RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 MYOM2P54296 1465 aa28.72■■■□□ 2.19
HCFC1R1-204ENST00000573095 NRXN1Q9ULB1 1477 aa28.72■■■□□ 2.19
HCFC1R1-204ENST00000573095 SOS2Q07890 1332 aaPredicted RBP28.71■■■□□ 2.19
HCFC1R1-204ENST00000573095 ORAI2Q96SN7 254 aa28.71■■■□□ 2.19
HCFC1R1-204ENST00000573095 ABCC11Q96J66 1382 aa28.71■■■□□ 2.19
HCFC1R1-204ENST00000573095 COL22A1Q8NFW1 1626 aaPredicted RBP28.69■■■□□ 2.18
HCFC1R1-204ENST00000573095 YTHDC2Q9H6S0 1430 aaKnown RBP28.68■■■□□ 2.18
HCFC1R1-204ENST00000573095 FMN2Q9NZ56 1722 aa28.67■■■□□ 2.18
HCFC1R1-204ENST00000573095 AFF2P51816 1311 aa28.67■■■□□ 2.18
HCFC1R1-204ENST00000573095 CDK12Q9NYV4 1490 aaPredicted RBP28.66■■■□□ 2.18
HCFC1R1-204ENST00000573095 STK26Q9P289 416 aa28.65■■■□□ 2.18
HCFC1R1-204ENST00000573095 PLEKHH1Q9ULM0 1364 aa28.63■■■□□ 2.17
HCFC1R1-204ENST00000573095 TMEM132EQ6IEE7 984 aa28.63■■■□□ 2.17
HCFC1R1-204ENST00000573095 PXDNQ92626 1479 aa28.63■■■□□ 2.17
HCFC1R1-204ENST00000573095 WAPLQ7Z5K2 1190 aa28.62■■■□□ 2.17
HCFC1R1-204ENST00000573095 NPHP3Q7Z494 1330 aa28.62■■■□□ 2.17
HCFC1R1-204ENST00000573095 KIF1AQ12756 1690 aa28.61■■■□□ 2.17
HCFC1R1-204ENST00000573095 C14orf93Q9H972 538 aaKnown RBP28.6■■■□□ 2.17
HCFC1R1-204ENST00000573095 RXRBP28702 533 aa28.59■■■□□ 2.17
HCFC1R1-204ENST00000573095 C8orf37Q96NL8 207 aa28.59■■■□□ 2.17
HCFC1R1-204ENST00000573095 ESCO1Q5FWF5 840 aa28.58■■■□□ 2.17
HCFC1R1-204ENST00000573095 SIRT1Q96EB6 747 aa28.57■■■□□ 2.16
HCFC1R1-204ENST00000573095 MARF1Q9Y4F3 1742 aaKnown RBP28.55■■■□□ 2.16
HCFC1R1-204ENST00000573095 DLC1Q96QB1 1528 aa28.54■■■□□ 2.16
HCFC1R1-204ENST00000573095 DHX57Q6P158 1386 aaKnown RBP28.54■■■□□ 2.16
HCFC1R1-204ENST00000573095 ADAMTS2O95450 1211 aa28.52■■■□□ 2.16
HCFC1R1-204ENST00000573095 CFAP70Q5T0N1 1121 aa28.52■■■□□ 2.16
HCFC1R1-204ENST00000573095 ADGRB1O14514 1584 aa28.52■■■□□ 2.16
HCFC1R1-204ENST00000573095 RGPD8O14715 1765 aaPredicted RBP28.51■■■□□ 2.15
HCFC1R1-204ENST00000573095 RGS12O14924 1447 aa28.51■■■□□ 2.15
HCFC1R1-204ENST00000573095 ADGRB2O60241 1585 aa28.5■■■□□ 2.15
HCFC1R1-204ENST00000573095 NUTM2FA1L443 756 aa28.49■■■□□ 2.15
HCFC1R1-204ENST00000573095 FOXO3O43524 673 aa28.49■■■□□ 2.15
HCFC1R1-204ENST00000573095 NGLY1Q96IV0 654 aa28.49■■■□□ 2.15
HCFC1R1-204ENST00000573095 RBM6P78332 1123 aaKnown RBP28.48■■■□□ 2.15
HCFC1R1-204ENST00000573095 HRCP23327 699 aa28.47■■■□□ 2.15
HCFC1R1-204ENST00000573095 QTRT2Q9H974 415 aaKnown RBP28.47■■■□□ 2.15
HCFC1R1-204ENST00000573095 UPF1Q92900 1129 aaKnown RBP eCLIP28.46■■■□□ 2.15
HCFC1R1-204ENST00000573095 XPCQ01831 940 aaPredicted RBP28.45■■■□□ 2.14
HCFC1R1-204ENST00000573095 FNBP4Q8N3X1 1017 aaPredicted RBP28.44■■■□□ 2.14
HCFC1R1-204ENST00000573095 PRAM1Q96QH2 718 aa28.43■■■□□ 2.14
HCFC1R1-204ENST00000573095 USP32Q8NFA0 1604 aa28.43■■■□□ 2.14
HCFC1R1-204ENST00000573095 USP21Q9UK80 565 aa28.42■■■□□ 2.14
HCFC1R1-204ENST00000573095 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.41■■■□□ 2.14
HCFC1R1-204ENST00000573095 ATRNO75882 1429 aa28.41■■■□□ 2.14
HCFC1R1-204ENST00000573095 ANKARQ7Z5J8 1434 aa28.4■■■□□ 2.14
HCFC1R1-204ENST00000573095 SPATA31A3Q5VYP0 1347 aa28.4■■■□□ 2.14
HCFC1R1-204ENST00000573095 TNS3Q68CZ2 1445 aa28.38■■■□□ 2.13
HCFC1R1-204ENST00000573095 STAC3Q96MF2 364 aa28.38■■■□□ 2.13
HCFC1R1-204ENST00000573095 TRPC5Q9UL62 973 aaPredicted RBP28.38■■■□□ 2.13
HCFC1R1-204ENST00000573095 PHF8Q9UPP1 1060 aa28.37■■■□□ 2.13
HCFC1R1-204ENST00000573095 BCL9LQ86UU0 1499 aa28.37■■■□□ 2.13
HCFC1R1-204ENST00000573095 ABCA3Q99758 1704 aa28.37■■■□□ 2.13
HCFC1R1-204ENST00000573095 SAFB2Q14151 953 aaKnown RBP eCLIP28.36■■■□□ 2.13
HCFC1R1-204ENST00000573095 ARHGEF28Q8N1W1 1705 aaKnown RBP28.35■■■□□ 2.13
HCFC1R1-204ENST00000573095 DCAF11Q8TEB1 546 aa28.35■■■□□ 2.13
HCFC1R1-204ENST00000573095 POGKQ9P215 609 aa28.35■■■□□ 2.13
HCFC1R1-204ENST00000573095 KRT28Q7Z3Y7 464 aa28.34■■■□□ 2.13
HCFC1R1-204ENST00000573095 KDM2AQ9Y2K7 1162 aa28.32■■■□□ 2.12
HCFC1R1-204ENST00000573095 SBNO1A3KN83 1393 aa28.32■■■□□ 2.12
HCFC1R1-204ENST00000573095 TULP4Q9NRJ4 1543 aa28.32■■■□□ 2.12
HCFC1R1-204ENST00000573095 TRAK1Q9UPV9 953 aa28.31■■■□□ 2.12
HCFC1R1-204ENST00000573095 EIF3AQ14152 1382 aaKnown RBP28.31■■■□□ 2.12
HCFC1R1-204ENST00000573095 SLIT2O94813 1529 aa28.31■■■□□ 2.12
HCFC1R1-204ENST00000573095 TRPM3Q9HCF6 1732 aaPredicted RBP28.31■■■□□ 2.12
HCFC1R1-204ENST00000573095 PSME1Q06323 249 aa28.29■■■□□ 2.12
HCFC1R1-204ENST00000573095 KIAA1210Q9ULL0 1709 aa28.29■■■□□ 2.12
HCFC1R1-204ENST00000573095 PLCH1Q4KWH8 1693 aa28.27■■■□□ 2.12
HCFC1R1-204ENST00000573095 NWD2Q9ULI1 1742 aa28.26■■■□□ 2.12
HCFC1R1-204ENST00000573095 ARHGEF10O15013 1369 aa28.26■■■□□ 2.12
HCFC1R1-204ENST00000573095 ATAD2Q6PL18 1390 aa28.26■■■□□ 2.12
HCFC1R1-204ENST00000573095 ITSN1Q15811 1721 aa28.26■■■□□ 2.11
HCFC1R1-204ENST00000573095 ALS2Q96Q42 1657 aa28.26■■■□□ 2.11
HCFC1R1-204ENST00000573095 HIRIP3Q9BW71 556 aaPredicted RBP28.24■■■□□ 2.11
HCFC1R1-204ENST00000573095 GLI3P10071 1580 aa28.24■■■□□ 2.11
HCFC1R1-204ENST00000573095 MINK1Q8N4C8 1332 aaPredicted RBP28.23■■■□□ 2.11
HCFC1R1-204ENST00000573095 PRR36Q9H6K5 1346 aa28.22■■■□□ 2.11
HCFC1R1-204ENST00000573095 UNC5CLQ8IV45 518 aa28.21■■■□□ 2.11
HCFC1R1-204ENST00000573095 PMFBP1Q8TBY8 1022 aa28.21■■■□□ 2.11
HCFC1R1-204ENST00000573095 GJD4Q96KN9 370 aaPredicted RBP28.21■■■□□ 2.11
HCFC1R1-204ENST00000573095 RALGAPBQ86X10 1494 aa28.21■■■□□ 2.11
HCFC1R1-204ENST00000573095 WASLO00401 505 aaPredicted RBP28.2■■■□□ 2.1
HCFC1R1-204ENST00000573095 ATP7BP35670 1465 aa28.19■■■□□ 2.1
HCFC1R1-204ENST00000573095 HAP1P54257 671 aaPredicted RBP28.18■■■□□ 2.1
HCFC1R1-204ENST00000573095 CRYBG1Q9Y4K1 1723 aa28.18■■■□□ 2.1
HCFC1R1-204ENST00000573095 GPRASP1Q5JY77 1395 aa28.17■■■□□ 2.1
HCFC1R1-204ENST00000573095 CABLES1Q8TDN4 633 aa28.17■■■□□ 2.1
HCFC1R1-204ENST00000573095 TOPAZ1Q8N9V7 1692 aa28.16■■■□□ 2.1
HCFC1R1-204ENST00000573095 NRAPQ86VF7 1730 aa28.15■■■□□ 2.1
HCFC1R1-204ENST00000573095 LMOD2Q6P5Q4 547 aa28.15■■■□□ 2.1
HCFC1R1-204ENST00000573095 BRWD3Q6RI45 1802 aa28.12■■■□□ 2.09
HCFC1R1-204ENST00000573095 COL14A1Q05707 1796 aaKnown RBP28.11■■■□□ 2.09
HCFC1R1-204ENST00000573095 EP400Q96L91 3159 aa28.09■■■□□ 2.09
HCFC1R1-204ENST00000573095 VPS72Q15906 364 aa28.09■■■□□ 2.09
HCFC1R1-204ENST00000573095 PLEKHG5O94827 1062 aa28.08■■■□□ 2.09
HCFC1R1-204ENST00000573095 NGDNQ8NEJ9 315 aaKnown RBP28.07■■■□□ 2.08
HCFC1R1-204ENST00000573095 NUDT16Q96DE0 195 aaKnown RBP28.05■■■□□ 2.08
HCFC1R1-204ENST00000573095 PHRF1Q9P1Y6 1649 aaKnown RBP28.05■■■□□ 2.08
HCFC1R1-204ENST00000573095 FAM83GA6ND36 823 aa28.03■■■□□ 2.08
HCFC1R1-204ENST00000573095 POLR3AO14802 1390 aaPredicted RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms