RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 NPHP3Q7Z494 1330 aa16.18■□□□□ 0.18
CALCOCO2-228ENST00000576582 ZRANB1Q9UGI0 708 aa16.17■□□□□ 0.18
CALCOCO2-228ENST00000576582 KIF1BO60333 1816 aa16.17■□□□□ 0.18
CALCOCO2-228ENST00000576582 ESCO1Q5FWF5 840 aa16.16■□□□□ 0.18
CALCOCO2-228ENST00000576582 ATRNO75882 1429 aa16.16■□□□□ 0.18
CALCOCO2-228ENST00000576582 LRPPRCP42704 1394 aaKnown RBP16.13■□□□□ 0.17
CALCOCO2-228ENST00000576582 PPARGC1BQ86YN6 1023 aaKnown RBP16.13■□□□□ 0.17
CALCOCO2-228ENST00000576582 COL22A1Q8NFW1 1626 aaPredicted RBP16.12■□□□□ 0.17
CALCOCO2-228ENST00000576582 FOXO3O43524 673 aa16.12■□□□□ 0.17
CALCOCO2-228ENST00000576582 GJD4Q96KN9 370 aaPredicted RBP16.12■□□□□ 0.17
CALCOCO2-228ENST00000576582 MYOM2P54296 1465 aa16.11■□□□□ 0.17
CALCOCO2-228ENST00000576582 BCL9LQ86UU0 1499 aa16.11■□□□□ 0.17
CALCOCO2-228ENST00000576582 SLC4A1APQ9BWU0 796 aaKnown RBP16.11■□□□□ 0.17
CALCOCO2-228ENST00000576582 PXDNQ92626 1479 aa16.08■□□□□ 0.16
CALCOCO2-228ENST00000576582 CDC42BPGQ6DT37 1551 aa16.08■□□□□ 0.16
CALCOCO2-228ENST00000576582 PPLO60437 1756 aa16.08■□□□□ 0.16
CALCOCO2-228ENST00000576582 XPCQ01831 940 aaPredicted RBP16.07■□□□□ 0.16
CALCOCO2-228ENST00000576582 UNC5CLQ8IV45 518 aa16.07■□□□□ 0.16
CALCOCO2-228ENST00000576582 EP400Q96L91 3159 aa16.06■□□□□ 0.16
CALCOCO2-228ENST00000576582 ABCC11Q96J66 1382 aa16.05■□□□□ 0.16
CALCOCO2-228ENST00000576582 ADGRF5Q8IZF2 1346 aa16.05■□□□□ 0.16
CALCOCO2-228ENST00000576582 WAPLQ7Z5K2 1190 aa16.05■□□□□ 0.16
CALCOCO2-228ENST00000576582 STK26Q9P289 416 aa16.05■□□□□ 0.16
CALCOCO2-228ENST00000576582 TECPR2O15040 1411 aa16.04■□□□□ 0.16
CALCOCO2-228ENST00000576582 ANKRD30BQ9BXX2 1392 aa16.04■□□□□ 0.16
CALCOCO2-228ENST00000576582 SPATA31A3Q5VYP0 1347 aa16.04■□□□□ 0.16
CALCOCO2-228ENST00000576582 SIRT1Q96EB6 747 aa16.04■□□□□ 0.16
CALCOCO2-228ENST00000576582 NUTM2FA1L443 756 aa16.02■□□□□ 0.16
CALCOCO2-228ENST00000576582 RGL3Q3MIN7 710 aa16.02■□□□□ 0.16
CALCOCO2-228ENST00000576582 KRT28Q7Z3Y7 464 aa16.02■□□□□ 0.16
CALCOCO2-228ENST00000576582 BLMP54132 1417 aaPredicted RBP16.02■□□□□ 0.15
CALCOCO2-228ENST00000576582 SLIT2O94813 1529 aa16.01■□□□□ 0.15
CALCOCO2-228ENST00000576582 PSME1Q06323 249 aa16.01■□□□□ 0.15
CALCOCO2-228ENST00000576582 MARF1Q9Y4F3 1742 aaKnown RBP16.01■□□□□ 0.15
CALCOCO2-228ENST00000576582 CCDC144AA2RUR9 1427 aa16.01■□□□□ 0.15
CALCOCO2-228ENST00000576582 RALGAPBQ86X10 1494 aa16■□□□□ 0.15
CALCOCO2-228ENST00000576582 ONECUT3O60422 494 aaPredicted RBP16■□□□□ 0.15
CALCOCO2-228ENST00000576582 SF3B2Q13435 895 aaKnown RBP16■□□□□ 0.15
CALCOCO2-228ENST00000576582 TMEM132EQ6IEE7 984 aa16■□□□□ 0.15
CALCOCO2-228ENST00000576582 SPATA31E1Q6ZUB1 1445 aa15.99■□□□□ 0.15
CALCOCO2-228ENST00000576582 HAP1P54257 671 aaPredicted RBP15.98■□□□□ 0.15
CALCOCO2-228ENST00000576582 VPS72Q15906 364 aa15.98■□□□□ 0.15
CALCOCO2-228ENST00000576582 SEPT12Q8IYM1 358 aa15.98■□□□□ 0.15
CALCOCO2-228ENST00000576582 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.98■□□□□ 0.15
CALCOCO2-228ENST00000576582 IFT172Q9UG01 1749 aa15.97■□□□□ 0.15
CALCOCO2-228ENST00000576582 PHF8Q9UPP1 1060 aa15.97■□□□□ 0.15
CALCOCO2-228ENST00000576582 PLEKHH1Q9ULM0 1364 aa15.97■□□□□ 0.15
CALCOCO2-228ENST00000576582 KNDC1Q76NI1 1749 aa15.96■□□□□ 0.15
CALCOCO2-228ENST00000576582 GLI3P10071 1580 aa15.96■□□□□ 0.14
CALCOCO2-228ENST00000576582 YTHDC2Q9H6S0 1430 aaKnown RBP15.95■□□□□ 0.14
CALCOCO2-228ENST00000576582 DEFB132Q7Z7B7 95 aa15.95■□□□□ 0.14
CALCOCO2-228ENST00000576582 MPHOSPH9Q99550 1183 aa15.95■□□□□ 0.14
CALCOCO2-228ENST00000576582 C14orf93Q9H972 538 aaKnown RBP15.95■□□□□ 0.14
CALCOCO2-228ENST00000576582 KIF1AQ12756 1690 aa15.95■□□□□ 0.14
CALCOCO2-228ENST00000576582 PIK3C2GO75747 1445 aa15.94■□□□□ 0.14
CALCOCO2-228ENST00000576582 KRT27Q7Z3Y8 459 aa15.94■□□□□ 0.14
CALCOCO2-228ENST00000576582 SBNO1A3KN83 1393 aa15.94■□□□□ 0.14
CALCOCO2-228ENST00000576582 ARHGEF10O15013 1369 aa15.93■□□□□ 0.14
CALCOCO2-228ENST00000576582 DHX57Q6P158 1386 aaKnown RBP15.93■□□□□ 0.14
CALCOCO2-228ENST00000576582 CABLES1Q8TDN4 633 aa15.93■□□□□ 0.14
CALCOCO2-228ENST00000576582 CCDC9Q9Y3X0 531 aaKnown RBP15.93■□□□□ 0.14
CALCOCO2-228ENST00000576582 TNS3Q68CZ2 1445 aa15.93■□□□□ 0.14
CALCOCO2-228ENST00000576582 ACIN1Q9UKV3 1341 aaKnown RBP15.93■□□□□ 0.14
CALCOCO2-228ENST00000576582 FMN2Q9NZ56 1722 aa15.92■□□□□ 0.14
CALCOCO2-228ENST00000576582 HRCP23327 699 aa15.92■□□□□ 0.14
CALCOCO2-228ENST00000576582 USP32Q8NFA0 1604 aa15.91■□□□□ 0.14
CALCOCO2-228ENST00000576582 FAM83GA6ND36 823 aa15.91■□□□□ 0.14
CALCOCO2-228ENST00000576582 LMOD2Q6P5Q4 547 aa15.91■□□□□ 0.14
CALCOCO2-228ENST00000576582 BAG6P46379 1132 aa15.89■□□□□ 0.13
CALCOCO2-228ENST00000576582 NRXN1Q9ULB1 1477 aa15.89■□□□□ 0.13
CALCOCO2-228ENST00000576582 CFAP70Q5T0N1 1121 aa15.88■□□□□ 0.13
CALCOCO2-228ENST00000576582 PRAM1Q96QH2 718 aa15.88■□□□□ 0.13
CALCOCO2-228ENST00000576582 BRWD3Q6RI45 1802 aa15.87■□□□□ 0.13
CALCOCO2-228ENST00000576582 POGKQ9P215 609 aa15.87■□□□□ 0.13
CALCOCO2-228ENST00000576582 NWD2Q9ULI1 1742 aa15.87■□□□□ 0.13
CALCOCO2-228ENST00000576582 PLEKHG5O94827 1062 aa15.86■□□□□ 0.13
CALCOCO2-228ENST00000576582 ANKARQ7Z5J8 1434 aa15.85■□□□□ 0.13
CALCOCO2-228ENST00000576582 A0A0G2JS52 829 aa15.85■□□□□ 0.13
CALCOCO2-228ENST00000576582 MYT1Q01538 1121 aa15.85■□□□□ 0.13
CALCOCO2-228ENST00000576582 SAFB2Q14151 953 aaKnown RBP eCLIP15.85■□□□□ 0.13
CALCOCO2-228ENST00000576582 PMFBP1Q8TBY8 1022 aa15.85■□□□□ 0.13
CALCOCO2-228ENST00000576582 BTG4Q9NY30 223 aa15.85■□□□□ 0.13
CALCOCO2-228ENST00000576582 FAM98CQ17RN3 349 aaKnown RBP15.84■□□□□ 0.13
CALCOCO2-228ENST00000576582 GPRASP1Q5JY77 1395 aa15.84■□□□□ 0.13
CALCOCO2-228ENST00000576582 RGPD8O14715 1765 aaPredicted RBP15.82■□□□□ 0.12
CALCOCO2-228ENST00000576582 EIF3AQ14152 1382 aaKnown RBP15.82■□□□□ 0.12
CALCOCO2-228ENST00000576582 LRP5O75197 1615 aa15.82■□□□□ 0.12
CALCOCO2-228ENST00000576582 PLCH1Q4KWH8 1693 aa15.82■□□□□ 0.12
CALCOCO2-228ENST00000576582 PSDA5PKW4 1024 aaPredicted RBP15.81■□□□□ 0.12
CALCOCO2-228ENST00000576582 DLC1Q96QB1 1528 aa15.81■□□□□ 0.12
CALCOCO2-228ENST00000576582 SPATA31A5Q5VU36 1347 aa15.8■□□□□ 0.12
CALCOCO2-228ENST00000576582 SPATA31A7Q8IWB4 1347 aa15.8■□□□□ 0.12
CALCOCO2-228ENST00000576582 EN1Q05925 392 aaPredicted RBP15.79■□□□□ 0.12
CALCOCO2-228ENST00000576582 ADGRB2O60241 1585 aa15.79■□□□□ 0.12
CALCOCO2-228ENST00000576582 STAC3Q96MF2 364 aa15.78■□□□□ 0.12
CALCOCO2-228ENST00000576582 ABCA3Q99758 1704 aa15.77■□□□□ 0.12
CALCOCO2-228ENST00000576582 WASLO00401 505 aaPredicted RBP15.77■□□□□ 0.12
CALCOCO2-228ENST00000576582 NGDNQ8NEJ9 315 aaKnown RBP15.77■□□□□ 0.12
CALCOCO2-228ENST00000576582 HIRIP3Q9BW71 556 aaPredicted RBP15.77■□□□□ 0.12
CALCOCO2-228ENST00000576582 TRAK1Q9UPV9 953 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms