RNA–Protein interactions for RNA: ENST00000578660.1

AC004477.1-201, humanhuman

Gene AC004477.1, Length 2,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004477.1-201ENST00000578660 PTPRMP28827 1452 aa13.98□□□□□ -0.17
AC004477.1-201ENST00000578660 USP32Q8NFA0 1604 aa13.98□□□□□ -0.17
AC004477.1-201ENST00000578660 HDGFP51858 240 aaKnown RBP13.97□□□□□ -0.17
AC004477.1-201ENST00000578660 TULP4Q9NRJ4 1543 aa13.97□□□□□ -0.17
AC004477.1-201ENST00000578660 ZBED9Q6R2W3 1325 aa13.97□□□□□ -0.17
AC004477.1-201ENST00000578660 UBE2Q2Q8WVN8 375 aa13.97□□□□□ -0.17
AC004477.1-201ENST00000578660 INSRP06213 1382 aa13.97□□□□□ -0.17
AC004477.1-201ENST00000578660 LRPPRCP42704 1394 aaKnown RBP13.97□□□□□ -0.17
AC004477.1-201ENST00000578660 NRXN3Q9Y4C0 1643 aa13.96□□□□□ -0.17
AC004477.1-201ENST00000578660 KNDC1Q76NI1 1749 aa13.96□□□□□ -0.17
AC004477.1-201ENST00000578660 EVC2Q86UK5 1308 aa13.96□□□□□ -0.17
AC004477.1-201ENST00000578660 NINLQ9Y2I6 1382 aa13.96□□□□□ -0.18
AC004477.1-201ENST00000578660 PNISRQ8TF01 805 aaKnown RBP13.95□□□□□ -0.18
AC004477.1-201ENST00000578660 AMER1Q5JTC6 1135 aaPredicted RBP13.94□□□□□ -0.18
AC004477.1-201ENST00000578660 CC2D1BQ5T0F9 858 aaKnown RBP13.94□□□□□ -0.18
AC004477.1-201ENST00000578660 TMEM2Q9UHN6 1383 aa13.92□□□□□ -0.18
AC004477.1-201ENST00000578660 NBR1Q14596 966 aa13.92□□□□□ -0.18
AC004477.1-201ENST00000578660 ATAD2Q6PL18 1390 aa13.9□□□□□ -0.18
AC004477.1-201ENST00000578660 ABCC11Q96J66 1382 aa13.9□□□□□ -0.18
AC004477.1-201ENST00000578660 DNAJC5Q9H3Z4 198 aa13.9□□□□□ -0.18
AC004477.1-201ENST00000578660 SLIT1O75093 1534 aa13.9□□□□□ -0.18
AC004477.1-201ENST00000578660 CPS1P31327 1500 aa13.9□□□□□ -0.18
AC004477.1-201ENST00000578660 TECPR2O15040 1411 aa13.89□□□□□ -0.19
AC004477.1-201ENST00000578660 ANKRD36BQ8N2N9 1353 aa13.89□□□□□ -0.19
AC004477.1-201ENST00000578660 POGKQ9P215 609 aa13.88□□□□□ -0.19
AC004477.1-201ENST00000578660 PLEKHG1Q9ULL1 1385 aa13.88□□□□□ -0.19
AC004477.1-201ENST00000578660 STK26Q9P289 416 aa13.88□□□□□ -0.19
AC004477.1-201ENST00000578660 ARHGAP23Q9P227 1491 aa13.88□□□□□ -0.19
AC004477.1-201ENST00000578660 NSD3Q9BZ95 1437 aa13.88□□□□□ -0.19
AC004477.1-201ENST00000578660 NSD2O96028 1365 aa13.88□□□□□ -0.19
AC004477.1-201ENST00000578660 BLMP54132 1417 aaPredicted RBP13.87□□□□□ -0.19
AC004477.1-201ENST00000578660 PRAM1Q96QH2 718 aa13.87□□□□□ -0.19
AC004477.1-201ENST00000578660 FAM135BQ49AJ0 1406 aa13.87□□□□□ -0.19
AC004477.1-201ENST00000578660 DIP2AQ14689 1571 aa13.87□□□□□ -0.19
AC004477.1-201ENST00000578660 PPP2R1AP30153 589 aa13.87□□□□□ -0.19
AC004477.1-201ENST00000578660 SIRT1Q96EB6 747 aa13.86□□□□□ -0.19
AC004477.1-201ENST00000578660 PPP4R2Q9NY27 417 aa13.86□□□□□ -0.19
AC004477.1-201ENST00000578660 RIMS1Q86UR5 1692 aaKnown RBP13.86□□□□□ -0.19
AC004477.1-201ENST00000578660 CARD14Q9BXL6 1004 aa13.85□□□□□ -0.19
AC004477.1-201ENST00000578660 NPM2Q86SE8 214 aaKnown RBP13.85□□□□□ -0.19
AC004477.1-201ENST00000578660 ADAMTSL3P82987 1691 aa13.84□□□□□ -0.19
AC004477.1-201ENST00000578660 ANKRD26Q9UPS8 1709 aa13.84□□□□□ -0.19
AC004477.1-201ENST00000578660 SMG6Q86US8 1419 aaKnown RBP13.84□□□□□ -0.19
AC004477.1-201ENST00000578660 ZNF142P52746 1687 aaPredicted RBP13.84□□□□□ -0.19
AC004477.1-201ENST00000578660 CGNL1Q0VF96 1302 aa13.83□□□□□ -0.19
AC004477.1-201ENST00000578660 ADAMTS13Q76LX8 1427 aa13.83□□□□□ -0.2
AC004477.1-201ENST00000578660 METP08581 1390 aa13.83□□□□□ -0.2
AC004477.1-201ENST00000578660 TULP1O00294 542 aaPredicted RBP13.83□□□□□ -0.2
AC004477.1-201ENST00000578660 SRPK2P78362 688 aaKnown RBP13.83□□□□□ -0.2
AC004477.1-201ENST00000578660 CCDC136Q96JN2 1154 aa13.83□□□□□ -0.2
AC004477.1-201ENST00000578660 SLC12A5Q9H2X9 1139 aa13.83□□□□□ -0.2
AC004477.1-201ENST00000578660 CEP170BQ9Y4F5 1589 aaPredicted RBP13.83□□□□□ -0.2
AC004477.1-201ENST00000578660 EID1Q9Y6B2 187 aa13.82□□□□□ -0.2
AC004477.1-201ENST00000578660 ADGRB2O60241 1585 aa13.82□□□□□ -0.2
AC004477.1-201ENST00000578660 MINK1Q8N4C8 1332 aaPredicted RBP13.82□□□□□ -0.2
AC004477.1-201ENST00000578660 MED14O60244 1454 aa13.82□□□□□ -0.2
AC004477.1-201ENST00000578660 CABP2Q9NPB3 220 aa13.82□□□□□ -0.2
AC004477.1-201ENST00000578660 SAFB2Q14151 953 aaKnown RBP eCLIP13.81□□□□□ -0.2
AC004477.1-201ENST00000578660 ATP7BP35670 1465 aa13.81□□□□□ -0.2
AC004477.1-201ENST00000578660 CEBPAP49715 358 aaPredicted RBP13.81□□□□□ -0.2
AC004477.1-201ENST00000578660 THEMISQ8N1K5 641 aaPredicted RBP13.8□□□□□ -0.2
AC004477.1-201ENST00000578660 TERF2IPQ9NYB0 399 aa13.8□□□□□ -0.2
AC004477.1-201ENST00000578660 WDR43Q15061 677 aaKnown RBP eCLIP13.8□□□□□ -0.2
AC004477.1-201ENST00000578660 KIF20BQ96Q89 1820 aa13.8□□□□□ -0.2
AC004477.1-201ENST00000578660 A0A1W2PP64 1363 aa13.8□□□□□ -0.2
AC004477.1-201ENST00000578660 POLR3AO14802 1390 aaPredicted RBP13.79□□□□□ -0.2
AC004477.1-201ENST00000578660 HOMEZQ8IX15 550 aa13.79□□□□□ -0.2
AC004477.1-201ENST00000578660 CDK19Q9BWU1 502 aa13.79□□□□□ -0.2
AC004477.1-201ENST00000578660 SENP3Q9H4L4 574 aaPredicted RBP13.79□□□□□ -0.2
AC004477.1-201ENST00000578660 CD163L1Q9NR16 1453 aa13.78□□□□□ -0.2
AC004477.1-201ENST00000578660 PLEKHH1Q9ULM0 1364 aa13.78□□□□□ -0.2
AC004477.1-201ENST00000578660 PDE3BQ13370 1112 aa13.78□□□□□ -0.2
AC004477.1-201ENST00000578660 MORC1Q86VD1 984 aa13.78□□□□□ -0.2
AC004477.1-201ENST00000578660 TXNDC2Q86VQ3 553 aa13.78□□□□□ -0.2
AC004477.1-201ENST00000578660 NUDCQ9Y266 331 aa13.78□□□□□ -0.2
AC004477.1-201ENST00000578660 HDGFL2Q7Z4V5 671 aaPredicted RBP13.77□□□□□ -0.2
AC004477.1-201ENST00000578660 PAK3O75914 559 aaPredicted RBP13.77□□□□□ -0.21
AC004477.1-201ENST00000578660 SKAP1Q86WV1 359 aa13.77□□□□□ -0.21
AC004477.1-201ENST00000578660 LTKP29376 864 aa13.76□□□□□ -0.21
AC004477.1-201ENST00000578660 PTCH1Q13635 1447 aa13.76□□□□□ -0.21
AC004477.1-201ENST00000578660 WAPLQ7Z5K2 1190 aa13.75□□□□□ -0.21
AC004477.1-201ENST00000578660 ANO8Q9HCE9 1232 aaPredicted RBP13.75□□□□□ -0.21
AC004477.1-201ENST00000578660 ERICH6BQ5W0A0 696 aa13.75□□□□□ -0.21
AC004477.1-201ENST00000578660 CDC42BPGQ6DT37 1551 aa13.75□□□□□ -0.21
AC004477.1-201ENST00000578660 ITSN1Q15811 1721 aa13.75□□□□□ -0.21
AC004477.1-201ENST00000578660 SHPRHQ149N8 1683 aa13.75□□□□□ -0.21
AC004477.1-201ENST00000578660 XRN1Q8IZH2 1706 aaKnown RBP13.74□□□□□ -0.21
AC004477.1-201ENST00000578660 WASLO00401 505 aaPredicted RBP13.74□□□□□ -0.21
AC004477.1-201ENST00000578660 TBX22Q9Y458 520 aa13.74□□□□□ -0.21
AC004477.1-201ENST00000578660 TOPAZ1Q8N9V7 1692 aa13.74□□□□□ -0.21
AC004477.1-201ENST00000578660 AKAP12Q02952 1782 aa13.74□□□□□ -0.21
AC004477.1-201ENST00000578660 MON2Q7Z3U7 1717 aa13.73□□□□□ -0.21
AC004477.1-201ENST00000578660 PIK3R4Q99570 1358 aa13.73□□□□□ -0.21
AC004477.1-201ENST00000578660 ROBO2Q9HCK4 1378 aa13.73□□□□□ -0.21
AC004477.1-201ENST00000578660 PLIN1O60240 522 aa13.73□□□□□ -0.21
AC004477.1-201ENST00000578660 ADAMTS8Q9UP79 889 aa13.73□□□□□ -0.21
AC004477.1-201ENST00000578660 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.72□□□□□ -0.21
AC004477.1-201ENST00000578660 NGEFQ8N5V2 710 aa13.72□□□□□ -0.21
AC004477.1-201ENST00000578660 CFAP53Q96M91 514 aa13.72□□□□□ -0.21
AC004477.1-201ENST00000578660 PPIP5K1Q6PFW1 1433 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms