RNA–Protein interactions for RNA: ENST00000579344.1

CCR7-203, Transcript of C-C motif chemokine receptor 7, humanhuman

TSL 1 (best) BASIC

Gene CCR7, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-203ENST00000579344 IFT140Q96RY7 1462 aa20.13■□□□□ 0.81
CCR7-203ENST00000579344 CLEC17AQ6ZS10 378 aa20.13■□□□□ 0.81
CCR7-203ENST00000579344 ZSCAN30Q86W11 494 aa20.13■□□□□ 0.81
CCR7-203ENST00000579344 PANK1Q8TE04 598 aa20.13■□□□□ 0.81
CCR7-203ENST00000579344 PHF23Q9BUL5 403 aaPredicted RBP20.13■□□□□ 0.81
CCR7-203ENST00000579344 PLB1Q6P1J6 1458 aa20.13■□□□□ 0.81
CCR7-203ENST00000579344 PCDHB15Q9Y5E8 787 aa20.12■□□□□ 0.81
CCR7-203ENST00000579344 CANXP27824 592 aaKnown RBP20.11■□□□□ 0.81
CCR7-203ENST00000579344 RBM25P49756 843 aaKnown RBP20.11■□□□□ 0.81
CCR7-203ENST00000579344 RARSP54136 660 aaKnown RBP20.11■□□□□ 0.81
CCR7-203ENST00000579344 MTERF4Q7Z6M4 381 aaKnown RBP20.11■□□□□ 0.81
CCR7-203ENST00000579344 WWC1Q8IX03 1113 aa20.1■□□□□ 0.81
CCR7-203ENST00000579344 IQSEC2Q5JU85 1478 aa20.1■□□□□ 0.81
CCR7-203ENST00000579344 RAB3GAP1Q15042 981 aa20.09■□□□□ 0.81
CCR7-203ENST00000579344 KIAA1211Q6ZU35 1233 aa20.09■□□□□ 0.81
CCR7-203ENST00000579344 TTC37Q6PGP7 1564 aa20.09■□□□□ 0.81
CCR7-203ENST00000579344 WDR63Q8IWG1 891 aa20.09■□□□□ 0.81
CCR7-203ENST00000579344 KIAA1210Q9ULL0 1709 aa20.08■□□□□ 0.8
CCR7-203ENST00000579344 KDM5AP29375 1690 aaKnown RBP20.08■□□□□ 0.8
CCR7-203ENST00000579344 PRDM4Q9UKN5 801 aa20.07■□□□□ 0.8
CCR7-203ENST00000579344 CT47B1P0C2W7 299 aaPredicted RBP20.07■□□□□ 0.8
CCR7-203ENST00000579344 HDAC1Q13547 482 aaPredicted RBP20.07■□□□□ 0.8
CCR7-203ENST00000579344 CCDC27Q2M243 656 aa20.07■□□□□ 0.8
CCR7-203ENST00000579344 CCDC146Q8IYE0 955 aa20.07■□□□□ 0.8
CCR7-203ENST00000579344 PREX2Q70Z35 1606 aa20.06■□□□□ 0.8
CCR7-203ENST00000579344 PLEKHD1A6NEE1 506 aa20.06■□□□□ 0.8
CCR7-203ENST00000579344 GAS2L3Q86XJ1 694 aa20.06■□□□□ 0.8
CCR7-203ENST00000579344 SAMD9LQ8IVG5 1584 aa20.06■□□□□ 0.8
CCR7-203ENST00000579344 CARMIL2Q6F5E8 1435 aa20.05■□□□□ 0.8
CCR7-203ENST00000579344 DMRT2Q9Y5R5 561 aa20.05■□□□□ 0.8
CCR7-203ENST00000579344 TNPO1Q92973 898 aaKnown RBP20.05■□□□□ 0.8
CCR7-203ENST00000579344 SPHKAPQ2M3C7 1700 aa20.04■□□□□ 0.8
CCR7-203ENST00000579344 NEURL4Q96JN8 1562 aa20.04■□□□□ 0.8
CCR7-203ENST00000579344 RGL3Q3MIN7 710 aa20.04■□□□□ 0.8
CCR7-203ENST00000579344 ARXQ96QS3 562 aa20.04■□□□□ 0.8
CCR7-203ENST00000579344 ZNF500O60304 480 aaPredicted RBP20.03■□□□□ 0.8
CCR7-203ENST00000579344 MVPQ14764 893 aaKnown RBP20.03■□□□□ 0.8
CCR7-203ENST00000579344 ANP32BQ92688 251 aaKnown RBP20.03■□□□□ 0.8
CCR7-203ENST00000579344 ATP10BO94823 1461 aa20.02■□□□□ 0.8
CCR7-203ENST00000579344 SMAP1Q8IYB5 467 aaPredicted RBP20.02■□□□□ 0.8
CCR7-203ENST00000579344 CEP152O94986 1710 aa20.02■□□□□ 0.8
CCR7-203ENST00000579344 RIPK4P57078 832 aa20.01■□□□□ 0.79
CCR7-203ENST00000579344 SHPRHQ149N8 1683 aa20.01■□□□□ 0.79
CCR7-203ENST00000579344 RLBP1P12271 317 aa20.01■□□□□ 0.79
CCR7-203ENST00000579344 MCM5P33992 734 aa20.01■□□□□ 0.79
CCR7-203ENST00000579344 ADGRL1O94910 1474 aa20■□□□□ 0.79
CCR7-203ENST00000579344 NASPP49321 788 aaPredicted RBP20■□□□□ 0.79
CCR7-203ENST00000579344 ZNF445P59923 1031 aa19.99■□□□□ 0.79
CCR7-203ENST00000579344 KLHL40Q2TBA0 621 aa19.99■□□□□ 0.79
CCR7-203ENST00000579344 MSNP26038 577 aaKnown RBP19.99■□□□□ 0.79
CCR7-203ENST00000579344 MFAP1P55081 439 aaKnown RBP19.99■□□□□ 0.79
CCR7-203ENST00000579344 RUNDC1Q96C34 613 aa19.99■□□□□ 0.79
CCR7-203ENST00000579344 KIF16BQ96L93 1317 aa19.98■□□□□ 0.79
CCR7-203ENST00000579344 GOLGA6L22H0YM25 854 aa19.97■□□□□ 0.79
CCR7-203ENST00000579344 NOL7Q9UMY1 257 aaKnown RBP19.97■□□□□ 0.79
CCR7-203ENST00000579344 REREQ9P2R6 1566 aa19.97■□□□□ 0.79
CCR7-203ENST00000579344 CDC42BPBQ9Y5S2 1711 aa19.97■□□□□ 0.79
CCR7-203ENST00000579344 SPRYD3Q8NCJ5 442 aa19.96■□□□□ 0.79
CCR7-203ENST00000579344 PODXL2Q9NZ53 605 aa19.96■□□□□ 0.79
CCR7-203ENST00000579344 HNRNPMP52272 730 aaKnown RBP eCLIP19.96■□□□□ 0.79
CCR7-203ENST00000579344 CSPP1Q1MSJ5 1256 aa19.96■□□□□ 0.79
CCR7-203ENST00000579344 PDLIM2Q96JY6 352 aa19.96■□□□□ 0.79
CCR7-203ENST00000579344 TRPM2O94759 1503 aa19.96■□□□□ 0.79
CCR7-203ENST00000579344 DYNC1I1O14576 645 aa19.95■□□□□ 0.78
CCR7-203ENST00000579344 SBNO2Q9Y2G9 1366 aa19.95■□□□□ 0.78
CCR7-203ENST00000579344 ZKSCAN2Q63HK3 967 aa19.94■□□□□ 0.78
CCR7-203ENST00000579344 USP32Q8NFA0 1604 aa19.93■□□□□ 0.78
CCR7-203ENST00000579344 MYO3AQ8NEV4 1616 aa19.92■□□□□ 0.78
CCR7-203ENST00000579344 ERVK-7P63135 1459 aa19.92■□□□□ 0.78
CCR7-203ENST00000579344 HSP90AB1P08238 724 aaKnown RBP19.92■□□□□ 0.78
CCR7-203ENST00000579344 DZIP1LQ8IYY4 767 aaKnown RBP19.92■□□□□ 0.78
CCR7-203ENST00000579344 PTPRTO14522 1441 aa19.91■□□□□ 0.78
CCR7-203ENST00000579344 ADGRB2O60241 1585 aa19.91■□□□□ 0.78
CCR7-203ENST00000579344 UTP14CQ5TAP6 766 aaKnown RBP19.91■□□□□ 0.78
CCR7-203ENST00000579344 DDX19BQ9UMR2 479 aa19.91■□□□□ 0.78
CCR7-203ENST00000579344 CFAP74Q9C0B2 1584 aa19.89■□□□□ 0.77
CCR7-203ENST00000579344 K7ELQ4 463 aaPredicted RBP19.88■□□□□ 0.77
CCR7-203ENST00000579344 BMP2KLQ5H9B9 411 aa19.88■□□□□ 0.77
CCR7-203ENST00000579344 YEATS2Q9ULM3 1422 aa19.88■□□□□ 0.77
CCR7-203ENST00000579344 SYCP2Q9BX26 1530 aa19.88■□□□□ 0.77
CCR7-203ENST00000579344 KIF2CQ99661 725 aa19.88■□□□□ 0.77
CCR7-203ENST00000579344 NUCB1Q02818 461 aa19.87■□□□□ 0.77
CCR7-203ENST00000579344 TCP11L2Q8N4U5 519 aa19.86■□□□□ 0.77
CCR7-203ENST00000579344 MYOM2P54296 1465 aa19.86■□□□□ 0.77
CCR7-203ENST00000579344 TNNQ9UQP3 1299 aa19.86■□□□□ 0.77
CCR7-203ENST00000579344 ZNF518AQ6AHZ1 1483 aa19.86■□□□□ 0.77
CCR7-203ENST00000579344 FTSJ3Q8IY81 847 aaKnown RBP19.85■□□□□ 0.77
CCR7-203ENST00000579344 CARD14Q9BXL6 1004 aa19.85■□□□□ 0.77
CCR7-203ENST00000579344 ZKSCAN5Q9Y2L8 839 aa19.85■□□□□ 0.77
CCR7-203ENST00000579344 BAG4O95429 457 aaKnown RBP19.84■□□□□ 0.77
CCR7-203ENST00000579344 SASS6Q6UVJ0 657 aa19.84■□□□□ 0.77
CCR7-203ENST00000579344 CFAP44Q96MT7 982 aa19.84■□□□□ 0.77
CCR7-203ENST00000579344 NUCB2P80303 420 aa19.83■□□□□ 0.76
CCR7-203ENST00000579344 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.83■□□□□ 0.76
CCR7-203ENST00000579344 CLTCL1P53675 1640 aa19.83■□□□□ 0.76
CCR7-203ENST00000579344 UQCRHLA0A096LP55 91 aa19.82■□□□□ 0.76
CCR7-203ENST00000579344 UQCRHP07919 91 aa19.82■□□□□ 0.76
CCR7-203ENST00000579344 DDX49Q9Y6V7 483 aaKnown RBP19.82■□□□□ 0.76
CCR7-203ENST00000579344 R3HCC1Q9Y3T6 440 aaKnown RBP19.82■□□□□ 0.76
CCR7-203ENST00000579344 NOS1P29475 1434 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms