RNA–Protein interactions for RNA: ENST00000574257.5

ABR-226, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-226ENST00000574257 ABCC11Q96J66 1382 aa17.48■□□□□ 0.39
ABR-226ENST00000574257 LAMC1P11047 1609 aa17.47■□□□□ 0.39
ABR-226ENST00000574257 ESCO1Q5FWF5 840 aa17.47■□□□□ 0.39
ABR-226ENST00000574257 C8orf37Q96NL8 207 aa17.47■□□□□ 0.39
ABR-226ENST00000574257 PLEKHH1Q9ULM0 1364 aa17.47■□□□□ 0.39
ABR-226ENST00000574257 TECPR2O15040 1411 aa17.47■□□□□ 0.39
ABR-226ENST00000574257 NUTM2FA1L443 756 aa17.46■□□□□ 0.39
ABR-226ENST00000574257 ADAMTS2O95450 1211 aa17.46■□□□□ 0.39
ABR-226ENST00000574257 C14orf93Q9H972 538 aaKnown RBP17.46■□□□□ 0.39
ABR-226ENST00000574257 PIK3C2GO75747 1445 aa17.46■□□□□ 0.39
ABR-226ENST00000574257 RAB3GAP2Q9H2M9 1393 aa17.45■□□□□ 0.38
ABR-226ENST00000574257 CFAP70Q5T0N1 1121 aa17.45■□□□□ 0.38
ABR-226ENST00000574257 ACIN1Q9UKV3 1341 aaKnown RBP17.45■□□□□ 0.38
ABR-226ENST00000574257 QTRT2Q9H974 415 aaKnown RBP17.44■□□□□ 0.38
ABR-226ENST00000574257 FOXO3O43524 673 aa17.43■□□□□ 0.38
ABR-226ENST00000574257 XPCQ01831 940 aaPredicted RBP17.43■□□□□ 0.38
ABR-226ENST00000574257 UPF1Q92900 1129 aaKnown RBP eCLIP17.43■□□□□ 0.38
ABR-226ENST00000574257 NGLY1Q96IV0 654 aa17.43■□□□□ 0.38
ABR-226ENST00000574257 YTHDC2Q9H6S0 1430 aaKnown RBP17.43■□□□□ 0.38
ABR-226ENST00000574257 CDC42BPGQ6DT37 1551 aa17.42■□□□□ 0.38
ABR-226ENST00000574257 SRCAPQ6ZRS2 3230 aa17.42■□□□□ 0.38
ABR-226ENST00000574257 SIRT1Q96EB6 747 aa17.41■□□□□ 0.38
ABR-226ENST00000574257 NRXN1Q9ULB1 1477 aa17.4■□□□□ 0.38
ABR-226ENST00000574257 NPHP3Q7Z494 1330 aa17.4■□□□□ 0.38
ABR-226ENST00000574257 RBM6P78332 1123 aaKnown RBP17.39■□□□□ 0.37
ABR-226ENST00000574257 KNDC1Q76NI1 1749 aa17.38■□□□□ 0.37
ABR-226ENST00000574257 PXDNQ92626 1479 aa17.38■□□□□ 0.37
ABR-226ENST00000574257 CDK12Q9NYV4 1490 aaPredicted RBP17.37■□□□□ 0.37
ABR-226ENST00000574257 FNBP4Q8N3X1 1017 aaPredicted RBP17.37■□□□□ 0.37
ABR-226ENST00000574257 DHX57Q6P158 1386 aaKnown RBP17.37■□□□□ 0.37
ABR-226ENST00000574257 SAFB2Q14151 953 aaKnown RBP eCLIP17.36■□□□□ 0.37
ABR-226ENST00000574257 USP21Q9UK80 565 aa17.36■□□□□ 0.37
ABR-226ENST00000574257 MYOM2P54296 1465 aa17.36■□□□□ 0.37
ABR-226ENST00000574257 PRAM1Q96QH2 718 aa17.35■□□□□ 0.37
ABR-226ENST00000574257 RGS12O14924 1447 aa17.34■□□□□ 0.37
ABR-226ENST00000574257 KRT28Q7Z3Y7 464 aa17.34■□□□□ 0.37
ABR-226ENST00000574257 COL22A1Q8NFW1 1626 aaPredicted RBP17.34■□□□□ 0.37
ABR-226ENST00000574257 FMN2Q9NZ56 1722 aa17.34■□□□□ 0.37
ABR-226ENST00000574257 KDM2AQ9Y2K7 1162 aa17.34■□□□□ 0.37
ABR-226ENST00000574257 RGPD8O14715 1765 aaPredicted RBP17.33■□□□□ 0.37
ABR-226ENST00000574257 HRCP23327 699 aa17.33■□□□□ 0.36
ABR-226ENST00000574257 SPATA31A3Q5VYP0 1347 aa17.32■□□□□ 0.36
ABR-226ENST00000574257 DCAF11Q8TEB1 546 aa17.32■□□□□ 0.36
ABR-226ENST00000574257 TRPC5Q9UL62 973 aaPredicted RBP17.32■□□□□ 0.36
ABR-226ENST00000574257 PHF8Q9UPP1 1060 aa17.31■□□□□ 0.36
ABR-226ENST00000574257 POGKQ9P215 609 aa17.3■□□□□ 0.36
ABR-226ENST00000574257 TRAK1Q9UPV9 953 aa17.3■□□□□ 0.36
ABR-226ENST00000574257 BCL9LQ86UU0 1499 aa17.3■□□□□ 0.36
ABR-226ENST00000574257 ATRNO75882 1429 aa17.3■□□□□ 0.36
ABR-226ENST00000574257 ADGRB1O14514 1584 aa17.28■□□□□ 0.36
ABR-226ENST00000574257 PMFBP1Q8TBY8 1022 aa17.27■□□□□ 0.36
ABR-226ENST00000574257 HIRIP3Q9BW71 556 aaPredicted RBP17.27■□□□□ 0.36
ABR-226ENST00000574257 DLC1Q96QB1 1528 aa17.26■□□□□ 0.35
ABR-226ENST00000574257 CABLES1Q8TDN4 633 aa17.26■□□□□ 0.35
ABR-226ENST00000574257 KIF1AQ12756 1690 aa17.26■□□□□ 0.35
ABR-226ENST00000574257 MARF1Q9Y4F3 1742 aaKnown RBP17.25■□□□□ 0.35
ABR-226ENST00000574257 PSME1Q06323 249 aa17.25■□□□□ 0.35
ABR-226ENST00000574257 MINK1Q8N4C8 1332 aaPredicted RBP17.24■□□□□ 0.35
ABR-226ENST00000574257 PLEKHG5O94827 1062 aa17.24■□□□□ 0.35
ABR-226ENST00000574257 GJD4Q96KN9 370 aaPredicted RBP17.24■□□□□ 0.35
ABR-226ENST00000574257 PRR36Q9H6K5 1346 aa17.23■□□□□ 0.35
ABR-226ENST00000574257 USP32Q8NFA0 1604 aa17.23■□□□□ 0.35
ABR-226ENST00000574257 STAC3Q96MF2 364 aa17.23■□□□□ 0.35
ABR-226ENST00000574257 UNC5CLQ8IV45 518 aa17.22■□□□□ 0.35
ABR-226ENST00000574257 EP400Q96L91 3159 aa17.22■□□□□ 0.35
ABR-226ENST00000574257 TNS3Q68CZ2 1445 aa17.21■□□□□ 0.35
ABR-226ENST00000574257 SLIT2O94813 1529 aa17.21■□□□□ 0.35
ABR-226ENST00000574257 SBNO1A3KN83 1393 aa17.21■□□□□ 0.35
ABR-226ENST00000574257 WASLO00401 505 aaPredicted RBP17.21■□□□□ 0.35
ABR-226ENST00000574257 LMOD2Q6P5Q4 547 aa17.21■□□□□ 0.35
ABR-226ENST00000574257 ANKARQ7Z5J8 1434 aa17.21■□□□□ 0.34
ABR-226ENST00000574257 ADGRB2O60241 1585 aa17.19■□□□□ 0.34
ABR-226ENST00000574257 ATAD2Q6PL18 1390 aa17.18■□□□□ 0.34
ABR-226ENST00000574257 FAM83GA6ND36 823 aa17.18■□□□□ 0.34
ABR-226ENST00000574257 HAP1P54257 671 aaPredicted RBP17.17■□□□□ 0.34
ABR-226ENST00000574257 RALGAPBQ86X10 1494 aa17.17■□□□□ 0.34
ABR-226ENST00000574257 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.16■□□□□ 0.34
ABR-226ENST00000574257 ARHGEF10O15013 1369 aa17.15■□□□□ 0.34
ABR-226ENST00000574257 GLI3P10071 1580 aa17.15■□□□□ 0.34
ABR-226ENST00000574257 NBPF1Q3BBV0 1214 aa17.15■□□□□ 0.34
ABR-226ENST00000574257 VPS72Q15906 364 aa17.14■□□□□ 0.33
ABR-226ENST00000574257 NUDT16Q96DE0 195 aaKnown RBP17.14■□□□□ 0.33
ABR-226ENST00000574257 TRPM3Q9HCF6 1732 aaPredicted RBP17.13■□□□□ 0.33
ABR-226ENST00000574257 TULP4Q9NRJ4 1543 aa17.13■□□□□ 0.33
ABR-226ENST00000574257 NGDNQ8NEJ9 315 aaKnown RBP17.13■□□□□ 0.33
ABR-226ENST00000574257 CDK19Q9BWU1 502 aa17.13■□□□□ 0.33
ABR-226ENST00000574257 GPRASP1Q5JY77 1395 aa17.13■□□□□ 0.33
ABR-226ENST00000574257 ONECUT3O60422 494 aaPredicted RBP17.12■□□□□ 0.33
ABR-226ENST00000574257 ARHGEF28Q8N1W1 1705 aaKnown RBP17.12■□□□□ 0.33
ABR-226ENST00000574257 ABCA3Q99758 1704 aa17.12■□□□□ 0.33
ABR-226ENST00000574257 EIF3AQ14152 1382 aaKnown RBP17.12■□□□□ 0.33
ABR-226ENST00000574257 SEPT12Q8IYM1 358 aa17.11■□□□□ 0.33
ABR-226ENST00000574257 ALS2Q96Q42 1657 aa17.1■□□□□ 0.33
ABR-226ENST00000574257 BRWD3Q6RI45 1802 aa17.1■□□□□ 0.33
ABR-226ENST00000574257 PAK3O75914 559 aaPredicted RBP17.1■□□□□ 0.33
ABR-226ENST00000574257 BTG4Q9NY30 223 aa17.09■□□□□ 0.33
ABR-226ENST00000574257 CCDC9Q9Y3X0 531 aaKnown RBP17.09■□□□□ 0.33
ABR-226ENST00000574257 PLCH1Q4KWH8 1693 aa17.09■□□□□ 0.33
ABR-226ENST00000574257 NWD2Q9ULI1 1742 aa17.08■□□□□ 0.32
ABR-226ENST00000574257 ATP7BP35670 1465 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms