 aa19.86■□□□□ 0.77
MKS1-211ENST00000581761 BRD4O60885 1362 aaPredicted RBP19.85■□□□□ 0.77
MKS1-211ENST00000581761 TOM1O60784 492 aa19.85■□□□□ 0.77
MKS1-211ENST00000581761 HNRNPUQ00839 825 aaKnown RBP eCLIP19.85■□□□□ 0.77
MKS1-211ENST00000581761 DIP2AQ14689 1571 aa19.85■□□□□ 0.77
MKS1-211ENST00000581761 EVC2Q86UK5 1308 aa19.84■□□□□ 0.77
MKS1-211ENST00000581761 NWD1Q149M9 1564 aa19.84■□□□□ 0.77
MKS1-211ENST00000581761 PIP4K2BP78356 416 aa19.84■□□□□ 0.77
MKS1-211ENST00000581761 TMC1Q8TDI8 760 aa19.84■□□□□ 0.77
MKS1-211ENST00000581761 RBM33Q96EV2 1170 aaKnown RBP19.84■□□□□ 0.77
MKS1-211ENST00000581761 SETD1AO15047 1707 aaKnown RBP19.84■□□□□ 0.77
MKS1-211ENST00000581761 TULP4Q9NRJ4 1543 aa19.83■□□□□ 0.77
MKS1-211ENST00000581761 POGKQ9P215 609 aa19.83■□□□□ 0.77
MKS1-211ENST00000581761 LRPPRCP42704 1394 aaKnown RBP19.83■□□□□ 0.76
MKS1-211ENST00000581761 PIK3R4Q99570 1358 aa19.83■□□□□ 0.76
MKS1-211ENST00000581761 CHD2O14647 1828 aaKnown RBP19.82■□□□□ 0.76
MKS1-211ENST00000581761 SAFB2Q14151 953 aaKnown RBP eCLIP19.82■□□□□ 0.76
MKS1-211ENST00000581761 DLC1Q96QB1 1528 aa19.81■□□□□ 0.76
MKS1-211ENST00000581761 NLRP13Q86W25 1043 aa19.81■□□□□ 0.76
MKS1-211ENST00000581761 PUS7Q96PZ0 661 aaKnown RBP19.81■□□□□ 0.76
MKS1-211ENST00000581761 PRAM1Q96QH2 718 aa19.81■□□□□ 0.76
MKS1-211ENST00000581761 AMOTL2Q9Y2J4 779 aa19.81■□□□□ 0.76
MKS1-211ENST00000581761 TMEM94Q12767 1356 aa19.8■□□□□ 0.76
MKS1-211ENST00000581761 AMER1Q5JTC6 1135 aaPredicted RBP19.79■□□□□ 0.76
MKS1-211ENST00000581761 PROSER2Q86WR7 435 aaPredicted RBP19.79■□□□□ 0.76
MKS1-211ENST00000581761 NKTRP30414 1462 aaKnown RBP19.79■□□□□ 0.76
MKS1-211ENST00000581761 NPC1L1Q9UHC9 1359 aa19.78■□□□□ 0.76
MKS1-211ENST00000581761 MINK1Q8N4C8 1332 aaPredicted RBP19.77■□□□□ 0.76
MKS1-211ENST00000581761 ABCC11Q96J66 1382 aa19.77■□□□□ 0.76
MKS1-211ENST00000581761 XIRP1Q702N8 1843 aaKnown RBP19.76■□□□□ 0.75
MKS1-211ENST00000581761 PNISRQ8TF01 805 aaKnown RBP19.76■□□□□ 0.75
MKS1-211ENST00000581761 CABP2Q9NPB3 220 aa19.76■□□□□ 0.75
MKS1-211ENST00000581761 XRN1Q8IZH2 1706 aaKnown RBP19.75■□□□□ 0.75
MKS1-211ENST00000581761 SRPK2P78362 688 aaKnown RBP19.74■□□□□ 0.75
MKS1-211ENST00000581761 SLC12A5Q9H2X9 1139 aa19.74■□□□□ 0.75
MKS1-211ENST00000581761 HSPA1LP34931 641 aa19.73■□□□□ 0.75
MKS1-211ENST00000581761 CARD14Q9BXL6 1004 aa19.73■□□□□ 0.75
MKS1-211ENST00000581761 NSD3Q9BZ95 1437 aa19.73■□□□□ 0.75
MKS1-211ENST00000581761 KNDC1Q76NI1 1749 aa19.72■□□□□ 0.75
MKS1-211ENST00000581761 ATAD2Q6PL18 1390 aa19.71■□□□□ 0.75
MKS1-211ENST00000581761 PLEKHH1Q9ULM0 1364 aa19.71■□□□□ 0.75
MKS1-211ENST00000581761 ROBO2Q9HCK4 1378 aa19.7■□□□□ 0.74
MKS1-211ENST00000581761 NINLQ9Y2I6 1382 aa19.7■□□□□ 0.74
MKS1-211ENST00000581761 PPP2R1AP30153 589 aa19.7■□□□□ 0.74
MKS1-211ENST00000581761 WAPLQ7Z5K2 1190 aa19.7■□□□□ 0.74
MKS1-211ENST00000581761 ZBED9Q6R2W3 1325 aa19.7■□□□□ 0.74
MKS1-211ENST00000581761 ANKRD36BQ8N2N9 1353 aa19.7■□□□□ 0.74
MKS1-211ENST00000581761 TECPR2O15040 1411 aa19.69■□□□□ 0.74
MKS1-211ENST00000581761 CDK19Q9BWU1 502 aa19.69■□□□□ 0.74
MKS1-211ENST00000581761 SIRT1Q96EB6 747 aa19.68■□□□□ 0.74
MKS1-211ENST00000581761 FAM135BQ49AJ0 1406 aa19.68■□□□□ 0.74
MKS1-211ENST00000581761 NCOA3Q9Y6Q9 1424 aa19.68■□□□□ 0.74
MKS1-211ENST00000581761 USP32Q8NFA0 1604 aa19.67■□□□□ 0.74
MKS1-211ENST00000581761 PTCH1Q13635 1447 aa19.66■□□□□ 0.74
MKS1-211ENST00000581761 MSH6P52701 1360 aa19.63■□□□□ 0.73
MKS1-211ENST00000581761 CGNL1Q0VF96 1302 aa19.63■□□□□ 0.73
MKS1-211ENST00000581761 C19orf44Q9H6X5 657 aa19.63■□□□□ 0.73
MKS1-211ENST00000581761 A0A1W2PP64 1363 aa19.62■□□□□ 0.73
MKS1-211ENST00000581761 C14orf37Q86TY3 774 aa19.62■□□□□ 0.73
MKS1-211ENST00000581761 MORC1Q86VD1 984 aa19.62■□□□□ 0.73
MKS1-211ENST00000581761 TERF2IPQ9NYB0 399 aa19.61■□□□□ 0.73
MKS1-211ENST00000581761 NSD2O96028 1365 aa19.6■□□□□ 0.73
MKS1-211ENST00000581761 INSRP06213 1382 aa19.6■□□□□ 0.73
MKS1-211ENST00000581761 WASLO00401 505 aaPredicted RBP19.6■□□□□ 0.73
MKS1-211ENST00000581761 HDGFL2Q7Z4V5 671 aaPredicted RBP19.6■□□□□ 0.73
MKS1-211ENST00000581761 ADGRL3Q9HAR2 1447 aa19.59■□□□□ 0.73
MKS1-211ENST00000581761 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.59■□□□□ 0.73
MKS1-211ENST00000581761 SLAIN2Q9P270 581 aa19.58■□□□□ 0.72
MKS1-211ENST00000581761 CD163L1Q9NR16 1453 aa19.58■□□□□ 0.72
MKS1-211ENST00000581761 WDR43Q15061 677 aaKnown RBP eCLIP19.57■□□□□ 0.72
MKS1-211ENST00000581761 CABP1Q9NZU7 370 aa19.57■□□□□ 0.72
MKS1-211ENST00000581761 BLMP54132 1417 aaPredicted RBP19.57■□□□□ 0.72
MKS1-211ENST00000581761 NALCNQ8IZF0 1738 aa19.56■□□□□ 0.72
MKS1-211ENST00000581761 ATP7BP35670 1465 aa19.55■□□□□ 0.72
MKS1-211ENST00000581761 ATF3P18847 181 aa19.55■□□□□ 0.72
MKS1-211ENST00000581761 DCCP43146 1447 aa19.55■□□□□ 0.72
MKS1-211ENST00000581761 CADPS2Q86UW7 1296 aa19.55■□□□□ 0.72
MKS1-211ENST00000581761 ADGRB2O60241 1585 aa19.54■□□□□ 0.72
MKS1-211ENST00000581761 SENP3-EIF4A1A0A087X0R7 540 aa19.53■□□□□ 0.72
MKS1-211ENST00000581761 MST1RQ04912 1400 aa19.52■□□□□ 0.72
MKS1-211ENST00000581761 PPIP5K1Q6PFW1 1433 aa19.52■□□□□ 0.72
MKS1-211ENST00000581761 NEFLP07196 543 aa19.52■□□□□ 0.72
MKS1-211ENST00000581761 TNNT2P45379 298 aaPredicted RBP19.52■□□□□ 0.72
MKS1-211ENST00000581761 NUDT16Q96DE0 195 aaKnown RBP19.52■□□□□ 0.72
MKS1-211ENST00000581761 ROBO1Q9Y6N7 1651 aa19.52■□□□□ 0.71
MKS1-211ENST00000581761 ILDR2Q71H61 639 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms