RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 NAIPQ13075 1403 aa15.15■□□□□ 0.02
CALCOCO2-227ENST00000575560 KIF1BO60333 1816 aa15.14■□□□□ 0.01
CALCOCO2-227ENST00000575560 NPHP3Q7Z494 1330 aa15.14■□□□□ 0.01
CALCOCO2-227ENST00000575560 MYOM2P54296 1465 aa15.14■□□□□ 0.01
CALCOCO2-227ENST00000575560 BCL9LQ86UU0 1499 aa15.14■□□□□ 0.01
CALCOCO2-227ENST00000575560 COL22A1Q8NFW1 1626 aaPredicted RBP15.14■□□□□ 0.01
CALCOCO2-227ENST00000575560 ESCO1Q5FWF5 840 aa15.13■□□□□ 0.01
CALCOCO2-227ENST00000575560 CCDC125Q86Z20 511 aa15.13■□□□□ 0.01
CALCOCO2-227ENST00000575560 ZRANB1Q9UGI0 708 aa15.12■□□□□ 0.01
CALCOCO2-227ENST00000575560 FOXO3O43524 673 aa15.11■□□□□ 0.01
CALCOCO2-227ENST00000575560 GJD4Q96KN9 370 aaPredicted RBP15.11■□□□□ 0.01
CALCOCO2-227ENST00000575560 PXDNQ92626 1479 aa15.11■□□□□ 0.01
CALCOCO2-227ENST00000575560 RRBP1Q9P2E9 1410 aaKnown RBP15.09■□□□□ 0.01
CALCOCO2-227ENST00000575560 XPCQ01831 940 aaPredicted RBP15.08■□□□□ 0
CALCOCO2-227ENST00000575560 SLC4A1APQ9BWU0 796 aaKnown RBP15.08■□□□□ 0
CALCOCO2-227ENST00000575560 CDC42BPGQ6DT37 1551 aa15.07■□□□□ 0
CALCOCO2-227ENST00000575560 ADRA2BP18089 450 aa15.07■□□□□ 0
CALCOCO2-227ENST00000575560 WAPLQ7Z5K2 1190 aa15.07■□□□□ 0
CALCOCO2-227ENST00000575560 ADGRF5Q8IZF2 1346 aa15.07■□□□□ 0
CALCOCO2-227ENST00000575560 LRPPRCP42704 1394 aaKnown RBP15.07■□□□□ 0
CALCOCO2-227ENST00000575560 PPLO60437 1756 aa15.06■□□□□ 0
CALCOCO2-227ENST00000575560 UNC5CLQ8IV45 518 aa15.05■□□□□ -0
CALCOCO2-227ENST00000575560 STK26Q9P289 416 aa15.05■□□□□ -0
CALCOCO2-227ENST00000575560 TECPR2O15040 1411 aa15.05■□□□□ -0
CALCOCO2-227ENST00000575560 ABCC11Q96J66 1382 aa15.04■□□□□ -0
CALCOCO2-227ENST00000575560 SPATA31A3Q5VYP0 1347 aa15.04■□□□□ -0
CALCOCO2-227ENST00000575560 NUTM2FA1L443 756 aa15.04■□□□□ -0
CALCOCO2-227ENST00000575560 SLIT2O94813 1529 aa15.03■□□□□ -0
CALCOCO2-227ENST00000575560 MARF1Q9Y4F3 1742 aaKnown RBP15.03■□□□□ -0
CALCOCO2-227ENST00000575560 TMEM132EQ6IEE7 984 aa15.02■□□□□ -0
CALCOCO2-227ENST00000575560 RALGAPBQ86X10 1494 aa15.01□□□□□ -0.01
CALCOCO2-227ENST00000575560 PLEKHH1Q9ULM0 1364 aa15.01□□□□□ -0.01
CALCOCO2-227ENST00000575560 RGL3Q3MIN7 710 aa15.01□□□□□ -0.01
CALCOCO2-227ENST00000575560 KRT28Q7Z3Y7 464 aa15.01□□□□□ -0.01
CALCOCO2-227ENST00000575560 BLMP54132 1417 aaPredicted RBP15□□□□□ -0.01
CALCOCO2-227ENST00000575560 SPATA31E1Q6ZUB1 1445 aa15□□□□□ -0.01
CALCOCO2-227ENST00000575560 ANKRD30BQ9BXX2 1392 aa15□□□□□ -0.01
CALCOCO2-227ENST00000575560 GLI3P10071 1580 aa15□□□□□ -0.01
CALCOCO2-227ENST00000575560 ONECUT3O60422 494 aaPredicted RBP15□□□□□ -0.01
CALCOCO2-227ENST00000575560 SIRT1Q96EB6 747 aa15□□□□□ -0.01
CALCOCO2-227ENST00000575560 TNKS1BP1Q9C0C2 1729 aaKnown RBP15□□□□□ -0.01
CALCOCO2-227ENST00000575560 VPS72Q15906 364 aa14.98□□□□□ -0.01
CALCOCO2-227ENST00000575560 DEFB132Q7Z7B7 95 aa14.98□□□□□ -0.01
CALCOCO2-227ENST00000575560 CCDC144AA2RUR9 1427 aa14.98□□□□□ -0.01
CALCOCO2-227ENST00000575560 SEPT12Q8IYM1 358 aa14.97□□□□□ -0.01
CALCOCO2-227ENST00000575560 PIK3C2GO75747 1445 aa14.97□□□□□ -0.01
CALCOCO2-227ENST00000575560 YTHDC2Q9H6S0 1430 aaKnown RBP14.96□□□□□ -0.01
CALCOCO2-227ENST00000575560 PHF8Q9UPP1 1060 aa14.96□□□□□ -0.01
CALCOCO2-227ENST00000575560 FMN2Q9NZ56 1722 aa14.95□□□□□ -0.02
CALCOCO2-227ENST00000575560 PSME1Q06323 249 aa14.95□□□□□ -0.02
CALCOCO2-227ENST00000575560 CABLES1Q8TDN4 633 aa14.95□□□□□ -0.02
CALCOCO2-227ENST00000575560 MPHOSPH9Q99550 1183 aa14.95□□□□□ -0.02
CALCOCO2-227ENST00000575560 C14orf93Q9H972 538 aaKnown RBP14.95□□□□□ -0.02
CALCOCO2-227ENST00000575560 USP32Q8NFA0 1604 aa14.95□□□□□ -0.02
CALCOCO2-227ENST00000575560 KNDC1Q76NI1 1749 aa14.94□□□□□ -0.02
CALCOCO2-227ENST00000575560 KIF1AQ12756 1690 aa14.93□□□□□ -0.02
CALCOCO2-227ENST00000575560 TNS3Q68CZ2 1445 aa14.93□□□□□ -0.02
CALCOCO2-227ENST00000575560 HAP1P54257 671 aaPredicted RBP14.93□□□□□ -0.02
CALCOCO2-227ENST00000575560 SF3B2Q13435 895 aaKnown RBP14.93□□□□□ -0.02
CALCOCO2-227ENST00000575560 SBNO1A3KN83 1393 aa14.93□□□□□ -0.02
CALCOCO2-227ENST00000575560 IFT172Q9UG01 1749 aa14.92□□□□□ -0.02
CALCOCO2-227ENST00000575560 BRWD3Q6RI45 1802 aa14.92□□□□□ -0.02
CALCOCO2-227ENST00000575560 FAM83GA6ND36 823 aa14.92□□□□□ -0.02
CALCOCO2-227ENST00000575560 KRT27Q7Z3Y8 459 aa14.92□□□□□ -0.02
CALCOCO2-227ENST00000575560 NRXN1Q9ULB1 1477 aa14.9□□□□□ -0.02
CALCOCO2-227ENST00000575560 CFAP70Q5T0N1 1121 aa14.9□□□□□ -0.02
CALCOCO2-227ENST00000575560 CCDC9Q9Y3X0 531 aaKnown RBP14.9□□□□□ -0.02
CALCOCO2-227ENST00000575560 ARHGEF10O15013 1369 aa14.89□□□□□ -0.03
CALCOCO2-227ENST00000575560 DHX57Q6P158 1386 aaKnown RBP14.89□□□□□ -0.03
CALCOCO2-227ENST00000575560 PRAM1Q96QH2 718 aa14.89□□□□□ -0.03
CALCOCO2-227ENST00000575560 NWD2Q9ULI1 1742 aa14.89□□□□□ -0.03
CALCOCO2-227ENST00000575560 PLEKHG5O94827 1062 aa14.88□□□□□ -0.03
CALCOCO2-227ENST00000575560 LMOD2Q6P5Q4 547 aa14.88□□□□□ -0.03
CALCOCO2-227ENST00000575560 RGPD8O14715 1765 aaPredicted RBP14.88□□□□□ -0.03
CALCOCO2-227ENST00000575560 SAFB2Q14151 953 aaKnown RBP eCLIP14.87□□□□□ -0.03
CALCOCO2-227ENST00000575560 PMFBP1Q8TBY8 1022 aa14.87□□□□□ -0.03
CALCOCO2-227ENST00000575560 BAG6P46379 1132 aa14.86□□□□□ -0.03
CALCOCO2-227ENST00000575560 PLCH1Q4KWH8 1693 aa14.86□□□□□ -0.03
CALCOCO2-227ENST00000575560 ANKARQ7Z5J8 1434 aa14.85□□□□□ -0.03
CALCOCO2-227ENST00000575560 HRCP23327 699 aa14.85□□□□□ -0.03
CALCOCO2-227ENST00000575560 FAM98CQ17RN3 349 aaKnown RBP14.85□□□□□ -0.03
CALCOCO2-227ENST00000575560 BTG4Q9NY30 223 aa14.85□□□□□ -0.03
CALCOCO2-227ENST00000575560 LRP5O75197 1615 aa14.84□□□□□ -0.03
CALCOCO2-227ENST00000575560 PSDA5PKW4 1024 aaPredicted RBP14.84□□□□□ -0.03
CALCOCO2-227ENST00000575560 POGKQ9P215 609 aa14.84□□□□□ -0.03
CALCOCO2-227ENST00000575560 ABCA3Q99758 1704 aa14.83□□□□□ -0.03
CALCOCO2-227ENST00000575560 DLC1Q96QB1 1528 aa14.82□□□□□ -0.04
CALCOCO2-227ENST00000575560 A0A0G2JS52 829 aa14.82□□□□□ -0.04
CALCOCO2-227ENST00000575560 MYT1Q01538 1121 aa14.82□□□□□ -0.04
CALCOCO2-227ENST00000575560 SPATA31A5Q5VU36 1347 aa14.82□□□□□ -0.04
CALCOCO2-227ENST00000575560 SPATA31A7Q8IWB4 1347 aa14.82□□□□□ -0.04
CALCOCO2-227ENST00000575560 EN1Q05925 392 aaPredicted RBP14.81□□□□□ -0.04
CALCOCO2-227ENST00000575560 ACIN1Q9UKV3 1341 aaKnown RBP14.81□□□□□ -0.04
CALCOCO2-227ENST00000575560 NRAPQ86VF7 1730 aa14.8□□□□□ -0.04
CALCOCO2-227ENST00000575560 FAM182BQ5T319 152 aa14.8□□□□□ -0.04
CALCOCO2-227ENST00000575560 PRR36Q9H6K5 1346 aa14.8□□□□□ -0.04
CALCOCO2-227ENST00000575560 GPRASP1Q5JY77 1395 aa14.8□□□□□ -0.04
CALCOCO2-227ENST00000575560 ADGRB2O60241 1585 aa14.79□□□□□ -0.04
CALCOCO2-227ENST00000575560 HIRIP3Q9BW71 556 aaPredicted RBP14.79□□□□□ -0.04
CALCOCO2-227ENST00000575560 TRPM3Q9HCF6 1732 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms