RNA–Protein interactions for RNA: ENST00000575934.5

ABR-233, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-233ENST00000575934 NUTM2BA6NNL0 878 aaPredicted RBP30.22■■■□□ 2.43
ABR-233ENST00000575934 NUTM2EB1AL46 878 aaPredicted RBP30.22■■■□□ 2.43
ABR-233ENST00000575934 ZNF772Q68DY9 489 aaPredicted RBP30.22■■■□□ 2.43
ABR-233ENST00000575934 NUTM2AQ8IVF1 878 aaPredicted RBP30.22■■■□□ 2.43
ABR-233ENST00000575934 STK26Q9P289 416 aa30.22■■■□□ 2.43
ABR-233ENST00000575934 YTHDC2Q9H6S0 1430 aaKnown RBP30.22■■■□□ 2.43
ABR-233ENST00000575934 SOS2Q07890 1332 aaPredicted RBP30.22■■■□□ 2.43
ABR-233ENST00000575934 TMEM132EQ6IEE7 984 aa30.21■■■□□ 2.43
ABR-233ENST00000575934 WAPLQ7Z5K2 1190 aa30.19■■■□□ 2.42
ABR-233ENST00000575934 FMN2Q9NZ56 1722 aa30.19■■■□□ 2.42
ABR-233ENST00000575934 C14orf93Q9H972 538 aaKnown RBP30.18■■■□□ 2.42
ABR-233ENST00000575934 PLEKHH1Q9ULM0 1364 aa30.17■■■□□ 2.42
ABR-233ENST00000575934 COL22A1Q8NFW1 1626 aaPredicted RBP30.14■■■□□ 2.42
ABR-233ENST00000575934 HRCP23327 699 aa30.13■■■□□ 2.41
ABR-233ENST00000575934 SIRT1Q96EB6 747 aa30.13■■■□□ 2.41
ABR-233ENST00000575934 AFF2P51816 1311 aa30.12■■■□□ 2.41
ABR-233ENST00000575934 ESCO1Q5FWF5 840 aa30.11■■■□□ 2.41
ABR-233ENST00000575934 CFAP70Q5T0N1 1121 aa30.11■■■□□ 2.41
ABR-233ENST00000575934 PXDNQ92626 1479 aa30.11■■■□□ 2.41
ABR-233ENST00000575934 NPHP3Q7Z494 1330 aa30.1■■■□□ 2.41
ABR-233ENST00000575934 DHX57Q6P158 1386 aaKnown RBP30.1■■■□□ 2.41
ABR-233ENST00000575934 RGPD8O14715 1765 aaPredicted RBP30.09■■■□□ 2.41
ABR-233ENST00000575934 KIF1AQ12756 1690 aa30.09■■■□□ 2.41
ABR-233ENST00000575934 DLC1Q96QB1 1528 aa30.06■■■□□ 2.4
ABR-233ENST00000575934 ADGRB1O14514 1584 aa30.06■■■□□ 2.4
ABR-233ENST00000575934 CDK12Q9NYV4 1490 aaPredicted RBP30.06■■■□□ 2.4
ABR-233ENST00000575934 C8orf37Q96NL8 207 aa30.05■■■□□ 2.4
ABR-233ENST00000575934 NUTM2FA1L443 756 aa30.04■■■□□ 2.4
ABR-233ENST00000575934 RXRBP28702 533 aa30.04■■■□□ 2.4
ABR-233ENST00000575934 MARF1Q9Y4F3 1742 aaKnown RBP30.04■■■□□ 2.4
ABR-233ENST00000575934 FOXO3O43524 673 aa30.02■■■□□ 2.4
ABR-233ENST00000575934 ADAMTS2O95450 1211 aa30■■■□□ 2.39
ABR-233ENST00000575934 ADGRB2O60241 1585 aa29.98■■■□□ 2.39
ABR-233ENST00000575934 PRAM1Q96QH2 718 aa29.98■■■□□ 2.39
ABR-233ENST00000575934 XPCQ01831 940 aaPredicted RBP29.97■■■□□ 2.39
ABR-233ENST00000575934 NGLY1Q96IV0 654 aa29.96■■■□□ 2.39
ABR-233ENST00000575934 DCAF11Q8TEB1 546 aa29.95■■■□□ 2.39
ABR-233ENST00000575934 STAC3Q96MF2 364 aa29.95■■■□□ 2.39
ABR-233ENST00000575934 USP32Q8NFA0 1604 aa29.94■■■□□ 2.38
ABR-233ENST00000575934 QTRT2Q9H974 415 aaKnown RBP29.94■■■□□ 2.38
ABR-233ENST00000575934 KDM2AQ9Y2K7 1162 aa29.94■■■□□ 2.38
ABR-233ENST00000575934 RBM6P78332 1123 aaKnown RBP29.92■■■□□ 2.38
ABR-233ENST00000575934 SAFB2Q14151 953 aaKnown RBP eCLIP29.92■■■□□ 2.38
ABR-233ENST00000575934 RGS12O14924 1447 aa29.91■■■□□ 2.38
ABR-233ENST00000575934 FNBP4Q8N3X1 1017 aaPredicted RBP29.9■■■□□ 2.38
ABR-233ENST00000575934 POGKQ9P215 609 aa29.9■■■□□ 2.38
ABR-233ENST00000575934 ANKARQ7Z5J8 1434 aa29.89■■■□□ 2.38
ABR-233ENST00000575934 ARHGEF28Q8N1W1 1705 aaKnown RBP29.89■■■□□ 2.38
ABR-233ENST00000575934 PHF8Q9UPP1 1060 aa29.89■■■□□ 2.38
ABR-233ENST00000575934 SPATA31A3Q5VYP0 1347 aa29.89■■■□□ 2.38
ABR-233ENST00000575934 USP21Q9UK80 565 aa29.88■■■□□ 2.37
ABR-233ENST00000575934 UPF1Q92900 1129 aaKnown RBP eCLIP29.87■■■□□ 2.37
ABR-233ENST00000575934 TRAK1Q9UPV9 953 aa29.87■■■□□ 2.37
ABR-233ENST00000575934 KRT28Q7Z3Y7 464 aa29.86■■■□□ 2.37
ABR-233ENST00000575934 ATRNO75882 1429 aa29.85■■■□□ 2.37
ABR-233ENST00000575934 TNS3Q68CZ2 1445 aa29.85■■■□□ 2.37
ABR-233ENST00000575934 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.85■■■□□ 2.37
ABR-233ENST00000575934 KIAA1210Q9ULL0 1709 aa29.84■■■□□ 2.37
ABR-233ENST00000575934 TRPC5Q9UL62 973 aaPredicted RBP29.83■■■□□ 2.37
ABR-233ENST00000575934 ABCA3Q99758 1704 aa29.82■■■□□ 2.36
ABR-233ENST00000575934 BCL9LQ86UU0 1499 aa29.81■■■□□ 2.36
ABR-233ENST00000575934 TULP4Q9NRJ4 1543 aa29.81■■■□□ 2.36
ABR-233ENST00000575934 SBNO1A3KN83 1393 aa29.8■■■□□ 2.36
ABR-233ENST00000575934 TRPM3Q9HCF6 1732 aaPredicted RBP29.8■■■□□ 2.36
ABR-233ENST00000575934 EIF3AQ14152 1382 aaKnown RBP29.79■■■□□ 2.36
ABR-233ENST00000575934 PSME1Q06323 249 aa29.79■■■□□ 2.36
ABR-233ENST00000575934 HIRIP3Q9BW71 556 aaPredicted RBP29.79■■■□□ 2.36
ABR-233ENST00000575934 MINK1Q8N4C8 1332 aaPredicted RBP29.78■■■□□ 2.36
ABR-233ENST00000575934 ITSN1Q15811 1721 aa29.76■■■□□ 2.35
ABR-233ENST00000575934 SLIT2O94813 1529 aa29.76■■■□□ 2.35
ABR-233ENST00000575934 PRR36Q9H6K5 1346 aa29.75■■■□□ 2.35
ABR-233ENST00000575934 WASLO00401 505 aaPredicted RBP29.74■■■□□ 2.35
ABR-233ENST00000575934 PMFBP1Q8TBY8 1022 aa29.74■■■□□ 2.35
ABR-233ENST00000575934 ALS2Q96Q42 1657 aa29.74■■■□□ 2.35
ABR-233ENST00000575934 ARHGEF10O15013 1369 aa29.73■■■□□ 2.35
ABR-233ENST00000575934 PLCH1Q4KWH8 1693 aa29.72■■■□□ 2.35
ABR-233ENST00000575934 NWD2Q9ULI1 1742 aa29.71■■■□□ 2.35
ABR-233ENST00000575934 ATP7BP35670 1465 aa29.68■■■□□ 2.34
ABR-233ENST00000575934 UNC5CLQ8IV45 518 aa29.67■■■□□ 2.34
ABR-233ENST00000575934 CABLES1Q8TDN4 633 aa29.67■■■□□ 2.34
ABR-233ENST00000575934 GLI3P10071 1580 aa29.67■■■□□ 2.34
ABR-233ENST00000575934 GJD4Q96KN9 370 aaPredicted RBP29.66■■■□□ 2.34
ABR-233ENST00000575934 GPRASP1Q5JY77 1395 aa29.65■■■□□ 2.34
ABR-233ENST00000575934 ATAD2Q6PL18 1390 aa29.65■■■□□ 2.34
ABR-233ENST00000575934 CRYBG1Q9Y4K1 1723 aa29.65■■■□□ 2.34
ABR-233ENST00000575934 HAP1P54257 671 aaPredicted RBP29.65■■■□□ 2.34
ABR-233ENST00000575934 LMOD2Q6P5Q4 547 aa29.65■■■□□ 2.34
ABR-233ENST00000575934 TOPAZ1Q8N9V7 1692 aa29.65■■■□□ 2.34
ABR-233ENST00000575934 RALGAPBQ86X10 1494 aa29.63■■■□□ 2.33
ABR-233ENST00000575934 NBPF1Q3BBV0 1214 aa29.6■■■□□ 2.33
ABR-233ENST00000575934 NRAPQ86VF7 1730 aa29.59■■■□□ 2.33
ABR-233ENST00000575934 BRWD3Q6RI45 1802 aa29.59■■■□□ 2.33
ABR-233ENST00000575934 NUDT16Q96DE0 195 aaKnown RBP29.59■■■□□ 2.33
ABR-233ENST00000575934 PLEKHG5O94827 1062 aa29.58■■■□□ 2.33
ABR-233ENST00000575934 NGDNQ8NEJ9 315 aaKnown RBP29.58■■■□□ 2.33
ABR-233ENST00000575934 CDK19Q9BWU1 502 aa29.56■■■□□ 2.32
ABR-233ENST00000575934 COL14A1Q05707 1796 aaKnown RBP29.56■■■□□ 2.32
ABR-233ENST00000575934 EP400Q96L91 3159 aa29.55■■■□□ 2.32
ABR-233ENST00000575934 QRICH2Q9H0J4 1663 aa29.54■■■□□ 2.32
ABR-233ENST00000575934 VPS72Q15906 364 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms