RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 TSPOAP1O95153 1857 aa11.92□□□□□ -0.5
PPP4R1-213ENST00000579609 CLTCQ00610 1675 aaKnown RBP11.92□□□□□ -0.5
PPP4R1-213ENST00000579609 VASPP50552 380 aaPredicted RBP11.92□□□□□ -0.5
PPP4R1-213ENST00000579609 PANK3Q9H999 370 aa11.92□□□□□ -0.5
PPP4R1-213ENST00000579609 CFAP65Q6ZU64 1925 aaKnown RBP11.92□□□□□ -0.5
PPP4R1-213ENST00000579609 NGEFQ8N5V2 710 aa11.91□□□□□ -0.5
PPP4R1-213ENST00000579609 KNSTRNQ9Y448 316 aa11.91□□□□□ -0.5
PPP4R1-213ENST00000579609 DLC1Q96QB1 1528 aa11.91□□□□□ -0.5
PPP4R1-213ENST00000579609 MYO5BQ9ULV0 1848 aa11.9□□□□□ -0.5
PPP4R1-213ENST00000579609 RNF123Q5XPI4 1314 aa11.9□□□□□ -0.5
PPP4R1-213ENST00000579609 CFAP70Q5T0N1 1121 aa11.9□□□□□ -0.5
PPP4R1-213ENST00000579609 NUDCQ9Y266 331 aa11.9□□□□□ -0.5
PPP4R1-213ENST00000579609 NSD2O96028 1365 aa11.89□□□□□ -0.51
PPP4R1-213ENST00000579609 SETD1AO15047 1707 aaKnown RBP11.86□□□□□ -0.51
PPP4R1-213ENST00000579609 KNDC1Q76NI1 1749 aa11.85□□□□□ -0.51
PPP4R1-213ENST00000579609 MED14O60244 1454 aa11.84□□□□□ -0.51
PPP4R1-213ENST00000579609 ANKRD26Q9UPS8 1709 aa11.84□□□□□ -0.51
PPP4R1-213ENST00000579609 CACNB1Q02641 598 aaPredicted RBP11.84□□□□□ -0.51
PPP4R1-213ENST00000579609 IDI1Q13907 227 aa11.84□□□□□ -0.51
PPP4R1-213ENST00000579609 ZNF692Q9BU19 519 aaPredicted RBP11.84□□□□□ -0.51
PPP4R1-213ENST00000579609 ALKQ9UM73 1620 aa11.84□□□□□ -0.51
PPP4R1-213ENST00000579609 EVC2Q86UK5 1308 aa11.84□□□□□ -0.51
PPP4R1-213ENST00000579609 POLR3AO14802 1390 aaPredicted RBP11.83□□□□□ -0.52
PPP4R1-213ENST00000579609 TULP4Q9NRJ4 1543 aa11.83□□□□□ -0.52
PPP4R1-213ENST00000579609 PPP4R2Q9NY27 417 aa11.83□□□□□ -0.52
PPP4R1-213ENST00000579609 A2ML1A8K2U0 1454 aa11.83□□□□□ -0.52
PPP4R1-213ENST00000579609 PTPRMP28827 1452 aa11.83□□□□□ -0.52
PPP4R1-213ENST00000579609 ATAD2Q6PL18 1390 aa11.82□□□□□ -0.52
PPP4R1-213ENST00000579609 CHGAP10645 457 aaKnown RBP11.82□□□□□ -0.52
PPP4R1-213ENST00000579609 PPP2R1AP30153 589 aa11.82□□□□□ -0.52
PPP4R1-213ENST00000579609 ANKRD36BQ8N2N9 1353 aa11.81□□□□□ -0.52
PPP4R1-213ENST00000579609 IFNLR1Q8IU57 520 aaPredicted RBP11.81□□□□□ -0.52
PPP4R1-213ENST00000579609 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.81□□□□□ -0.52
PPP4R1-213ENST00000579609 YTHDC2Q9H6S0 1430 aaKnown RBP11.8□□□□□ -0.52
PPP4R1-213ENST00000579609 SPDYE2BA6NHP3 402 aa11.8□□□□□ -0.52
PPP4R1-213ENST00000579609 SPDYE6P0CI01 402 aa11.8□□□□□ -0.52
PPP4R1-213ENST00000579609 HDGFP51858 240 aaKnown RBP11.8□□□□□ -0.52
PPP4R1-213ENST00000579609 SPDYE2Q495Y8 402 aa11.8□□□□□ -0.52
PPP4R1-213ENST00000579609 CC2D1BQ5T0F9 858 aaKnown RBP11.79□□□□□ -0.52
PPP4R1-213ENST00000579609 SIRT1Q96EB6 747 aa11.79□□□□□ -0.52
PPP4R1-213ENST00000579609 SSUH2Q9Y2M2 353 aa11.79□□□□□ -0.52
PPP4R1-213ENST00000579609 CGNL1Q0VF96 1302 aa11.79□□□□□ -0.52
PPP4R1-213ENST00000579609 NLRP1Q9C000 1473 aa11.78□□□□□ -0.52
PPP4R1-213ENST00000579609 TECPR2O15040 1411 aa11.77□□□□□ -0.52
PPP4R1-213ENST00000579609 UBR1Q8IWV7 1749 aa11.77□□□□□ -0.52
PPP4R1-213ENST00000579609 WDR43Q15061 677 aaKnown RBP eCLIP11.77□□□□□ -0.53
PPP4R1-213ENST00000579609 NRXN3Q9Y4C0 1643 aa11.77□□□□□ -0.53
PPP4R1-213ENST00000579609 ABCC11Q96J66 1382 aa11.77□□□□□ -0.53
PPP4R1-213ENST00000579609 FAM135BQ49AJ0 1406 aa11.77□□□□□ -0.53
PPP4R1-213ENST00000579609 RIMS2Q9UQ26 1411 aa11.77□□□□□ -0.53
PPP4R1-213ENST00000579609 CPS1P31327 1500 aa11.76□□□□□ -0.53
PPP4R1-213ENST00000579609 SHPRHQ149N8 1683 aa11.76□□□□□ -0.53
PPP4R1-213ENST00000579609 TRAK1Q9UPV9 953 aa11.76□□□□□ -0.53
PPP4R1-213ENST00000579609 NSD3Q9BZ95 1437 aa11.76□□□□□ -0.53
PPP4R1-213ENST00000579609 ATP7BP35670 1465 aa11.76□□□□□ -0.53
PPP4R1-213ENST00000579609 KIF20BQ96Q89 1820 aa11.74□□□□□ -0.53
PPP4R1-213ENST00000579609 ZMYM3Q14202 1370 aa11.74□□□□□ -0.53
PPP4R1-213ENST00000579609 ADGRB2O60241 1585 aa11.74□□□□□ -0.53
PPP4R1-213ENST00000579609 ZNF521Q96K83 1311 aa11.73□□□□□ -0.53
PPP4R1-213ENST00000579609 CARD14Q9BXL6 1004 aa11.73□□□□□ -0.53
PPP4R1-213ENST00000579609 ESF1Q9H501 851 aaKnown RBP11.73□□□□□ -0.53
PPP4R1-213ENST00000579609 DIP2AQ14689 1571 aa11.72□□□□□ -0.53
PPP4R1-213ENST00000579609 TNRQ92752 1358 aa11.72□□□□□ -0.53
PPP4R1-213ENST00000579609 STAG3Q9UJ98 1225 aa11.72□□□□□ -0.53
PPP4R1-213ENST00000579609 TMEM132EQ6IEE7 984 aa11.71□□□□□ -0.53
PPP4R1-213ENST00000579609 TERF2IPQ9NYB0 399 aa11.71□□□□□ -0.53
PPP4R1-213ENST00000579609 SLIT1O75093 1534 aa11.7□□□□□ -0.54
PPP4R1-213ENST00000579609 FBXO31Q5XUX0 539 aaPredicted RBP11.7□□□□□ -0.54
PPP4R1-213ENST00000579609 CFAP53Q96M91 514 aa11.7□□□□□ -0.54
PPP4R1-213ENST00000579609 TSHZ2Q9NRE2 1034 aa11.7□□□□□ -0.54
PPP4R1-213ENST00000579609 RCAN3Q9UKA8 241 aa11.7□□□□□ -0.54
PPP4R1-213ENST00000579609 ADAMTS8Q9UP79 889 aa11.7□□□□□ -0.54
PPP4R1-213ENST00000579609 CDC42BPGQ6DT37 1551 aa11.7□□□□□ -0.54
PPP4R1-213ENST00000579609 RRP1P56182 461 aaKnown RBP11.69□□□□□ -0.54
PPP4R1-213ENST00000579609 MORC1Q86VD1 984 aa11.69□□□□□ -0.54
PPP4R1-213ENST00000579609 FER1L4A9Z1Z3 1794 aa11.69□□□□□ -0.54
PPP4R1-213ENST00000579609 ARHGAP23Q9P227 1491 aa11.69□□□□□ -0.54
PPP4R1-213ENST00000579609 TMEM2Q9UHN6 1383 aa11.68□□□□□ -0.54
PPP4R1-213ENST00000579609 TRMT2AQ8IZ69 625 aaKnown RBP11.68□□□□□ -0.54
PPP4R1-213ENST00000579609 MON2Q7Z3U7 1717 aa11.68□□□□□ -0.54
PPP4R1-213ENST00000579609 IQSEC2Q5JU85 1478 aa11.68□□□□□ -0.54
PPP4R1-213ENST00000579609 CD163L1Q9NR16 1453 aa11.68□□□□□ -0.54
PPP4R1-213ENST00000579609 C3P01024 1663 aa11.68□□□□□ -0.54
PPP4R1-213ENST00000579609 A0A1W2PP64 1363 aa11.67□□□□□ -0.54
PPP4R1-213ENST00000579609 PLEKHG1Q9ULL1 1385 aa11.67□□□□□ -0.54
PPP4R1-213ENST00000579609 GOLGA2Q08379 1002 aa11.67□□□□□ -0.54
PPP4R1-213ENST00000579609 CCDC27Q2M243 656 aa11.67□□□□□ -0.54
PPP4R1-213ENST00000579609 BCANQ96GW7 911 aa11.67□□□□□ -0.54
PPP4R1-213ENST00000579609 POGKQ9P215 609 aa11.67□□□□□ -0.54
PPP4R1-213ENST00000579609 RIMS1Q86UR5 1692 aaKnown RBP11.67□□□□□ -0.54
PPP4R1-213ENST00000579609 AKAP12Q02952 1782 aa11.67□□□□□ -0.54
PPP4R1-213ENST00000579609 CNGB1Q14028 1251 aaPredicted RBP11.66□□□□□ -0.54
PPP4R1-213ENST00000579609 HDGFL2Q7Z4V5 671 aaPredicted RBP11.66□□□□□ -0.54
PPP4R1-213ENST00000579609 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.66□□□□□ -0.54
PPP4R1-213ENST00000579609 SLC12A5Q9H2X9 1139 aa11.66□□□□□ -0.54
PPP4R1-213ENST00000579609 ITSN1Q15811 1721 aa11.66□□□□□ -0.54
PPP4R1-213ENST00000579609 NKTRP30414 1462 aaKnown RBP11.65□□□□□ -0.54
PPP4R1-213ENST00000579609 E9PSI1 815 aa11.65□□□□□ -0.54
PPP4R1-213ENST00000579609 PLEKHH1Q9ULM0 1364 aa11.65□□□□□ -0.55
PPP4R1-213ENST00000579609 TOPAZ1Q8N9V7 1692 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms