RNA–Protein interactions for RNA: ENST00000581080.1

RARA-AS1-201, RARA antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene RARA-AS1, Length 1,790 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-AS1-201ENST00000581080 TULP4Q9NRJ4 1543 aa32.3■■■□□ 2.76
RARA-AS1-201ENST00000581080 PUS7Q96PZ0 661 aaKnown RBP32.3■■■□□ 2.76
RARA-AS1-201ENST00000581080 PTCH1Q13635 1447 aa32.28■■■□□ 2.76
RARA-AS1-201ENST00000581080 MIER1Q8N108 512 aa32.28■■■□□ 2.76
RARA-AS1-201ENST00000581080 XRN1Q8IZH2 1706 aaKnown RBP32.28■■■□□ 2.76
RARA-AS1-201ENST00000581080 CHD2O14647 1828 aaKnown RBP32.26■■■□□ 2.75
RARA-AS1-201ENST00000581080 KCNA6P17658 529 aa32.25■■■□□ 2.75
RARA-AS1-201ENST00000581080 CABP2Q9NPB3 220 aa32.21■■■□□ 2.75
RARA-AS1-201ENST00000581080 SRPK2P78362 688 aaKnown RBP32.19■■■□□ 2.74
RARA-AS1-201ENST00000581080 CDK19Q9BWU1 502 aa32.19■■■□□ 2.74
RARA-AS1-201ENST00000581080 PANK3Q9H999 370 aa32.19■■■□□ 2.74
RARA-AS1-201ENST00000581080 MYOM1P52179 1685 aa32.19■■■□□ 2.74
RARA-AS1-201ENST00000581080 ANP32CO43423 234 aa32.19■■■□□ 2.74
RARA-AS1-201ENST00000581080 STRCQ7RTU9 1775 aa32.18■■■□□ 2.74
RARA-AS1-201ENST00000581080 WASLO00401 505 aaPredicted RBP32.16■■■□□ 2.74
RARA-AS1-201ENST00000581080 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.16■■■□□ 2.74
RARA-AS1-201ENST00000581080 PER1O15534 1290 aaPredicted RBP32.15■■■□□ 2.74
RARA-AS1-201ENST00000581080 ATAD2Q6PL18 1390 aa32.14■■■□□ 2.74
RARA-AS1-201ENST00000581080 ADGRB2O60241 1585 aa32.13■■■□□ 2.73
RARA-AS1-201ENST00000581080 NWD1Q149M9 1564 aa32.12■■■□□ 2.73
RARA-AS1-201ENST00000581080 TMC1Q8TDI8 760 aa32.12■■■□□ 2.73
RARA-AS1-201ENST00000581080 SLC12A5Q9H2X9 1139 aa32.12■■■□□ 2.73
RARA-AS1-201ENST00000581080 NINLQ9Y2I6 1382 aa32.09■■■□□ 2.73
RARA-AS1-201ENST00000581080 PRKRIP1Q9H875 184 aaPredicted RBP32.05■■■□□ 2.72
RARA-AS1-201ENST00000581080 KNSTRNQ9Y448 316 aa32.02■■■□□ 2.72
RARA-AS1-201ENST00000581080 NKTRP30414 1462 aaKnown RBP32.02■■■□□ 2.72
RARA-AS1-201ENST00000581080 NUDT16Q96DE0 195 aaKnown RBP32.01■■■□□ 2.71
RARA-AS1-201ENST00000581080 CARD14Q9BXL6 1004 aa32■■■□□ 2.71
RARA-AS1-201ENST00000581080 ANKRD36BQ8N2N9 1353 aa32■■■□□ 2.71
RARA-AS1-201ENST00000581080 CABP1Q9NZU7 370 aa31.99■■■□□ 2.71
RARA-AS1-201ENST00000581080 RBM33Q96EV2 1170 aaKnown RBP31.99■■■□□ 2.71
RARA-AS1-201ENST00000581080 CCDC61Q9Y6R9 512 aa31.99■■■□□ 2.71
RARA-AS1-201ENST00000581080 PROSER2Q86WR7 435 aaPredicted RBP31.97■■■□□ 2.71
RARA-AS1-201ENST00000581080 DMRT2Q9Y5R5 561 aa31.97■■■□□ 2.71
RARA-AS1-201ENST00000581080 ATP7BP35670 1465 aa31.97■■■□□ 2.71
RARA-AS1-201ENST00000581080 PRR36Q9H6K5 1346 aa31.96■■■□□ 2.71
RARA-AS1-201ENST00000581080 STRCP1A6NGW2 1772 aa31.95■■■□□ 2.71
RARA-AS1-201ENST00000581080 NALCNQ8IZF0 1738 aa31.95■■■□□ 2.71
RARA-AS1-201ENST00000581080 TERF2IPQ9NYB0 399 aa31.95■■■□□ 2.71
RARA-AS1-201ENST00000581080 ADGRL3Q9HAR2 1447 aa31.95■■■□□ 2.7
RARA-AS1-201ENST00000581080 CNGB1Q14028 1251 aaPredicted RBP31.94■■■□□ 2.7
RARA-AS1-201ENST00000581080 AMER1Q5JTC6 1135 aaPredicted RBP31.94■■■□□ 2.7
RARA-AS1-201ENST00000581080 PPIP5K1Q6PFW1 1433 aa31.94■■■□□ 2.7
RARA-AS1-201ENST00000581080 CD163L1Q9NR16 1453 aa31.93■■■□□ 2.7
RARA-AS1-201ENST00000581080 CCER2I3L3R5 266 aa31.93■■■□□ 2.7
RARA-AS1-201ENST00000581080 A0A1W2PP64 1363 aa31.92■■■□□ 2.7
RARA-AS1-201ENST00000581080 KTN1Q86UP2 1357 aaKnown RBP31.92■■■□□ 2.7
RARA-AS1-201ENST00000581080 CDC42BPGQ6DT37 1551 aa31.91■■■□□ 2.7
RARA-AS1-201ENST00000581080 NPC1L1Q9UHC9 1359 aa31.91■■■□□ 2.7
RARA-AS1-201ENST00000581080 NUTM2FA1L443 756 aa31.91■■■□□ 2.7
RARA-AS1-201ENST00000581080 NSD3Q9BZ95 1437 aa31.9■■■□□ 2.7
RARA-AS1-201ENST00000581080 RALBP1Q15311 655 aa31.9■■■□□ 2.7
RARA-AS1-201ENST00000581080 CC2D1BQ5T0F9 858 aaKnown RBP31.9■■■□□ 2.7
RARA-AS1-201ENST00000581080 C14orf37Q86TY3 774 aa31.9■■■□□ 2.7
RARA-AS1-201ENST00000581080 HDGFL2Q7Z4V5 671 aaPredicted RBP31.89■■■□□ 2.7
RARA-AS1-201ENST00000581080 ANKARQ7Z5J8 1434 aa31.87■■■□□ 2.69
RARA-AS1-201ENST00000581080 USP32Q8NFA0 1604 aa31.87■■■□□ 2.69
RARA-AS1-201ENST00000581080 PARD3Q8TEW0 1356 aa31.87■■■□□ 2.69
RARA-AS1-201ENST00000581080 NCOA3Q9Y6Q9 1424 aa31.87■■■□□ 2.69
RARA-AS1-201ENST00000581080 FMN2Q9NZ56 1722 aa31.87■■■□□ 2.69
RARA-AS1-201ENST00000581080 TOPAZ1Q8N9V7 1692 aa31.86■■■□□ 2.69
RARA-AS1-201ENST00000581080 TMEM94Q12767 1356 aa31.86■■■□□ 2.69
RARA-AS1-201ENST00000581080 CPSF1Q10570 1443 aaKnown RBP31.85■■■□□ 2.69
RARA-AS1-201ENST00000581080 ZNF335Q9H4Z2 1342 aaPredicted RBP31.85■■■□□ 2.69
RARA-AS1-201ENST00000581080 PLEKHG3A1L390 1219 aa31.84■■■□□ 2.69
RARA-AS1-201ENST00000581080 C19orf44Q9H6X5 657 aa31.84■■■□□ 2.69
RARA-AS1-201ENST00000581080 CGNL1Q0VF96 1302 aa31.82■■■□□ 2.68
RARA-AS1-201ENST00000581080 ITSN1Q15811 1721 aa31.8■■■□□ 2.68
RARA-AS1-201ENST00000581080 ZNF692Q9BU19 519 aaPredicted RBP31.8■■■□□ 2.68
RARA-AS1-201ENST00000581080 RGPD8O14715 1765 aaPredicted RBP31.8■■■□□ 2.68
RARA-AS1-201ENST00000581080 MYBBP1AQ9BQG0 1328 aaKnown RBP31.78■■■□□ 2.68
RARA-AS1-201ENST00000581080 ACEP12821 1306 aa31.77■■■□□ 2.68
RARA-AS1-201ENST00000581080 LRRC7Q96NW7 1537 aa31.75■■■□□ 2.67
RARA-AS1-201ENST00000581080 AKAP12Q02952 1782 aa31.75■■■□□ 2.67
RARA-AS1-201ENST00000581080 NSD2O96028 1365 aa31.74■■■□□ 2.67
RARA-AS1-201ENST00000581080 DCCP43146 1447 aa31.74■■■□□ 2.67
RARA-AS1-201ENST00000581080 PMFBP1Q8TBY8 1022 aa31.73■■■□□ 2.67
RARA-AS1-201ENST00000581080 POLR3AO14802 1390 aaPredicted RBP31.73■■■□□ 2.67
RARA-AS1-201ENST00000581080 EDC4Q6P2E9 1401 aaKnown RBP31.73■■■□□ 2.67
RARA-AS1-201ENST00000581080 CCDC184Q52MB2 194 aa31.73■■■□□ 2.67
RARA-AS1-201ENST00000581080 MON2Q7Z3U7 1717 aa31.72■■■□□ 2.67
RARA-AS1-201ENST00000581080 FYB1O15117 783 aa31.71■■■□□ 2.67
RARA-AS1-201ENST00000581080 ATF3P18847 181 aa31.71■■■□□ 2.67
RARA-AS1-201ENST00000581080 XIRP1Q702N8 1843 aaKnown RBP31.71■■■□□ 2.67
RARA-AS1-201ENST00000581080 NLRP13Q86W25 1043 aa31.69■■■□□ 2.66
RARA-AS1-201ENST00000581080 NGDNQ8NEJ9 315 aaKnown RBP31.69■■■□□ 2.66
RARA-AS1-201ENST00000581080 MRS2Q9HD23 443 aa31.69■■■□□ 2.66
RARA-AS1-201ENST00000581080 MSH6P52701 1360 aa31.69■■■□□ 2.66
RARA-AS1-201ENST00000581080 AEBP2Q6ZN18 517 aaPredicted RBP31.68■■■□□ 2.66
RARA-AS1-201ENST00000581080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.68■■■□□ 2.66
RARA-AS1-201ENST00000581080 PHF8Q9UPP1 1060 aa31.68■■■□□ 2.66
RARA-AS1-201ENST00000581080 USP6P35125 1406 aa31.67■■■□□ 2.66
RARA-AS1-201ENST00000581080 ESCO1Q5FWF5 840 aa31.67■■■□□ 2.66
RARA-AS1-201ENST00000581080 CADPS2Q86UW7 1296 aa31.67■■■□□ 2.66
RARA-AS1-201ENST00000581080 MORC1Q86VD1 984 aa31.67■■■□□ 2.66
RARA-AS1-201ENST00000581080 BRD4O60885 1362 aaPredicted RBP31.66■■■□□ 2.66
RARA-AS1-201ENST00000581080 PPP2R1AP30153 589 aa31.66■■■□□ 2.66
RARA-AS1-201ENST00000581080 GGNBP2Q9H3C7 697 aa31.65■■■□□ 2.66
RARA-AS1-201ENST00000581080 C1orf167Q5SNV9 1468 aa31.64■■■□□ 2.65
RARA-AS1-201ENST00000581080 MST1RQ04912 1400 aa31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 1636.8 ms