RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 ADGRL3Q9HAR2 1447 aa16.42■□□□□ 0.22
SNORD3C-201ENST00000580533 EVC2Q86UK5 1308 aa16.42■□□□□ 0.22
SNORD3C-201ENST00000580533 LRRC7Q96NW7 1537 aa16.41■□□□□ 0.22
SNORD3C-201ENST00000580533 SAFB2Q14151 953 aaKnown RBP eCLIP16.41■□□□□ 0.22
SNORD3C-201ENST00000580533 C19orf44Q9H6X5 657 aa16.41■□□□□ 0.22
SNORD3C-201ENST00000580533 ADGRB2O60241 1585 aa16.4■□□□□ 0.22
SNORD3C-201ENST00000580533 DCCP43146 1447 aa16.4■□□□□ 0.22
SNORD3C-201ENST00000580533 PHF23Q9BUL5 403 aaPredicted RBP16.4■□□□□ 0.22
SNORD3C-201ENST00000580533 STRCP1A6NGW2 1772 aa16.4■□□□□ 0.22
SNORD3C-201ENST00000580533 LTBP4Q8N2S1 1624 aa16.39■□□□□ 0.21
SNORD3C-201ENST00000580533 IQSEC2Q5JU85 1478 aa16.39■□□□□ 0.21
SNORD3C-201ENST00000580533 MINK1Q8N4C8 1332 aaPredicted RBP16.39■□□□□ 0.21
SNORD3C-201ENST00000580533 PLEKHH1Q9ULM0 1364 aa16.38■□□□□ 0.21
SNORD3C-201ENST00000580533 ATF3P18847 181 aa16.38■□□□□ 0.21
SNORD3C-201ENST00000580533 CADPS2Q86UW7 1296 aa16.38■□□□□ 0.21
SNORD3C-201ENST00000580533 CDC42BPGQ6DT37 1551 aa16.38■□□□□ 0.21
SNORD3C-201ENST00000580533 PUS7Q96PZ0 661 aaKnown RBP16.37■□□□□ 0.21
SNORD3C-201ENST00000580533 WASLO00401 505 aaPredicted RBP16.36■□□□□ 0.21
SNORD3C-201ENST00000580533 TESK2Q96S53 571 aa16.36■□□□□ 0.21
SNORD3C-201ENST00000580533 SRPK2P78362 688 aaKnown RBP16.35■□□□□ 0.21
SNORD3C-201ENST00000580533 ATAD2Q6PL18 1390 aa16.35■□□□□ 0.21
SNORD3C-201ENST00000580533 NALCNQ8IZF0 1738 aa16.34■□□□□ 0.21
SNORD3C-201ENST00000580533 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.34■□□□□ 0.21
SNORD3C-201ENST00000580533 HIRIP3Q9BW71 556 aaPredicted RBP16.34■□□□□ 0.21
SNORD3C-201ENST00000580533 ANKARQ7Z5J8 1434 aa16.33■□□□□ 0.2
SNORD3C-201ENST00000580533 CDK19Q9BWU1 502 aa16.32■□□□□ 0.2
SNORD3C-201ENST00000580533 TULP4Q9NRJ4 1543 aa16.32■□□□□ 0.2
SNORD3C-201ENST00000580533 NINLQ9Y2I6 1382 aa16.32■□□□□ 0.2
SNORD3C-201ENST00000580533 RBM33Q96EV2 1170 aaKnown RBP16.31■□□□□ 0.2
SNORD3C-201ENST00000580533 FMN2Q9NZ56 1722 aa16.29■□□□□ 0.2
SNORD3C-201ENST00000580533 TOM1O60784 492 aa16.29■□□□□ 0.2
SNORD3C-201ENST00000580533 CERKQ8TCT0 537 aa16.29■□□□□ 0.2
SNORD3C-201ENST00000580533 XIRP1Q702N8 1843 aaKnown RBP16.29■□□□□ 0.2
SNORD3C-201ENST00000580533 DISP3Q9P2K9 1392 aa16.28■□□□□ 0.2
SNORD3C-201ENST00000580533 ZNF316A6NFI3 1004 aaPredicted RBP16.28■□□□□ 0.2
SNORD3C-201ENST00000580533 CCDC61Q9Y6R9 512 aa16.28■□□□□ 0.2
SNORD3C-201ENST00000580533 NUDT16Q96DE0 195 aaKnown RBP16.27■□□□□ 0.2
SNORD3C-201ENST00000580533 POLR3GLQ9BT43 218 aa16.27■□□□□ 0.2
SNORD3C-201ENST00000580533 CABP2Q9NPB3 220 aa16.27■□□□□ 0.2
SNORD3C-201ENST00000580533 ITSN1Q15811 1721 aa16.27■□□□□ 0.19
SNORD3C-201ENST00000580533 ATP7BP35670 1465 aa16.25■□□□□ 0.19
SNORD3C-201ENST00000580533 SLAIN2Q9P270 581 aa16.25■□□□□ 0.19
SNORD3C-201ENST00000580533 MST1RQ04912 1400 aa16.25■□□□□ 0.19
SNORD3C-201ENST00000580533 CCDC7Q96M83 1385 aa16.25■□□□□ 0.19
SNORD3C-201ENST00000580533 KIF7Q2M1P5 1343 aa16.24■□□□□ 0.19
SNORD3C-201ENST00000580533 C1orf167Q5SNV9 1468 aa16.24■□□□□ 0.19
SNORD3C-201ENST00000580533 TMC1Q8TDI8 760 aa16.24■□□□□ 0.19
SNORD3C-201ENST00000580533 TERF2IPQ9NYB0 399 aa16.24■□□□□ 0.19
SNORD3C-201ENST00000580533 PPIP5K1Q6PFW1 1433 aa16.23■□□□□ 0.19
SNORD3C-201ENST00000580533 ESCO1Q5FWF5 840 aa16.23■□□□□ 0.19
SNORD3C-201ENST00000580533 KIF1AQ12756 1690 aa16.23■□□□□ 0.19
SNORD3C-201ENST00000580533 HDGFL2Q7Z4V5 671 aaPredicted RBP16.22■□□□□ 0.19
SNORD3C-201ENST00000580533 NUTM2FA1L443 756 aa16.21■□□□□ 0.19
SNORD3C-201ENST00000580533 UBAP1LF5GYI3 381 aa16.21■□□□□ 0.19
SNORD3C-201ENST00000580533 PHF8Q9UPP1 1060 aa16.21■□□□□ 0.19
SNORD3C-201ENST00000580533 TOPAZ1Q8N9V7 1692 aa16.21■□□□□ 0.18
SNORD3C-201ENST00000580533 WASHC2AQ641Q2 1341 aa16.2■□□□□ 0.18
SNORD3C-201ENST00000580533 PLEKHG3A1L390 1219 aa16.2■□□□□ 0.18
SNORD3C-201ENST00000580533 NGDNQ8NEJ9 315 aaKnown RBP16.2■□□□□ 0.18
SNORD3C-201ENST00000580533 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
SNORD3C-201ENST00000580533 PRR36Q9H6K5 1346 aa16.19■□□□□ 0.18
SNORD3C-201ENST00000580533 BRD4O60885 1362 aaPredicted RBP16.19■□□□□ 0.18
SNORD3C-201ENST00000580533 CABP1Q9NZU7 370 aa16.19■□□□□ 0.18
SNORD3C-201ENST00000580533 USP32Q8NFA0 1604 aa16.19■□□□□ 0.18
SNORD3C-201ENST00000580533 ANKRD36BQ8N2N9 1353 aa16.18■□□□□ 0.18
SNORD3C-201ENST00000580533 NPHP3Q7Z494 1330 aa16.18■□□□□ 0.18
SNORD3C-201ENST00000580533 C11orf95C9JLR9 678 aaPredicted RBP16.17■□□□□ 0.18
SNORD3C-201ENST00000580533 POLR3AO14802 1390 aaPredicted RBP16.16■□□□□ 0.18
SNORD3C-201ENST00000580533 PSME1Q06323 249 aa16.16■□□□□ 0.18
SNORD3C-201ENST00000580533 BRINP3Q76B58 766 aa16.15■□□□□ 0.18
SNORD3C-201ENST00000580533 SLC12A5Q9H2X9 1139 aa16.15■□□□□ 0.18
SNORD3C-201ENST00000580533 ACEP12821 1306 aa16.15■□□□□ 0.18
SNORD3C-201ENST00000580533 SCAF1Q9H7N4 1312 aaKnown RBP16.15■□□□□ 0.18
SNORD3C-201ENST00000580533 PMFBP1Q8TBY8 1022 aa16.14■□□□□ 0.17
SNORD3C-201ENST00000580533 ORAI2Q96SN7 254 aa16.14■□□□□ 0.17
SNORD3C-201ENST00000580533 MYOM1P52179 1685 aa16.14■□□□□ 0.17
SNORD3C-201ENST00000580533 KTN1Q86UP2 1357 aaKnown RBP16.13■□□□□ 0.17
SNORD3C-201ENST00000580533 PIP4K2BP78356 416 aa16.13■□□□□ 0.17
SNORD3C-201ENST00000580533 RGPD8O14715 1765 aaPredicted RBP16.13■□□□□ 0.17
SNORD3C-201ENST00000580533 CPSF1Q10570 1443 aaKnown RBP16.12■□□□□ 0.17
SNORD3C-201ENST00000580533 ROBO1Q9Y6N7 1651 aa16.12■□□□□ 0.17
SNORD3C-201ENST00000580533 A0A1W2PP64 1363 aa16.12■□□□□ 0.17
SNORD3C-201ENST00000580533 EDC4Q6P2E9 1401 aaKnown RBP16.11■□□□□ 0.17
SNORD3C-201ENST00000580533 PANK3Q9H999 370 aa16.11■□□□□ 0.17
SNORD3C-201ENST00000580533 KNSTRNQ9Y448 316 aa16.11■□□□□ 0.17
SNORD3C-201ENST00000580533 USP6P35125 1406 aa16.11■□□□□ 0.17
SNORD3C-201ENST00000580533 FOXO3O43524 673 aa16.1■□□□□ 0.17
SNORD3C-201ENST00000580533 TTC21AQ8NDW8 1320 aa16.1■□□□□ 0.17
SNORD3C-201ENST00000580533 AHDC1Q5TGY3 1603 aaPredicted RBP16.09■□□□□ 0.17
SNORD3C-201ENST00000580533 AKAP12Q02952 1782 aa16.09■□□□□ 0.17
SNORD3C-201ENST00000580533 KRT28Q7Z3Y7 464 aa16.09■□□□□ 0.17
SNORD3C-201ENST00000580533 CGNL1Q0VF96 1302 aa16.09■□□□□ 0.17
SNORD3C-201ENST00000580533 SBNO1A3KN83 1393 aa16.09■□□□□ 0.17
SNORD3C-201ENST00000580533 DDX10Q13206 875 aaKnown RBP16.08■□□□□ 0.16
SNORD3C-201ENST00000580533 CD163L1Q9NR16 1453 aa16.08■□□□□ 0.16
SNORD3C-201ENST00000580533 NHSL1Q5SYE7 1610 aa16.08■□□□□ 0.16
SNORD3C-201ENST00000580533 MON2Q7Z3U7 1717 aa16.08■□□□□ 0.16
SNORD3C-201ENST00000580533 PAK3O75914 559 aaPredicted RBP16.07■□□□□ 0.16
SNORD3C-201ENST00000580533 NSD2O96028 1365 aa16.07■□□□□ 0.16
SNORD3C-201ENST00000580533 NSD3Q9BZ95 1437 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms