RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 HAX1O00165 279 aa11.5□□□□□ -0.57
COPS3-215ENST00000578317 PSEN1P49768 467 aa11.5□□□□□ -0.57
COPS3-215ENST00000578317 RPGRIP1LQ68CZ1 1315 aa11.5□□□□□ -0.57
COPS3-215ENST00000578317 MS4A3Q96HJ5 214 aa11.49□□□□□ -0.57
COPS3-215ENST00000578317 RGL3Q3MIN7 710 aa11.49□□□□□ -0.57
COPS3-215ENST00000578317 TRPC6Q9Y210 931 aa11.49□□□□□ -0.57
COPS3-215ENST00000578317 SYNMO15061 1565 aa11.48□□□□□ -0.57
COPS3-215ENST00000578317 NLRP1Q9C000 1473 aa11.48□□□□□ -0.57
COPS3-215ENST00000578317 SPHKAPQ2M3C7 1700 aa11.47□□□□□ -0.57
COPS3-215ENST00000578317 DCAF11Q8TEB1 546 aa11.46□□□□□ -0.57
COPS3-215ENST00000578317 PREX1Q8TCU6 1659 aa11.46□□□□□ -0.57
COPS3-215ENST00000578317 PIK3C2BO00750 1634 aa11.46□□□□□ -0.58
COPS3-215ENST00000578317 CLTCL1P53675 1640 aa11.46□□□□□ -0.58
COPS3-215ENST00000578317 THEMISQ8N1K5 641 aaPredicted RBP11.46□□□□□ -0.58
COPS3-215ENST00000578317 UGGT1Q9NYU2 1555 aa11.45□□□□□ -0.58
COPS3-215ENST00000578317 HDGFP51858 240 aaKnown RBP11.45□□□□□ -0.58
COPS3-215ENST00000578317 POTEHQ6S545 545 aa11.45□□□□□ -0.58
COPS3-215ENST00000578317 ZNF326Q5BKZ1 582 aaKnown RBP11.44□□□□□ -0.58
COPS3-215ENST00000578317 A2ML1A8K2U0 1454 aa11.43□□□□□ -0.58
COPS3-215ENST00000578317 ZFYVE9O95405 1425 aa11.43□□□□□ -0.58
COPS3-215ENST00000578317 UHRF1BP1Q6BDS2 1440 aa11.43□□□□□ -0.58
COPS3-215ENST00000578317 ADGRB3O60242 1522 aa11.43□□□□□ -0.58
COPS3-215ENST00000578317 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.42□□□□□ -0.58
COPS3-215ENST00000578317 GALR2O43603 387 aaPredicted RBP11.41□□□□□ -0.58
COPS3-215ENST00000578317 NBPF8Q3BBV2 869 aa11.41□□□□□ -0.58
COPS3-215ENST00000578317 TMEM2Q9UHN6 1383 aa11.41□□□□□ -0.58
COPS3-215ENST00000578317 TMEM131LA2VDJ0 1609 aa11.4□□□□□ -0.58
COPS3-215ENST00000578317 SETD1BQ9UPS6 1966 aaKnown RBP11.4□□□□□ -0.59
COPS3-215ENST00000578317 CFAP65Q6ZU64 1925 aaKnown RBP11.4□□□□□ -0.59
COPS3-215ENST00000578317 MYO3AQ8NEV4 1616 aa11.39□□□□□ -0.59
COPS3-215ENST00000578317 MYOM2P54296 1465 aa11.39□□□□□ -0.59
COPS3-215ENST00000578317 PRAG1Q86YV5 1406 aa11.39□□□□□ -0.59
COPS3-215ENST00000578317 ADGRF5Q8IZF2 1346 aa11.39□□□□□ -0.59
COPS3-215ENST00000578317 NRXN1Q9ULB1 1477 aa11.38□□□□□ -0.59
COPS3-215ENST00000578317 KDM5AP29375 1690 aaKnown RBP11.38□□□□□ -0.59
COPS3-215ENST00000578317 C14orf93Q9H972 538 aaKnown RBP11.38□□□□□ -0.59
COPS3-215ENST00000578317 CABP2Q9NPB3 220 aa11.38□□□□□ -0.59
COPS3-215ENST00000578317 EID1Q9Y6B2 187 aa11.38□□□□□ -0.59
COPS3-215ENST00000578317 LMTK3Q96Q04 1460 aa11.37□□□□□ -0.59
COPS3-215ENST00000578317 RIMS2Q9UQ26 1411 aa11.37□□□□□ -0.59
COPS3-215ENST00000578317 TXNDC2Q86VQ3 553 aa11.37□□□□□ -0.59
COPS3-215ENST00000578317 MFRPQ9BY79 579 aa11.37□□□□□ -0.59
COPS3-215ENST00000578317 ARHGAP23Q9P227 1491 aa11.37□□□□□ -0.59
COPS3-215ENST00000578317 SLIT1O75093 1534 aa11.36□□□□□ -0.59
COPS3-215ENST00000578317 LTKP29376 864 aa11.36□□□□□ -0.59
COPS3-215ENST00000578317 EFCAB3Q8N7B9 438 aa11.36□□□□□ -0.59
COPS3-215ENST00000578317 KIF1BO60333 1816 aa11.36□□□□□ -0.59
COPS3-215ENST00000578317 NEXMIFQ5QGS0 1516 aa11.36□□□□□ -0.59
COPS3-215ENST00000578317 ZNF142P52746 1687 aaPredicted RBP11.35□□□□□ -0.59
COPS3-215ENST00000578317 ANKLE2Q86XL3 938 aa11.35□□□□□ -0.59
COPS3-215ENST00000578317 TMEM106CQ9BVX2 250 aa11.35□□□□□ -0.59
COPS3-215ENST00000578317 CEP170BQ9Y4F5 1589 aaPredicted RBP11.35□□□□□ -0.59
COPS3-215ENST00000578317 PIK3C2GO75747 1445 aa11.34□□□□□ -0.59
COPS3-215ENST00000578317 GPRASP1Q5JY77 1395 aa11.34□□□□□ -0.59
COPS3-215ENST00000578317 CFAP70Q5T0N1 1121 aa11.34□□□□□ -0.59
COPS3-215ENST00000578317 NUTM2DQ5VT03 806 aaPredicted RBP11.34□□□□□ -0.59
COPS3-215ENST00000578317 TIE1P35590 1138 aa11.33□□□□□ -0.6
COPS3-215ENST00000578317 NBPF1Q3BBV0 1214 aa11.33□□□□□ -0.6
COPS3-215ENST00000578317 BMP2KQ9NSY1 1161 aaPredicted RBP11.33□□□□□ -0.6
COPS3-215ENST00000578317 PLEKHG1Q9ULL1 1385 aa11.33□□□□□ -0.6
COPS3-215ENST00000578317 TTLL13PA6NNM8 815 aa11.32□□□□□ -0.6
COPS3-215ENST00000578317 UBR1Q8IWV7 1749 aa11.32□□□□□ -0.6
COPS3-215ENST00000578317 RALGAPBQ86X10 1494 aa11.32□□□□□ -0.6
COPS3-215ENST00000578317 CARD11Q9BXL7 1154 aa11.31□□□□□ -0.6
COPS3-215ENST00000578317 TBX22Q9Y458 520 aa11.31□□□□□ -0.6
COPS3-215ENST00000578317 FBXO22Q8NEZ5 403 aa11.31□□□□□ -0.6
COPS3-215ENST00000578317 ROCK2O75116 1388 aaKnown RBP11.31□□□□□ -0.6
COPS3-215ENST00000578317 SCAF11Q99590 1463 aaKnown RBP11.3□□□□□ -0.6
COPS3-215ENST00000578317 CLCN6P51797 869 aa11.3□□□□□ -0.6
COPS3-215ENST00000578317 HSPA2P54652 639 aa11.3□□□□□ -0.6
COPS3-215ENST00000578317 EIF4G2P78344 907 aaKnown RBP eCLIP11.29□□□□□ -0.6
COPS3-215ENST00000578317 PHF8Q9UPP1 1060 aa11.29□□□□□ -0.6
COPS3-215ENST00000578317 PPLO60437 1756 aa11.28□□□□□ -0.6
COPS3-215ENST00000578317 MYO5BQ9ULV0 1848 aa11.28□□□□□ -0.6
COPS3-215ENST00000578317 IFT172Q9UG01 1749 aa11.28□□□□□ -0.6
COPS3-215ENST00000578317 MED14O60244 1454 aa11.28□□□□□ -0.6
COPS3-215ENST00000578317 GABBR2O75899 941 aa11.27□□□□□ -0.6
COPS3-215ENST00000578317 SETBP1Q9Y6X0 1596 aa11.27□□□□□ -0.61
COPS3-215ENST00000578317 ADAMTS13Q76LX8 1427 aa11.27□□□□□ -0.61
COPS3-215ENST00000578317 TMEM132EQ6IEE7 984 aa11.27□□□□□ -0.61
COPS3-215ENST00000578317 SIRT1Q96EB6 747 aa11.27□□□□□ -0.61
COPS3-215ENST00000578317 WDR70Q9NW82 654 aa11.27□□□□□ -0.61
COPS3-215ENST00000578317 PIK3R4Q99570 1358 aa11.26□□□□□ -0.61
COPS3-215ENST00000578317 SOX12O15370 315 aa11.26□□□□□ -0.61
COPS3-215ENST00000578317 NCKAP5LQ9HCH0 1330 aa11.26□□□□□ -0.61
COPS3-215ENST00000578317 ABCC11Q96J66 1382 aa11.26□□□□□ -0.61
COPS3-215ENST00000578317 SLC26A8Q96RN1 970 aa11.25□□□□□ -0.61
COPS3-215ENST00000578317 KIAA1210Q9ULL0 1709 aa11.25□□□□□ -0.61
COPS3-215ENST00000578317 STRCQ7RTU9 1775 aa11.25□□□□□ -0.61
COPS3-215ENST00000578317 ALKQ9UM73 1620 aa11.25□□□□□ -0.61
COPS3-215ENST00000578317 HSPA5P11021 654 aaKnown RBP11.24□□□□□ -0.61
COPS3-215ENST00000578317 MS4A4AQ96JQ5 239 aa11.24□□□□□ -0.61
COPS3-215ENST00000578317 ADGRB1O14514 1584 aa11.24□□□□□ -0.61
COPS3-215ENST00000578317 TRPM1Q7Z4N2 1603 aa11.24□□□□□ -0.61
COPS3-215ENST00000578317 METP08581 1390 aa11.24□□□□□ -0.61
COPS3-215ENST00000578317 USP47Q96K76 1375 aa11.24□□□□□ -0.61
COPS3-215ENST00000578317 NPHP4O75161 1426 aaPredicted RBP11.24□□□□□ -0.61
COPS3-215ENST00000578317 PPP1R37O75864 691 aa11.24□□□□□ -0.61
COPS3-215ENST00000578317 TRIM35Q9UPQ4 493 aa11.24□□□□□ -0.61
COPS3-215ENST00000578317 LRPPRCP42704 1394 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms