RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 BRD4O60885 1362 aaPredicted RBP20.17■□□□□ 0.82
CDK5RAP3-218ENST00000580391 SETD1BQ9UPS6 1966 aaKnown RBP20.17■□□□□ 0.82
CDK5RAP3-218ENST00000580391 TECPR2O15040 1411 aa20.17■□□□□ 0.82
CDK5RAP3-218ENST00000580391 CABP2Q9NPB3 220 aa20.17■□□□□ 0.82
CDK5RAP3-218ENST00000580391 MED14O60244 1454 aa20.17■□□□□ 0.82
CDK5RAP3-218ENST00000580391 TMC1Q8TDI8 760 aa20.15■□□□□ 0.82
CDK5RAP3-218ENST00000580391 USP32Q8NFA0 1604 aa20.15■□□□□ 0.82
CDK5RAP3-218ENST00000580391 HNRNPUQ00839 825 aaKnown RBP eCLIP20.15■□□□□ 0.82
CDK5RAP3-218ENST00000580391 WAPLQ7Z5K2 1190 aa20.15■□□□□ 0.82
CDK5RAP3-218ENST00000580391 PUS7Q96PZ0 661 aaKnown RBP20.15■□□□□ 0.82
CDK5RAP3-218ENST00000580391 CARD14Q9BXL6 1004 aa20.15■□□□□ 0.82
CDK5RAP3-218ENST00000580391 SLC12A5Q9H2X9 1139 aa20.15■□□□□ 0.82
CDK5RAP3-218ENST00000580391 EID1Q9Y6B2 187 aa20.15■□□□□ 0.82
CDK5RAP3-218ENST00000580391 SCAF1Q9H7N4 1312 aaKnown RBP20.15■□□□□ 0.82
CDK5RAP3-218ENST00000580391 THEMISQ8N1K5 641 aaPredicted RBP20.14■□□□□ 0.81
CDK5RAP3-218ENST00000580391 NPC1L1Q9UHC9 1359 aa20.14■□□□□ 0.81
CDK5RAP3-218ENST00000580391 NSD3Q9BZ95 1437 aa20.14■□□□□ 0.81
CDK5RAP3-218ENST00000580391 NLRP13Q86W25 1043 aa20.14■□□□□ 0.81
CDK5RAP3-218ENST00000580391 DIP2AQ14689 1571 aa20.13■□□□□ 0.81
CDK5RAP3-218ENST00000580391 SRPK2P78362 688 aaKnown RBP20.12■□□□□ 0.81
CDK5RAP3-218ENST00000580391 FAM135BQ49AJ0 1406 aa20.11■□□□□ 0.81
CDK5RAP3-218ENST00000580391 SLC26A8Q96RN1 970 aa20.1■□□□□ 0.81
CDK5RAP3-218ENST00000580391 ATAD2Q6PL18 1390 aa20.1■□□□□ 0.81
CDK5RAP3-218ENST00000580391 PTPRUQ92729 1446 aa20.1■□□□□ 0.81
CDK5RAP3-218ENST00000580391 PNISRQ8TF01 805 aaKnown RBP20.1■□□□□ 0.81
CDK5RAP3-218ENST00000580391 ANKRD36BQ8N2N9 1353 aa20.1■□□□□ 0.81
CDK5RAP3-218ENST00000580391 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.08■□□□□ 0.81
CDK5RAP3-218ENST00000580391 ROBO2Q9HCK4 1378 aa20.08■□□□□ 0.81
CDK5RAP3-218ENST00000580391 NINLQ9Y2I6 1382 aa20.08■□□□□ 0.8
CDK5RAP3-218ENST00000580391 XRN1Q8IZH2 1706 aaKnown RBP20.07■□□□□ 0.8
CDK5RAP3-218ENST00000580391 CDK19Q9BWU1 502 aa20.07■□□□□ 0.8
CDK5RAP3-218ENST00000580391 GTF3C3Q9Y5Q9 886 aa20.07■□□□□ 0.8
CDK5RAP3-218ENST00000580391 A0A1W2PP64 1363 aa20.07■□□□□ 0.8
CDK5RAP3-218ENST00000580391 ADGRB2O60241 1585 aa20.06■□□□□ 0.8
CDK5RAP3-218ENST00000580391 CD163L1Q9NR16 1453 aa20.06■□□□□ 0.8
CDK5RAP3-218ENST00000580391 PPP2R1AP30153 589 aa20.05■□□□□ 0.8
CDK5RAP3-218ENST00000580391 SIRT1Q96EB6 747 aa20.04■□□□□ 0.8
CDK5RAP3-218ENST00000580391 ANKRD26Q9UPS8 1709 aa20.04■□□□□ 0.8
CDK5RAP3-218ENST00000580391 TBX22Q9Y458 520 aa20.03■□□□□ 0.8
CDK5RAP3-218ENST00000580391 KIF20BQ96Q89 1820 aa20.03■□□□□ 0.8
CDK5RAP3-218ENST00000580391 PTCH1Q13635 1447 aa20.01■□□□□ 0.79
CDK5RAP3-218ENST00000580391 WASLO00401 505 aaPredicted RBP20.01■□□□□ 0.79
CDK5RAP3-218ENST00000580391 CHD2O14647 1828 aaKnown RBP20■□□□□ 0.79
CDK5RAP3-218ENST00000580391 ZBED9Q6R2W3 1325 aa20■□□□□ 0.79
CDK5RAP3-218ENST00000580391 TOPAZ1Q8N9V7 1692 aa20■□□□□ 0.79
CDK5RAP3-218ENST00000580391 ATP7BP35670 1465 aa19.99■□□□□ 0.79
CDK5RAP3-218ENST00000580391 ITSN1Q15811 1721 aa19.99■□□□□ 0.79
CDK5RAP3-218ENST00000580391 CGNL1Q0VF96 1302 aa19.99■□□□□ 0.79
CDK5RAP3-218ENST00000580391 AMOTL2Q9Y2J4 779 aa19.99■□□□□ 0.79
CDK5RAP3-218ENST00000580391 AKAP12Q02952 1782 aa19.98■□□□□ 0.79
CDK5RAP3-218ENST00000580391 MON2Q7Z3U7 1717 aa19.97■□□□□ 0.79
CDK5RAP3-218ENST00000580391 ANKLE2Q86XL3 938 aa19.97■□□□□ 0.79
CDK5RAP3-218ENST00000580391 CABP1Q9NZU7 370 aa19.97■□□□□ 0.79
CDK5RAP3-218ENST00000580391 CDC42BPGQ6DT37 1551 aa19.96■□□□□ 0.79
CDK5RAP3-218ENST00000580391 PPIP5K1Q6PFW1 1433 aa19.96■□□□□ 0.79
CDK5RAP3-218ENST00000580391 TERF2IPQ9NYB0 399 aa19.96■□□□□ 0.79
CDK5RAP3-218ENST00000580391 NSD2O96028 1365 aa19.96■□□□□ 0.79
CDK5RAP3-218ENST00000580391 PIK3R4Q99570 1358 aa19.95■□□□□ 0.78
CDK5RAP3-218ENST00000580391 SENP3-EIF4A1A0A087X0R7 540 aa19.94■□□□□ 0.78
CDK5RAP3-218ENST00000580391 MORC1Q86VD1 984 aa19.94■□□□□ 0.78
CDK5RAP3-218ENST00000580391 BLMP54132 1417 aaPredicted RBP19.94■□□□□ 0.78
CDK5RAP3-218ENST00000580391 HDGFL2Q7Z4V5 671 aaPredicted RBP19.94■□□□□ 0.78
CDK5RAP3-218ENST00000580391 PRR36Q9H6K5 1346 aa19.93■□□□□ 0.78
CDK5RAP3-218ENST00000580391 SHPRHQ149N8 1683 aa19.93■□□□□ 0.78
CDK5RAP3-218ENST00000580391 RGPD8O14715 1765 aaPredicted RBP19.93■□□□□ 0.78
CDK5RAP3-218ENST00000580391 NUDT16Q96DE0 195 aaKnown RBP19.92■□□□□ 0.78
CDK5RAP3-218ENST00000580391 NPHP4O75161 1426 aaPredicted RBP19.92■□□□□ 0.78
CDK5RAP3-218ENST00000580391 NCKAP5LQ9HCH0 1330 aa19.92■□□□□ 0.78
CDK5RAP3-218ENST00000580391 NALCNQ8IZF0 1738 aa19.91■□□□□ 0.78
CDK5RAP3-218ENST00000580391 CPSF1Q10570 1443 aaKnown RBP19.91■□□□□ 0.78
CDK5RAP3-218ENST00000580391 TNNT2P45379 298 aaPredicted RBP19.91■□□□□ 0.78
CDK5RAP3-218ENST00000580391 KCNA6P17658 529 aa19.9■□□□□ 0.78
CDK5RAP3-218ENST00000580391 INSRP06213 1382 aa19.9■□□□□ 0.78
CDK5RAP3-218ENST00000580391 NRKQ7Z2Y5 1582 aa19.89■□□□□ 0.77
CDK5RAP3-218ENST00000580391 GGNBP2Q9H3C7 697 aa19.88■□□□□ 0.77
CDK5RAP3-218ENST00000580391 NKTRP30414 1462 aaKnown RBP19.88■□□□□ 0.77
CDK5RAP3-218ENST00000580391 FMN2Q9NZ56 1722 aa19.87■□□□□ 0.77
CDK5RAP3-218ENST00000580391 CCDC61Q9Y6R9 512 aa19.87■□□□□ 0.77
CDK5RAP3-218ENST00000580391 POLR3AO14802 1390 aaPredicted RBP19.87■□□□□ 0.77
CDK5RAP3-218ENST00000580391 FYB1O15117 783 aa19.86■□□□□ 0.77
CDK5RAP3-218ENST00000580391 WDR43Q15061 677 aaKnown RBP eCLIP19.86■□□□□ 0.77
CDK5RAP3-218ENST00000580391 EDC4Q6P2E9 1401 aaKnown RBP19.86■□□□□ 0.77
CDK5RAP3-218ENST00000580391 ADAMTS8Q9UP79 889 aa19.86■□□□□ 0.77
CDK5RAP3-218ENST00000580391 NUTM2FA1L443 756 aa19.85■□□□□ 0.77
CDK5RAP3-218ENST00000580391 NWD1Q149M9 1564 aa19.84■□□□□ 0.77
CDK5RAP3-218ENST00000580391 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.83■□□□□ 0.77
CDK5RAP3-218ENST00000580391 MAP2P11137 1827 aaKnown RBP19.81■□□□□ 0.76
CDK5RAP3-218ENST00000580391 MTHFSP49914 203 aa19.81■□□□□ 0.76
CDK5RAP3-218ENST00000580391 SALL2Q9Y467 1007 aaPredicted RBP19.8■□□□□ 0.76
CDK5RAP3-218ENST00000580391 SMG6Q86US8 1419 aaKnown RBP19.78■□□□□ 0.76
CDK5RAP3-218ENST00000580391 COL3A1P02461 1466 aaPredicted RBP19.78■□□□□ 0.76
CDK5RAP3-218ENST00000580391 KDM4FA0A1W2PPD8 638 aa19.77■□□□□ 0.76
CDK5RAP3-218ENST00000580391 NME9Q86XW9 330 aa19.77■□□□□ 0.76
CDK5RAP3-218ENST00000580391 ACEP12821 1306 aa19.77■□□□□ 0.76
CDK5RAP3-218ENST00000580391 ANKARQ7Z5J8 1434 aa19.77■□□□□ 0.76
CDK5RAP3-218ENST00000580391 PLEKHG3A1L390 1219 aa19.77■□□□□ 0.75
CDK5RAP3-218ENST00000580391 USP6P35125 1406 aa19.77■□□□□ 0.75
CDK5RAP3-218ENST00000580391 RBM33Q96EV2 1170 aaKnown RBP19.76■□□□□ 0.75
CDK5RAP3-218ENST00000580391 ADGRL3Q9HAR2 1447 aa19.75■□□□□ 0.75
CDK5RAP3-218ENST00000580391 STRCP1A6NGW2 1772 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms