RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 MAGI2Q86UL8 1455 aa20.66■□□□□ 0.9
RAB40B-206ENST00000571995 FOXD4L1Q9NU39 408 aa20.66■□□□□ 0.9
RAB40B-206ENST00000571995 ZRANB1Q9UGI0 708 aa20.66■□□□□ 0.9
RAB40B-206ENST00000571995 CHD1O14646 1710 aa20.65■□□□□ 0.9
RAB40B-206ENST00000571995 IGHDP01880 384 aa20.65■□□□□ 0.9
RAB40B-206ENST00000571995 DCTN1Q14203 1278 aa20.65■□□□□ 0.9
RAB40B-206ENST00000571995 FAM161AQ3B820 660 aa20.65■□□□□ 0.9
RAB40B-206ENST00000571995 C14orf93Q9H972 538 aaKnown RBP20.65■□□□□ 0.9
RAB40B-206ENST00000571995 COL17A1Q9UMD9 1497 aaPredicted RBP20.64■□□□□ 0.9
RAB40B-206ENST00000571995 ADGBQ8N7X0 1667 aa20.63■□□□□ 0.89
RAB40B-206ENST00000571995 COG3Q96JB2 828 aa20.61■□□□□ 0.89
RAB40B-206ENST00000571995 STAC3Q96MF2 364 aa20.61■□□□□ 0.89
RAB40B-206ENST00000571995 ZKSCAN2Q63HK3 967 aa20.6■□□□□ 0.89
RAB40B-206ENST00000571995 EMILIN1Q9Y6C2 1016 aa20.6■□□□□ 0.89
RAB40B-206ENST00000571995 NME9Q86XW9 330 aa20.6■□□□□ 0.89
RAB40B-206ENST00000571995 GZF1Q9H116 711 aaPredicted RBP20.6■□□□□ 0.89
RAB40B-206ENST00000571995 LNPKQ9C0E8 428 aa20.59■□□□□ 0.89
RAB40B-206ENST00000571995 RWDD1Q9H446 243 aaPredicted RBP20.59■□□□□ 0.89
RAB40B-206ENST00000571995 DZIP1LQ8IYY4 767 aaKnown RBP20.59■□□□□ 0.89
RAB40B-206ENST00000571995 RLBP1P12271 317 aa20.58■□□□□ 0.89
RAB40B-206ENST00000571995 AMPHP49418 695 aa20.58■□□□□ 0.89
RAB40B-206ENST00000571995 MIS18AQ9NYP9 233 aa20.57■□□□□ 0.88
RAB40B-206ENST00000571995 ATP10AO60312 1499 aa20.57■□□□□ 0.88
RAB40B-206ENST00000571995 NOB1Q9ULX3 412 aaKnown RBP20.56■□□□□ 0.88
RAB40B-206ENST00000571995 GPRASP1Q5JY77 1395 aa20.56■□□□□ 0.88
RAB40B-206ENST00000571995 RARSP54136 660 aaKnown RBP20.55■□□□□ 0.88
RAB40B-206ENST00000571995 SLC52A1Q9NWF4 448 aa20.55■□□□□ 0.88
RAB40B-206ENST00000571995 PDZRN3Q9UPQ7 1066 aa20.55■□□□□ 0.88
RAB40B-206ENST00000571995 MS4A1P11836 297 aa20.54■□□□□ 0.88
RAB40B-206ENST00000571995 KDM5DQ9BY66 1539 aa20.54■□□□□ 0.88
RAB40B-206ENST00000571995 HDGFP51858 240 aaKnown RBP20.54■□□□□ 0.88
RAB40B-206ENST00000571995 ANKRD45Q5TZF3 282 aa20.54■□□□□ 0.88
RAB40B-206ENST00000571995 BECN1Q14457 450 aa20.53■□□□□ 0.88
RAB40B-206ENST00000571995 TMPOP42166 694 aaKnown RBP20.53■□□□□ 0.88
RAB40B-206ENST00000571995 RTF1Q92541 710 aaKnown RBP20.53■□□□□ 0.88
RAB40B-206ENST00000571995 EID1Q9Y6B2 187 aa20.53■□□□□ 0.88
RAB40B-206ENST00000571995 XPCQ01831 940 aaPredicted RBP20.53■□□□□ 0.88
RAB40B-206ENST00000571995 CDC42BPBQ9Y5S2 1711 aa20.53■□□□□ 0.88
RAB40B-206ENST00000571995 RNF123Q5XPI4 1314 aa20.53■□□□□ 0.88
RAB40B-206ENST00000571995 ARHGEF5Q12774 1597 aa20.52■□□□□ 0.88
RAB40B-206ENST00000571995 FAM83GA6ND36 823 aa20.52■□□□□ 0.88
RAB40B-206ENST00000571995 FYB1O15117 783 aa20.52■□□□□ 0.88
RAB40B-206ENST00000571995 SSH1Q8WYL5 1049 aa20.52■□□□□ 0.88
RAB40B-206ENST00000571995 PCDHB15Q9Y5E8 787 aa20.51■□□□□ 0.87
RAB40B-206ENST00000571995 SULT6B1Q6IMI4 303 aa20.5■□□□□ 0.87
RAB40B-206ENST00000571995 PREX2Q70Z35 1606 aa20.5■□□□□ 0.87
RAB40B-206ENST00000571995 MAST1Q9Y2H9 1570 aa20.5■□□□□ 0.87
RAB40B-206ENST00000571995 ATP7AQ04656 1500 aa20.49■□□□□ 0.87
RAB40B-206ENST00000571995 IPO8O15397 1037 aaKnown RBP20.49■□□□□ 0.87
RAB40B-206ENST00000571995 ASXL1Q8IXJ9 1541 aa20.48■□□□□ 0.87
RAB40B-206ENST00000571995 PNNQ9H307 717 aaKnown RBP20.48■□□□□ 0.87
RAB40B-206ENST00000571995 SEC24BO95487 1268 aa20.47■□□□□ 0.87
RAB40B-206ENST00000571995 NPATQ14207 1427 aa20.46■□□□□ 0.87
RAB40B-206ENST00000571995 FRAT2O75474 233 aaPredicted RBP20.46■□□□□ 0.87
RAB40B-206ENST00000571995 TMEM57Q8N5G2 664 aa20.46■□□□□ 0.87
RAB40B-206ENST00000571995 NUDT16Q96DE0 195 aaKnown RBP20.46■□□□□ 0.87
RAB40B-206ENST00000571995 NLRP6P59044 892 aa20.46■□□□□ 0.87
RAB40B-206ENST00000571995 MYO5CQ9NQX4 1742 aa20.45■□□□□ 0.86
RAB40B-206ENST00000571995 ZCCHC11Q5TAX3 1644 aaKnown RBP20.45■□□□□ 0.86
RAB40B-206ENST00000571995 NOL8Q76FK4 1167 aaKnown RBP20.45■□□□□ 0.86
RAB40B-206ENST00000571995 EIF2S2P20042 333 aaKnown RBP20.44■□□□□ 0.86
RAB40B-206ENST00000571995 NFKBIBQ15653 356 aa20.44■□□□□ 0.86
RAB40B-206ENST00000571995 MCM10Q7L590 875 aa20.44■□□□□ 0.86
RAB40B-206ENST00000571995 EIF5BO60841 1220 aaKnown RBP20.44■□□□□ 0.86
RAB40B-206ENST00000571995 YEATS2Q9ULM3 1422 aa20.44■□□□□ 0.86
RAB40B-206ENST00000571995 PHACTR3Q96KR7 559 aa20.43■□□□□ 0.86
RAB40B-206ENST00000571995 NKTRP30414 1462 aaKnown RBP20.43■□□□□ 0.86
RAB40B-206ENST00000571995 ADCY10Q96PN6 1610 aa20.43■□□□□ 0.86
RAB40B-206ENST00000571995 ZNF518AQ6AHZ1 1483 aa20.43■□□□□ 0.86
RAB40B-206ENST00000571995 PDE3AQ14432 1141 aa20.43■□□□□ 0.86
RAB40B-206ENST00000571995 TAOK2Q9UL54 1235 aa20.43■□□□□ 0.86
RAB40B-206ENST00000571995 NCLP19338 710 aaKnown RBP20.42■□□□□ 0.86
RAB40B-206ENST00000571995 RPGRIP1LQ68CZ1 1315 aa20.42■□□□□ 0.86
RAB40B-206ENST00000571995 ABCC1P33527 1531 aa20.42■□□□□ 0.86
RAB40B-206ENST00000571995 TRIM27P14373 513 aa20.42■□□□□ 0.86
RAB40B-206ENST00000571995 KRT24Q2M2I5 525 aa20.42■□□□□ 0.86
RAB40B-206ENST00000571995 RTEL1-TNFRSF6BF6WH68 1400 aa20.41■□□□□ 0.86
RAB40B-206ENST00000571995 HAP1P54257 671 aaPredicted RBP20.41■□□□□ 0.86
RAB40B-206ENST00000571995 A0A1W2PP64 1363 aa20.4■□□□□ 0.86
RAB40B-206ENST00000571995 CROCC2H7BZ55 1655 aa20.39■□□□□ 0.86
RAB40B-206ENST00000571995 HSP90AB1P08238 724 aaKnown RBP20.39■□□□□ 0.86
RAB40B-206ENST00000571995 AEBP1Q8IUX7 1158 aa20.39■□□□□ 0.86
RAB40B-206ENST00000571995 MVPQ14764 893 aaKnown RBP20.39■□□□□ 0.85
RAB40B-206ENST00000571995 FOXD4L5Q5VV16 416 aaPredicted RBP20.39■□□□□ 0.85
RAB40B-206ENST00000571995 WDR63Q8IWG1 891 aa20.39■□□□□ 0.85
RAB40B-206ENST00000571995 USHBP1Q8N6Y0 703 aa20.39■□□□□ 0.85
RAB40B-206ENST00000571995 FOXD4L4Q8WXT5 416 aaPredicted RBP20.39■□□□□ 0.85
RAB40B-206ENST00000571995 ATF7IPQ6VMQ6 1270 aa20.38■□□□□ 0.85
RAB40B-206ENST00000571995 NGEFQ8N5V2 710 aa20.38■□□□□ 0.85
RAB40B-206ENST00000571995 PRDM15P57071 1507 aaPredicted RBP20.38■□□□□ 0.85
RAB40B-206ENST00000571995 TSPYL6Q8N831 410 aa20.37■□□□□ 0.85
RAB40B-206ENST00000571995 DDX19BQ9UMR2 479 aa20.37■□□□□ 0.85
RAB40B-206ENST00000571995 ZNF330Q9Y3S2 320 aaPredicted RBP20.37■□□□□ 0.85
RAB40B-206ENST00000571995 IL27Q8NEV9 243 aa20.36■□□□□ 0.85
RAB40B-206ENST00000571995 CCDC61Q9Y6R9 512 aa20.36■□□□□ 0.85
RAB40B-206ENST00000571995 ERVK-7P63135 1459 aa20.36■□□□□ 0.85
RAB40B-206ENST00000571995 TWISTNBQ3B726 338 aaPredicted RBP20.36■□□□□ 0.85
RAB40B-206ENST00000571995 C8orf34Q49A92 452 aa20.36■□□□□ 0.85
RAB40B-206ENST00000571995 ABTB2Q8N961 1025 aa20.35■□□□□ 0.85
RAB40B-206ENST00000571995 OS9Q13438 667 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms