RNA–Protein interactions for RNA: ENST00000580606.5

C19orf47-204, Transcript of chromosome 19 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3

Gene C19orf47, Length 803 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-204ENST00000580606 PIP4K2BP78356 416 aa17.15■□□□□ 0.34
C19orf47-204ENST00000580606 CARD11Q9BXL7 1154 aa17.14■□□□□ 0.33
C19orf47-204ENST00000580606 KNDC1Q76NI1 1749 aa17.13■□□□□ 0.33
C19orf47-204ENST00000580606 SCAF1Q9H7N4 1312 aaKnown RBP17.12■□□□□ 0.33
C19orf47-204ENST00000580606 XIRP1Q702N8 1843 aaKnown RBP17.12■□□□□ 0.33
C19orf47-204ENST00000580606 EIF3AQ14152 1382 aaKnown RBP17.11■□□□□ 0.33
C19orf47-204ENST00000580606 PLEKHH1Q9ULM0 1364 aa17.11■□□□□ 0.33
C19orf47-204ENST00000580606 CENPJQ9HC77 1338 aaPredicted RBP17.1■□□□□ 0.33
C19orf47-204ENST00000580606 SAFB2Q14151 953 aaKnown RBP eCLIP17.09■□□□□ 0.33
C19orf47-204ENST00000580606 RALGAPBQ86X10 1494 aa17.09■□□□□ 0.33
C19orf47-204ENST00000580606 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.09■□□□□ 0.33
C19orf47-204ENST00000580606 WASLO00401 505 aaPredicted RBP17.08■□□□□ 0.32
C19orf47-204ENST00000580606 MST1RQ04912 1400 aa17.07■□□□□ 0.32
C19orf47-204ENST00000580606 TRPM1Q7Z4N2 1603 aa17.07■□□□□ 0.32
C19orf47-204ENST00000580606 MINK1Q8N4C8 1332 aaPredicted RBP17.06■□□□□ 0.32
C19orf47-204ENST00000580606 BRINP3Q76B58 766 aa17.06■□□□□ 0.32
C19orf47-204ENST00000580606 C1orf167Q5SNV9 1468 aa17.05■□□□□ 0.32
C19orf47-204ENST00000580606 CDC42BPGQ6DT37 1551 aa17.05■□□□□ 0.32
C19orf47-204ENST00000580606 ESCO1Q5FWF5 840 aa17.04■□□□□ 0.32
C19orf47-204ENST00000580606 HSPA1LP34931 641 aa17.03■□□□□ 0.32
C19orf47-204ENST00000580606 HIRIP3Q9BW71 556 aaPredicted RBP17.03■□□□□ 0.32
C19orf47-204ENST00000580606 CDK19Q9BWU1 502 aa17.03■□□□□ 0.32
C19orf47-204ENST00000580606 ANKARQ7Z5J8 1434 aa17.03■□□□□ 0.32
C19orf47-204ENST00000580606 EVC2Q86UK5 1308 aa17.02■□□□□ 0.32
C19orf47-204ENST00000580606 PUS7Q96PZ0 661 aaKnown RBP17.02■□□□□ 0.32
C19orf47-204ENST00000580606 SBNO2Q9Y2G9 1366 aa17.02■□□□□ 0.31
C19orf47-204ENST00000580606 ORAI2Q96SN7 254 aa17.01■□□□□ 0.31
C19orf47-204ENST00000580606 CCDC61Q9Y6R9 512 aa17.01■□□□□ 0.31
C19orf47-204ENST00000580606 NALCNQ8IZF0 1738 aa17.01■□□□□ 0.31
C19orf47-204ENST00000580606 ADGRB2O60241 1585 aa17■□□□□ 0.31
C19orf47-204ENST00000580606 NPHP3Q7Z494 1330 aa16.99■□□□□ 0.31
C19orf47-204ENST00000580606 LRRC59Q96AG4 307 aaKnown RBP16.99■□□□□ 0.31
C19orf47-204ENST00000580606 NUDT16Q96DE0 195 aaKnown RBP16.99■□□□□ 0.31
C19orf47-204ENST00000580606 PHF8Q9UPP1 1060 aa16.99■□□□□ 0.31
C19orf47-204ENST00000580606 NUTM2FA1L443 756 aa16.98■□□□□ 0.31
C19orf47-204ENST00000580606 ARHGEF28Q8N1W1 1705 aaKnown RBP16.98■□□□□ 0.31
C19orf47-204ENST00000580606 ST20-MTHFSA0A0A6YYL1 179 aa16.97■□□□□ 0.31
C19orf47-204ENST00000580606 SRPK2P78362 688 aaKnown RBP16.97■□□□□ 0.31
C19orf47-204ENST00000580606 PSME1Q06323 249 aa16.97■□□□□ 0.31
C19orf47-204ENST00000580606 PLEKHG3A1L390 1219 aa16.96■□□□□ 0.31
C19orf47-204ENST00000580606 FOXO3O43524 673 aa16.96■□□□□ 0.31
C19orf47-204ENST00000580606 ROBO1Q9Y6N7 1651 aa16.96■□□□□ 0.31
C19orf47-204ENST00000580606 SOS2Q07890 1332 aaPredicted RBP16.96■□□□□ 0.3
C19orf47-204ENST00000580606 EIF4G2P78344 907 aaKnown RBP eCLIP16.95■□□□□ 0.3
C19orf47-204ENST00000580606 CDCA8Q53HL2 280 aa16.95■□□□□ 0.3
C19orf47-204ENST00000580606 USP47Q96K76 1375 aa16.94■□□□□ 0.3
C19orf47-204ENST00000580606 TESK2Q96S53 571 aa16.94■□□□□ 0.3
C19orf47-204ENST00000580606 TULP4Q9NRJ4 1543 aa16.94■□□□□ 0.3
C19orf47-204ENST00000580606 AHDC1Q5TGY3 1603 aaPredicted RBP16.93■□□□□ 0.3
C19orf47-204ENST00000580606 PRR36Q9H6K5 1346 aa16.93■□□□□ 0.3
C19orf47-204ENST00000580606 FMN2Q9NZ56 1722 aa16.93■□□□□ 0.3
C19orf47-204ENST00000580606 JCADQ9P266 1359 aa16.92■□□□□ 0.3
C19orf47-204ENST00000580606 TMF1P82094 1093 aa16.92■□□□□ 0.3
C19orf47-204ENST00000580606 NGDNQ8NEJ9 315 aaKnown RBP16.92■□□□□ 0.3
C19orf47-204ENST00000580606 CABP2Q9NPB3 220 aa16.92■□□□□ 0.3
C19orf47-204ENST00000580606 ATAD2Q6PL18 1390 aa16.91■□□□□ 0.3
C19orf47-204ENST00000580606 KRT28Q7Z3Y7 464 aa16.91■□□□□ 0.3
C19orf47-204ENST00000580606 ZNF692Q9BU19 519 aaPredicted RBP16.91■□□□□ 0.3
C19orf47-204ENST00000580606 ZEB1P37275 1124 aaPredicted RBP16.89■□□□□ 0.29
C19orf47-204ENST00000580606 PMFBP1Q8TBY8 1022 aa16.89■□□□□ 0.29
C19orf47-204ENST00000580606 SPATA31A6Q5VVP1 1343 aa16.89■□□□□ 0.29
C19orf47-204ENST00000580606 BRD4O60885 1362 aaPredicted RBP16.89■□□□□ 0.29
C19orf47-204ENST00000580606 CABP1Q9NZU7 370 aa16.88■□□□□ 0.29
C19orf47-204ENST00000580606 SBNO1A3KN83 1393 aa16.88■□□□□ 0.29
C19orf47-204ENST00000580606 POLR3AO14802 1390 aaPredicted RBP16.88■□□□□ 0.29
C19orf47-204ENST00000580606 ATP7BP35670 1465 aa16.87■□□□□ 0.29
C19orf47-204ENST00000580606 DDX17Q92841 729 aaKnown RBP16.87■□□□□ 0.29
C19orf47-204ENST00000580606 ACEP12821 1306 aa16.87■□□□□ 0.29
C19orf47-204ENST00000580606 QRICH2Q9H0J4 1663 aa16.87■□□□□ 0.29
C19orf47-204ENST00000580606 KIF1AQ12756 1690 aa16.86■□□□□ 0.29
C19orf47-204ENST00000580606 SPATA31A3Q5VYP0 1347 aa16.85■□□□□ 0.29
C19orf47-204ENST00000580606 NINLQ9Y2I6 1382 aa16.85■□□□□ 0.29
C19orf47-204ENST00000580606 PPIP5K1Q6PFW1 1433 aa16.85■□□□□ 0.29
C19orf47-204ENST00000580606 NHSL1Q5SYE7 1610 aa16.85■□□□□ 0.29
C19orf47-204ENST00000580606 PHLPP1O60346 1717 aa16.84■□□□□ 0.29
C19orf47-204ENST00000580606 HSPA5P11021 654 aaKnown RBP16.84■□□□□ 0.29
C19orf47-204ENST00000580606 COL16A1Q07092 1604 aaPredicted RBP16.83■□□□□ 0.28
C19orf47-204ENST00000580606 USP32Q8NFA0 1604 aa16.83■□□□□ 0.28
C19orf47-204ENST00000580606 PXDNQ92626 1479 aa16.83■□□□□ 0.28
C19orf47-204ENST00000580606 TERF2IPQ9NYB0 399 aa16.83■□□□□ 0.28
C19orf47-204ENST00000580606 ARHGEF10O15013 1369 aa16.82■□□□□ 0.28
C19orf47-204ENST00000580606 XPCQ01831 940 aaPredicted RBP16.81■□□□□ 0.28
C19orf47-204ENST00000580606 HDGFL2Q7Z4V5 671 aaPredicted RBP16.81■□□□□ 0.28
C19orf47-204ENST00000580606 PNPLA6Q8IY17 1366 aa16.8■□□□□ 0.28
C19orf47-204ENST00000580606 TMC1Q8TDI8 760 aa16.8■□□□□ 0.28
C19orf47-204ENST00000580606 PAK3O75914 559 aaPredicted RBP16.79■□□□□ 0.28
C19orf47-204ENST00000580606 ITSN1Q15811 1721 aa16.79■□□□□ 0.28
C19orf47-204ENST00000580606 SLC12A5Q9H2X9 1139 aa16.78■□□□□ 0.28
C19orf47-204ENST00000580606 CPSF1Q10570 1443 aaKnown RBP16.78■□□□□ 0.28
C19orf47-204ENST00000580606 TNS3Q68CZ2 1445 aa16.78■□□□□ 0.28
C19orf47-204ENST00000580606 RGPD8O14715 1765 aaPredicted RBP16.77■□□□□ 0.28
C19orf47-204ENST00000580606 LMOD2Q6P5Q4 547 aa16.77■□□□□ 0.28
C19orf47-204ENST00000580606 TTC21AQ8NDW8 1320 aa16.76■□□□□ 0.27
C19orf47-204ENST00000580606 ABTB2Q8N961 1025 aa16.76■□□□□ 0.27
C19orf47-204ENST00000580606 DISP3Q9P2K9 1392 aa16.76■□□□□ 0.27
C19orf47-204ENST00000580606 NLRP13Q86W25 1043 aa16.75■□□□□ 0.27
C19orf47-204ENST00000580606 KTN1Q86UP2 1357 aaKnown RBP16.75■□□□□ 0.27
C19orf47-204ENST00000580606 USP6P35125 1406 aa16.74■□□□□ 0.27
C19orf47-204ENST00000580606 SHPRHQ149N8 1683 aa16.74■□□□□ 0.27
C19orf47-204ENST00000580606 TOPAZ1Q8N9V7 1692 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms