RNA–Protein interactions for RNA: ENST00000574412.5

CXCL16-203, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-203ENST00000574412 STRCP1A6NGW2 1772 aa29.52■■■□□ 2.32
CXCL16-203ENST00000574412 SBNO2Q9Y2G9 1366 aa29.51■■■□□ 2.31
CXCL16-203ENST00000574412 NWD1Q149M9 1564 aa29.51■■■□□ 2.31
CXCL16-203ENST00000574412 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.49■■■□□ 2.31
CXCL16-203ENST00000574412 SIRT1Q96EB6 747 aa29.49■■■□□ 2.31
CXCL16-203ENST00000574412 RBM33Q96EV2 1170 aaKnown RBP29.49■■■□□ 2.31
CXCL16-203ENST00000574412 TULP4Q9NRJ4 1543 aa29.48■■■□□ 2.31
CXCL16-203ENST00000574412 DDX10Q13206 875 aaKnown RBP29.45■■■□□ 2.31
CXCL16-203ENST00000574412 DMRT2Q9Y5R5 561 aa29.43■■■□□ 2.3
CXCL16-203ENST00000574412 EVC2Q86UK5 1308 aa29.42■■■□□ 2.3
CXCL16-203ENST00000574412 ZNF335Q9H4Z2 1342 aaPredicted RBP29.42■■■□□ 2.3
CXCL16-203ENST00000574412 NALCNQ8IZF0 1738 aa29.4■■■□□ 2.3
CXCL16-203ENST00000574412 NKTRP30414 1462 aaKnown RBP29.4■■■□□ 2.3
CXCL16-203ENST00000574412 SLC24A1O60721 1099 aa29.4■■■□□ 2.3
CXCL16-203ENST00000574412 CABP2Q9NPB3 220 aa29.4■■■□□ 2.3
CXCL16-203ENST00000574412 PROSER2Q86WR7 435 aaPredicted RBP29.39■■■□□ 2.3
CXCL16-203ENST00000574412 SRPK2P78362 688 aaKnown RBP29.38■■■□□ 2.29
CXCL16-203ENST00000574412 CDCA8Q53HL2 280 aa29.37■■■□□ 2.29
CXCL16-203ENST00000574412 CDK19Q9BWU1 502 aa29.37■■■□□ 2.29
CXCL16-203ENST00000574412 ADGRB2O60241 1585 aa29.36■■■□□ 2.29
CXCL16-203ENST00000574412 MYOM1P52179 1685 aa29.36■■■□□ 2.29
CXCL16-203ENST00000574412 WASLO00401 505 aaPredicted RBP29.34■■■□□ 2.29
CXCL16-203ENST00000574412 C14orf37Q86TY3 774 aa29.34■■■□□ 2.29
CXCL16-203ENST00000574412 NUTM2FA1L443 756 aa29.31■■■□□ 2.28
CXCL16-203ENST00000574412 TMEM94Q12767 1356 aa29.3■■■□□ 2.28
CXCL16-203ENST00000574412 XIRP1Q702N8 1843 aaKnown RBP29.3■■■□□ 2.28
CXCL16-203ENST00000574412 ADGRL3Q9HAR2 1447 aa29.29■■■□□ 2.28
CXCL16-203ENST00000574412 TMC1Q8TDI8 760 aa29.28■■■□□ 2.28
CXCL16-203ENST00000574412 MIER1Q8N108 512 aa29.28■■■□□ 2.28
CXCL16-203ENST00000574412 RGPD8O14715 1765 aaPredicted RBP29.25■■■□□ 2.27
CXCL16-203ENST00000574412 LRRC7Q96NW7 1537 aa29.25■■■□□ 2.27
CXCL16-203ENST00000574412 CDC42BPGQ6DT37 1551 aa29.25■■■□□ 2.27
CXCL16-203ENST00000574412 FMN2Q9NZ56 1722 aa29.25■■■□□ 2.27
CXCL16-203ENST00000574412 SLC12A5Q9H2X9 1139 aa29.24■■■□□ 2.27
CXCL16-203ENST00000574412 ATAD2Q6PL18 1390 aa29.23■■■□□ 2.27
CXCL16-203ENST00000574412 PRR36Q9H6K5 1346 aa29.23■■■□□ 2.27
CXCL16-203ENST00000574412 USP32Q8NFA0 1604 aa29.22■■■□□ 2.27
CXCL16-203ENST00000574412 PUS7Q96PZ0 661 aaKnown RBP29.22■■■□□ 2.27
CXCL16-203ENST00000574412 ATP7BP35670 1465 aa29.22■■■□□ 2.27
CXCL16-203ENST00000574412 NUDT16Q96DE0 195 aaKnown RBP29.21■■■□□ 2.27
CXCL16-203ENST00000574412 PANK3Q9H999 370 aa29.2■■■□□ 2.26
CXCL16-203ENST00000574412 CABP1Q9NZU7 370 aa29.18■■■□□ 2.26
CXCL16-203ENST00000574412 TOPAZ1Q8N9V7 1692 aa29.17■■■□□ 2.26
CXCL16-203ENST00000574412 PPIP5K1Q6PFW1 1433 aa29.17■■■□□ 2.26
CXCL16-203ENST00000574412 C19orf44Q9H6X5 657 aa29.16■■■□□ 2.26
CXCL16-203ENST00000574412 NCOA3Q9Y6Q9 1424 aa29.15■■■□□ 2.26
CXCL16-203ENST00000574412 ITSN1Q15811 1721 aa29.15■■■□□ 2.26
CXCL16-203ENST00000574412 LTBP4Q8N2S1 1624 aa29.15■■■□□ 2.26
CXCL16-203ENST00000574412 CNGB1Q14028 1251 aaPredicted RBP29.14■■■□□ 2.26
CXCL16-203ENST00000574412 CCDC61Q9Y6R9 512 aa29.14■■■□□ 2.26
CXCL16-203ENST00000574412 MSH6P52701 1360 aa29.13■■■□□ 2.25
CXCL16-203ENST00000574412 NINLQ9Y2I6 1382 aa29.11■■■□□ 2.25
CXCL16-203ENST00000574412 ANKARQ7Z5J8 1434 aa29.1■■■□□ 2.25
CXCL16-203ENST00000574412 ATF3P18847 181 aa29.1■■■□□ 2.25
CXCL16-203ENST00000574412 CD163L1Q9NR16 1453 aa29.1■■■□□ 2.25
CXCL16-203ENST00000574412 A0A1W2PP64 1363 aa29.09■■■□□ 2.25
CXCL16-203ENST00000574412 ANKRD36BQ8N2N9 1353 aa29.08■■■□□ 2.25
CXCL16-203ENST00000574412 PMFBP1Q8TBY8 1022 aa29.08■■■□□ 2.25
CXCL16-203ENST00000574412 CARD14Q9BXL6 1004 aa29.08■■■□□ 2.25
CXCL16-203ENST00000574412 DCCP43146 1447 aa29.07■■■□□ 2.24
CXCL16-203ENST00000574412 PER1O15534 1290 aaPredicted RBP29.05■■■□□ 2.24
CXCL16-203ENST00000574412 TERF2IPQ9NYB0 399 aa29.05■■■□□ 2.24
CXCL16-203ENST00000574412 AKAP12Q02952 1782 aa29.05■■■□□ 2.24
CXCL16-203ENST00000574412 NSD3Q9BZ95 1437 aa29.04■■■□□ 2.24
CXCL16-203ENST00000574412 HDGFL2Q7Z4V5 671 aaPredicted RBP29.04■■■□□ 2.24
CXCL16-203ENST00000574412 CADPS2Q86UW7 1296 aa29.04■■■□□ 2.24
CXCL16-203ENST00000574412 MST1RQ04912 1400 aa29.03■■■□□ 2.24
CXCL16-203ENST00000574412 ESCO1Q5FWF5 840 aa29.03■■■□□ 2.24
CXCL16-203ENST00000574412 ANP32CO43423 234 aa29.02■■■□□ 2.24
CXCL16-203ENST00000574412 KNSTRNQ9Y448 316 aa29.02■■■□□ 2.24
CXCL16-203ENST00000574412 C1orf167Q5SNV9 1468 aa29.02■■■□□ 2.24
CXCL16-203ENST00000574412 ACEP12821 1306 aa29.02■■■□□ 2.24
CXCL16-203ENST00000574412 ORAI2Q96SN7 254 aa29.02■■■□□ 2.24
CXCL16-203ENST00000574412 MON2Q7Z3U7 1717 aa29.01■■■□□ 2.23
CXCL16-203ENST00000574412 KTN1Q86UP2 1357 aaKnown RBP29■■■□□ 2.23
CXCL16-203ENST00000574412 PLEKHG3A1L390 1219 aa29■■■□□ 2.23
CXCL16-203ENST00000574412 CPSF1Q10570 1443 aaKnown RBP28.99■■■□□ 2.23
CXCL16-203ENST00000574412 NGDNQ8NEJ9 315 aaKnown RBP28.99■■■□□ 2.23
CXCL16-203ENST00000574412 PHF8Q9UPP1 1060 aa28.99■■■□□ 2.23
CXCL16-203ENST00000574412 CC2D1BQ5T0F9 858 aaKnown RBP28.97■■■□□ 2.23
CXCL16-203ENST00000574412 POLR3AO14802 1390 aaPredicted RBP28.94■■■□□ 2.22
CXCL16-203ENST00000574412 AMER1Q5JTC6 1135 aaPredicted RBP28.93■■■□□ 2.22
CXCL16-203ENST00000574412 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.93■■■□□ 2.22
CXCL16-203ENST00000574412 KIF1AQ12756 1690 aa28.92■■■□□ 2.22
CXCL16-203ENST00000574412 NRKQ7Z2Y5 1582 aa28.92■■■□□ 2.22
CXCL16-203ENST00000574412 USP6P35125 1406 aa28.91■■■□□ 2.22
CXCL16-203ENST00000574412 ZNF692Q9BU19 519 aaPredicted RBP28.91■■■□□ 2.22
CXCL16-203ENST00000574412 SLAIN2Q9P270 581 aa28.91■■■□□ 2.22
CXCL16-203ENST00000574412 KIF20BQ96Q89 1820 aa28.91■■■□□ 2.22
CXCL16-203ENST00000574412 EDC4Q6P2E9 1401 aaKnown RBP28.9■■■□□ 2.22
CXCL16-203ENST00000574412 PRKRIP1Q9H875 184 aaPredicted RBP28.89■■■□□ 2.22
CXCL16-203ENST00000574412 CGNL1Q0VF96 1302 aa28.89■■■□□ 2.22
CXCL16-203ENST00000574412 FOXO3O43524 673 aa28.89■■■□□ 2.21
CXCL16-203ENST00000574412 XPCQ01831 940 aaPredicted RBP28.87■■■□□ 2.21
CXCL16-203ENST00000574412 DDX17Q92841 729 aaKnown RBP28.86■■■□□ 2.21
CXCL16-203ENST00000574412 PSME1Q06323 249 aa28.85■■■□□ 2.21
CXCL16-203ENST00000574412 BRINP3Q76B58 766 aa28.85■■■□□ 2.21
CXCL16-203ENST00000574412 GGNBP2Q9H3C7 697 aa28.85■■■□□ 2.21
CXCL16-203ENST00000574412 CCER2I3L3R5 266 aa28.84■■■□□ 2.21
CXCL16-203ENST00000574412 TTC21BQ7Z4L5 1316 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms