RNA–Protein interactions for RNA: ENST00000574266.1

ABR-227, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-227ENST00000574266 AFF2P51816 1311 aa25.5■■□□□ 1.67
ABR-227ENST00000574266 NPHP3Q7Z494 1330 aa25.5■■□□□ 1.67
ABR-227ENST00000574266 NGLY1Q96IV0 654 aa25.5■■□□□ 1.67
ABR-227ENST00000574266 DHX57Q6P158 1386 aaKnown RBP25.49■■□□□ 1.67
ABR-227ENST00000574266 ABCC11Q96J66 1382 aa25.49■■□□□ 1.67
ABR-227ENST00000574266 SOS2Q07890 1332 aaPredicted RBP25.48■■□□□ 1.67
ABR-227ENST00000574266 ADAMTS2O95450 1211 aa25.48■■□□□ 1.67
ABR-227ENST00000574266 C14orf93Q9H972 538 aaKnown RBP25.48■■□□□ 1.67
ABR-227ENST00000574266 PNPLA6Q8IY17 1366 aa25.47■■□□□ 1.67
ABR-227ENST00000574266 SIRT1Q96EB6 747 aa25.47■■□□□ 1.67
ABR-227ENST00000574266 NUTM2FA1L443 756 aa25.46■■□□□ 1.67
ABR-227ENST00000574266 QTRT2Q9H974 415 aaKnown RBP25.45■■□□□ 1.66
ABR-227ENST00000574266 PIK3C2GO75747 1445 aa25.45■■□□□ 1.66
ABR-227ENST00000574266 YTHDC2Q9H6S0 1430 aaKnown RBP25.44■■□□□ 1.66
ABR-227ENST00000574266 FOXO3O43524 673 aa25.43■■□□□ 1.66
ABR-227ENST00000574266 HRCP23327 699 aa25.43■■□□□ 1.66
ABR-227ENST00000574266 CFAP70Q5T0N1 1121 aa25.43■■□□□ 1.66
ABR-227ENST00000574266 POGKQ9P215 609 aa25.43■■□□□ 1.66
ABR-227ENST00000574266 TECPR2O15040 1411 aa25.43■■□□□ 1.66
ABR-227ENST00000574266 RBM6P78332 1123 aaKnown RBP25.41■■□□□ 1.66
ABR-227ENST00000574266 STAC3Q96MF2 364 aa25.4■■□□□ 1.66
ABR-227ENST00000574266 KDM2AQ9Y2K7 1162 aa25.4■■□□□ 1.66
ABR-227ENST00000574266 IFT172Q9UG01 1749 aa25.4■■□□□ 1.66
ABR-227ENST00000574266 CDC42BPGQ6DT37 1551 aa25.39■■□□□ 1.66
ABR-227ENST00000574266 PSME1Q06323 249 aa25.37■■□□□ 1.65
ABR-227ENST00000574266 DCAF11Q8TEB1 546 aa25.37■■□□□ 1.65
ABR-227ENST00000574266 USP21Q9UK80 565 aa25.37■■□□□ 1.65
ABR-227ENST00000574266 XPCQ01831 940 aaPredicted RBP25.36■■□□□ 1.65
ABR-227ENST00000574266 MYOM2P54296 1465 aa25.35■■□□□ 1.65
ABR-227ENST00000574266 PLEKHH1Q9ULM0 1364 aa25.35■■□□□ 1.65
ABR-227ENST00000574266 SAFB2Q14151 953 aaKnown RBP eCLIP25.35■■□□□ 1.65
ABR-227ENST00000574266 PRAM1Q96QH2 718 aa25.35■■□□□ 1.65
ABR-227ENST00000574266 TRPC5Q9UL62 973 aaPredicted RBP25.34■■□□□ 1.65
ABR-227ENST00000574266 LAMC1P11047 1609 aa25.34■■□□□ 1.65
ABR-227ENST00000574266 HAP1P54257 671 aaPredicted RBP25.33■■□□□ 1.65
ABR-227ENST00000574266 KNDC1Q76NI1 1749 aa25.33■■□□□ 1.65
ABR-227ENST00000574266 KRT28Q7Z3Y7 464 aa25.32■■□□□ 1.64
ABR-227ENST00000574266 CDK12Q9NYV4 1490 aaPredicted RBP25.32■■□□□ 1.64
ABR-227ENST00000574266 PHF8Q9UPP1 1060 aa25.31■■□□□ 1.64
ABR-227ENST00000574266 NRXN1Q9ULB1 1477 aa25.3■■□□□ 1.64
ABR-227ENST00000574266 UPF1Q92900 1129 aaKnown RBP eCLIP25.3■■□□□ 1.64
ABR-227ENST00000574266 TRAK1Q9UPV9 953 aa25.29■■□□□ 1.64
ABR-227ENST00000574266 FNBP4Q8N3X1 1017 aaPredicted RBP25.28■■□□□ 1.64
ABR-227ENST00000574266 LMOD2Q6P5Q4 547 aa25.27■■□□□ 1.64
ABR-227ENST00000574266 PXDNQ92626 1479 aa25.25■■□□□ 1.63
ABR-227ENST00000574266 SPATA31A3Q5VYP0 1347 aa25.24■■□□□ 1.63
ABR-227ENST00000574266 EIF3AQ14152 1382 aaKnown RBP25.23■■□□□ 1.63
ABR-227ENST00000574266 FMN2Q9NZ56 1722 aa25.23■■□□□ 1.63
ABR-227ENST00000574266 KIF1AQ12756 1690 aa25.23■■□□□ 1.63
ABR-227ENST00000574266 COL22A1Q8NFW1 1626 aaPredicted RBP25.21■■□□□ 1.63
ABR-227ENST00000574266 PMFBP1Q8TBY8 1022 aa25.2■■□□□ 1.62
ABR-227ENST00000574266 HIRIP3Q9BW71 556 aaPredicted RBP25.2■■□□□ 1.62
ABR-227ENST00000574266 DLC1Q96QB1 1528 aa25.2■■□□□ 1.62
ABR-227ENST00000574266 MINK1Q8N4C8 1332 aaPredicted RBP25.19■■□□□ 1.62
ABR-227ENST00000574266 PLEKHG5O94827 1062 aa25.19■■□□□ 1.62
ABR-227ENST00000574266 GPRASP1Q5JY77 1395 aa25.17■■□□□ 1.62
ABR-227ENST00000574266 RGS12O14924 1447 aa25.16■■□□□ 1.62
ABR-227ENST00000574266 ANKARQ7Z5J8 1434 aa25.16■■□□□ 1.62
ABR-227ENST00000574266 ARHGEF10O15013 1369 aa25.16■■□□□ 1.62
ABR-227ENST00000574266 WASLO00401 505 aaPredicted RBP25.15■■□□□ 1.62
ABR-227ENST00000574266 UNC5CLQ8IV45 518 aa25.15■■□□□ 1.62
ABR-227ENST00000574266 NGDNQ8NEJ9 315 aaKnown RBP25.15■■□□□ 1.62
ABR-227ENST00000574266 SBNO1A3KN83 1393 aa25.15■■□□□ 1.62
ABR-227ENST00000574266 ATAD2Q6PL18 1390 aa25.15■■□□□ 1.62
ABR-227ENST00000574266 GJD4Q96KN9 370 aaPredicted RBP25.14■■□□□ 1.62
ABR-227ENST00000574266 ATRNO75882 1429 aa25.13■■□□□ 1.61
ABR-227ENST00000574266 TNS3Q68CZ2 1445 aa25.13■■□□□ 1.61
ABR-227ENST00000574266 CCDC9Q9Y3X0 531 aaKnown RBP25.11■■□□□ 1.61
ABR-227ENST00000574266 PAK3O75914 559 aaPredicted RBP25.1■■□□□ 1.61
ABR-227ENST00000574266 CABLES1Q8TDN4 633 aa25.1■■□□□ 1.61
ABR-227ENST00000574266 RGPD8O14715 1765 aaPredicted RBP25.1■■□□□ 1.61
ABR-227ENST00000574266 ADGRB1O14514 1584 aa25.1■■□□□ 1.61
ABR-227ENST00000574266 BCL9LQ86UU0 1499 aa25.09■■□□□ 1.61
ABR-227ENST00000574266 MARF1Q9Y4F3 1742 aaKnown RBP25.06■■□□□ 1.6
ABR-227ENST00000574266 CCDC125Q86Z20 511 aa25.05■■□□□ 1.6
ABR-227ENST00000574266 ADGRB2O60241 1585 aa25.05■■□□□ 1.6
ABR-227ENST00000574266 NUDT16Q96DE0 195 aaKnown RBP25.04■■□□□ 1.6
ABR-227ENST00000574266 CDK19Q9BWU1 502 aa25.03■■□□□ 1.6
ABR-227ENST00000574266 TULP4Q9NRJ4 1543 aa25.02■■□□□ 1.6
ABR-227ENST00000574266 VPS72Q15906 364 aa25.01■■□□□ 1.59
ABR-227ENST00000574266 SLIT2O94813 1529 aa25.01■■□□□ 1.59
ABR-227ENST00000574266 PRR36Q9H6K5 1346 aa25■■□□□ 1.59
ABR-227ENST00000574266 USP32Q8NFA0 1604 aa25■■□□□ 1.59
ABR-227ENST00000574266 A0A0G2JS52 829 aa24.99■■□□□ 1.59
ABR-227ENST00000574266 MYT1Q01538 1121 aa24.99■■□□□ 1.59
ABR-227ENST00000574266 FAM83GA6ND36 823 aa24.98■■□□□ 1.59
ABR-227ENST00000574266 SF3B2Q13435 895 aaKnown RBP24.98■■□□□ 1.59
ABR-227ENST00000574266 CCDC61Q9Y6R9 512 aa24.98■■□□□ 1.59
ABR-227ENST00000574266 RALGAPBQ86X10 1494 aa24.96■■□□□ 1.59
ABR-227ENST00000574266 SRPK2P78362 688 aaKnown RBP24.96■■□□□ 1.59
ABR-227ENST00000574266 SEPT12Q8IYM1 358 aa24.95■■□□□ 1.58
ABR-227ENST00000574266 BTG4Q9NY30 223 aa24.95■■□□□ 1.58
ABR-227ENST00000574266 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.95■■□□□ 1.58
ABR-227ENST00000574266 NBPF1Q3BBV0 1214 aa24.94■■□□□ 1.58
ABR-227ENST00000574266 NEUROD1Q13562 356 aa24.93■■□□□ 1.58
ABR-227ENST00000574266 PRDM11Q9NQV5 511 aa24.93■■□□□ 1.58
ABR-227ENST00000574266 CENPJQ9HC77 1338 aaPredicted RBP24.92■■□□□ 1.58
ABR-227ENST00000574266 ZRANB1Q9UGI0 708 aa24.92■■□□□ 1.58
ABR-227ENST00000574266 KIAA1210Q9ULL0 1709 aa24.92■■□□□ 1.58
ABR-227ENST00000574266 NBPF8Q3BBV2 869 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms