RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 HFM1A2PYH4 1435 aa29.05■■■□□ 2.24
NDEL1-209ENST00000580738 ESCO1Q5FWF5 840 aa29.05■■■□□ 2.24
NDEL1-209ENST00000580738 ZRANB1Q9UGI0 708 aa29.05■■■□□ 2.24
NDEL1-209ENST00000580738 BCL9LQ86UU0 1499 aa29.04■■■□□ 2.24
NDEL1-209ENST00000580738 RPGRIP1LQ68CZ1 1315 aa29.03■■■□□ 2.24
NDEL1-209ENST00000580738 XPCQ01831 940 aaPredicted RBP29.03■■■□□ 2.24
NDEL1-209ENST00000580738 NAIPQ13075 1403 aa29.03■■■□□ 2.24
NDEL1-209ENST00000580738 NPHP3Q7Z494 1330 aa29.02■■■□□ 2.24
NDEL1-209ENST00000580738 FOXO3O43524 673 aa29.01■■■□□ 2.23
NDEL1-209ENST00000580738 PXDNQ92626 1479 aa29■■■□□ 2.23
NDEL1-209ENST00000580738 FOXD1Q16676 465 aa28.97■■■□□ 2.23
NDEL1-209ENST00000580738 GJD4Q96KN9 370 aaPredicted RBP28.97■■■□□ 2.23
NDEL1-209ENST00000580738 CCDC125Q86Z20 511 aa28.96■■■□□ 2.23
NDEL1-209ENST00000580738 CDC42BPGQ6DT37 1551 aa28.96■■■□□ 2.23
NDEL1-209ENST00000580738 NUTM2FA1L443 756 aa28.95■■■□□ 2.22
NDEL1-209ENST00000580738 WAPLQ7Z5K2 1190 aa28.93■■■□□ 2.22
NDEL1-209ENST00000580738 SLC4A1APQ9BWU0 796 aaKnown RBP28.93■■■□□ 2.22
NDEL1-209ENST00000580738 PPLO60437 1756 aa28.93■■■□□ 2.22
NDEL1-209ENST00000580738 STK26Q9P289 416 aa28.92■■■□□ 2.22
NDEL1-209ENST00000580738 ADGRF5Q8IZF2 1346 aa28.91■■■□□ 2.22
NDEL1-209ENST00000580738 MARF1Q9Y4F3 1742 aaKnown RBP28.89■■■□□ 2.22
NDEL1-209ENST00000580738 RRBP1Q9P2E9 1410 aaKnown RBP28.89■■■□□ 2.22
NDEL1-209ENST00000580738 LRPPRCP42704 1394 aaKnown RBP28.88■■■□□ 2.21
NDEL1-209ENST00000580738 UNC5CLQ8IV45 518 aa28.87■■■□□ 2.21
NDEL1-209ENST00000580738 RALGAPBQ86X10 1494 aa28.85■■■□□ 2.21
NDEL1-209ENST00000580738 PLEKHH1Q9ULM0 1364 aa28.85■■■□□ 2.21
NDEL1-209ENST00000580738 SLIT2O94813 1529 aa28.84■■■□□ 2.21
NDEL1-209ENST00000580738 SPATA31A3Q5VYP0 1347 aa28.84■■■□□ 2.21
NDEL1-209ENST00000580738 TECPR2O15040 1411 aa28.84■■■□□ 2.21
NDEL1-209ENST00000580738 GLI3P10071 1580 aa28.84■■■□□ 2.21
NDEL1-209ENST00000580738 RGL3Q3MIN7 710 aa28.83■■■□□ 2.21
NDEL1-209ENST00000580738 TMEM132EQ6IEE7 984 aa28.83■■■□□ 2.21
NDEL1-209ENST00000580738 BLMP54132 1417 aaPredicted RBP28.82■■■□□ 2.2
NDEL1-209ENST00000580738 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.81■■■□□ 2.2
NDEL1-209ENST00000580738 ABCC11Q96J66 1382 aa28.8■■■□□ 2.2
NDEL1-209ENST00000580738 DEFB132Q7Z7B7 95 aa28.8■■■□□ 2.2
NDEL1-209ENST00000580738 KRT28Q7Z3Y7 464 aa28.79■■■□□ 2.2
NDEL1-209ENST00000580738 SEPT12Q8IYM1 358 aa28.76■■■□□ 2.19
NDEL1-209ENST00000580738 CCDC144AA2RUR9 1427 aa28.76■■■□□ 2.19
NDEL1-209ENST00000580738 CABLES1Q8TDN4 633 aa28.75■■■□□ 2.19
NDEL1-209ENST00000580738 SPATA31E1Q6ZUB1 1445 aa28.75■■■□□ 2.19
NDEL1-209ENST00000580738 USP32Q8NFA0 1604 aa28.74■■■□□ 2.19
NDEL1-209ENST00000580738 PLEKHG5O94827 1062 aa28.74■■■□□ 2.19
NDEL1-209ENST00000580738 FMN2Q9NZ56 1722 aa28.74■■■□□ 2.19
NDEL1-209ENST00000580738 ANKRD30BQ9BXX2 1392 aa28.74■■■□□ 2.19
NDEL1-209ENST00000580738 BRWD3Q6RI45 1802 aa28.72■■■□□ 2.19
NDEL1-209ENST00000580738 HAP1P54257 671 aaPredicted RBP28.72■■■□□ 2.19
NDEL1-209ENST00000580738 VPS72Q15906 364 aa28.71■■■□□ 2.19
NDEL1-209ENST00000580738 KIF1AQ12756 1690 aa28.7■■■□□ 2.19
NDEL1-209ENST00000580738 YTHDC2Q9H6S0 1430 aaKnown RBP28.7■■■□□ 2.19
NDEL1-209ENST00000580738 SF3B2Q13435 895 aaKnown RBP28.7■■■□□ 2.18
NDEL1-209ENST00000580738 PIK3C2GO75747 1445 aa28.69■■■□□ 2.18
NDEL1-209ENST00000580738 KNDC1Q76NI1 1749 aa28.69■■■□□ 2.18
NDEL1-209ENST00000580738 PHF8Q9UPP1 1060 aa28.69■■■□□ 2.18
NDEL1-209ENST00000580738 TNS3Q68CZ2 1445 aa28.69■■■□□ 2.18
NDEL1-209ENST00000580738 ONECUT3O60422 494 aaPredicted RBP28.68■■■□□ 2.18
NDEL1-209ENST00000580738 CCDC9Q9Y3X0 531 aaKnown RBP28.68■■■□□ 2.18
NDEL1-209ENST00000580738 PSME1Q06323 249 aa28.67■■■□□ 2.18
NDEL1-209ENST00000580738 IFT172Q9UG01 1749 aa28.66■■■□□ 2.18
NDEL1-209ENST00000580738 LMOD2Q6P5Q4 547 aa28.65■■■□□ 2.18
NDEL1-209ENST00000580738 KRT27Q7Z3Y8 459 aa28.65■■■□□ 2.18
NDEL1-209ENST00000580738 SIRT1Q96EB6 747 aa28.65■■■□□ 2.18
NDEL1-209ENST00000580738 FAM83GA6ND36 823 aa28.62■■■□□ 2.17
NDEL1-209ENST00000580738 MPHOSPH9Q99550 1183 aa28.62■■■□□ 2.17
NDEL1-209ENST00000580738 RGPD8O14715 1765 aaPredicted RBP28.62■■■□□ 2.17
NDEL1-209ENST00000580738 PLCH1Q4KWH8 1693 aa28.61■■■□□ 2.17
NDEL1-209ENST00000580738 C14orf93Q9H972 538 aaKnown RBP28.61■■■□□ 2.17
NDEL1-209ENST00000580738 SBNO1A3KN83 1393 aa28.61■■■□□ 2.17
NDEL1-209ENST00000580738 SAFB2Q14151 953 aaKnown RBP eCLIP28.6■■■□□ 2.17
NDEL1-209ENST00000580738 NRXN1Q9ULB1 1477 aa28.59■■■□□ 2.17
NDEL1-209ENST00000580738 NWD2Q9ULI1 1742 aa28.58■■■□□ 2.17
NDEL1-209ENST00000580738 PSDA5PKW4 1024 aaPredicted RBP28.58■■■□□ 2.17
NDEL1-209ENST00000580738 CFAP70Q5T0N1 1121 aa28.58■■■□□ 2.17
NDEL1-209ENST00000580738 ARHGEF10O15013 1369 aa28.58■■■□□ 2.17
NDEL1-209ENST00000580738 A0A0G2JS52 829 aa28.57■■■□□ 2.16
NDEL1-209ENST00000580738 MYT1Q01538 1121 aa28.57■■■□□ 2.16
NDEL1-209ENST00000580738 PMFBP1Q8TBY8 1022 aa28.57■■■□□ 2.16
NDEL1-209ENST00000580738 PRAM1Q96QH2 718 aa28.57■■■□□ 2.16
NDEL1-209ENST00000580738 ABCA3Q99758 1704 aa28.55■■■□□ 2.16
NDEL1-209ENST00000580738 DHX57Q6P158 1386 aaKnown RBP28.55■■■□□ 2.16
NDEL1-209ENST00000580738 FAM98CQ17RN3 349 aaKnown RBP28.55■■■□□ 2.16
NDEL1-209ENST00000580738 LRP5O75197 1615 aa28.54■■■□□ 2.16
NDEL1-209ENST00000580738 BAG6P46379 1132 aa28.53■■■□□ 2.16
NDEL1-209ENST00000580738 HRCP23327 699 aa28.52■■■□□ 2.16
NDEL1-209ENST00000580738 BTG4Q9NY30 223 aa28.52■■■□□ 2.16
NDEL1-209ENST00000580738 FAM182BQ5T319 152 aa28.49■■■□□ 2.15
NDEL1-209ENST00000580738 POGKQ9P215 609 aa28.48■■■□□ 2.15
NDEL1-209ENST00000580738 EN1Q05925 392 aaPredicted RBP28.47■■■□□ 2.15
NDEL1-209ENST00000580738 NRAPQ86VF7 1730 aa28.46■■■□□ 2.15
NDEL1-209ENST00000580738 ANKARQ7Z5J8 1434 aa28.46■■■□□ 2.15
NDEL1-209ENST00000580738 HIRIP3Q9BW71 556 aaPredicted RBP28.45■■■□□ 2.14
NDEL1-209ENST00000580738 TRPM3Q9HCF6 1732 aaPredicted RBP28.42■■■□□ 2.14
NDEL1-209ENST00000580738 SPATA31A5Q5VU36 1347 aa28.42■■■□□ 2.14
NDEL1-209ENST00000580738 SPATA31A7Q8IWB4 1347 aa28.42■■■□□ 2.14
NDEL1-209ENST00000580738 DLC1Q96QB1 1528 aa28.41■■■□□ 2.14
NDEL1-209ENST00000580738 PRR36Q9H6K5 1346 aa28.41■■■□□ 2.14
NDEL1-209ENST00000580738 GPRASP1Q5JY77 1395 aa28.4■■■□□ 2.14
NDEL1-209ENST00000580738 R3HDM1Q15032 1099 aaKnown RBP28.4■■■□□ 2.14
NDEL1-209ENST00000580738 ACIN1Q9UKV3 1341 aaKnown RBP28.4■■■□□ 2.14
NDEL1-209ENST00000580738 TRAK1Q9UPV9 953 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms