RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 TMEM132EQ6IEE7 984 aa22.01■■□□□ 1.11
NDE1-203ENST00000570727 LRPPRCP42704 1394 aaKnown RBP22■■□□□ 1.11
NDE1-203ENST00000570727 UPF1Q92900 1129 aaKnown RBP eCLIP22■■□□□ 1.11
NDE1-203ENST00000570727 ABCC11Q96J66 1382 aa21.99■■□□□ 1.11
NDE1-203ENST00000570727 TECPR2O15040 1411 aa21.99■■□□□ 1.11
NDE1-203ENST00000570727 ADAMTS2O95450 1211 aa21.98■■□□□ 1.11
NDE1-203ENST00000570727 ESCO1Q5FWF5 840 aa21.98■■□□□ 1.11
NDE1-203ENST00000570727 QTRT2Q9H974 415 aaKnown RBP21.98■■□□□ 1.11
NDE1-203ENST00000570727 CDC42BPGQ6DT37 1551 aa21.98■■□□□ 1.11
NDE1-203ENST00000570727 PIK3C2GO75747 1445 aa21.97■■□□□ 1.11
NDE1-203ENST00000570727 CDK12Q9NYV4 1490 aaPredicted RBP21.97■■□□□ 1.11
NDE1-203ENST00000570727 ACIN1Q9UKV3 1341 aaKnown RBP21.97■■□□□ 1.11
NDE1-203ENST00000570727 NGLY1Q96IV0 654 aa21.96■■□□□ 1.11
NDE1-203ENST00000570727 PLEKHH1Q9ULM0 1364 aa21.96■■□□□ 1.11
NDE1-203ENST00000570727 NUTM2FA1L443 756 aa21.94■■□□□ 1.1
NDE1-203ENST00000570727 FOXO3O43524 673 aa21.94■■□□□ 1.1
NDE1-203ENST00000570727 C14orf93Q9H972 538 aaKnown RBP21.94■■□□□ 1.1
NDE1-203ENST00000570727 KNDC1Q76NI1 1749 aa21.94■■□□□ 1.1
NDE1-203ENST00000570727 RBM6P78332 1123 aaKnown RBP21.93■■□□□ 1.1
NDE1-203ENST00000570727 NPHP3Q7Z494 1330 aa21.93■■□□□ 1.1
NDE1-203ENST00000570727 YTHDC2Q9H6S0 1430 aaKnown RBP21.93■■□□□ 1.1
NDE1-203ENST00000570727 COL22A1Q8NFW1 1626 aaPredicted RBP21.92■■□□□ 1.1
NDE1-203ENST00000570727 PXDNQ92626 1479 aa21.92■■□□□ 1.1
NDE1-203ENST00000570727 SIRT1Q96EB6 747 aa21.92■■□□□ 1.1
NDE1-203ENST00000570727 XPCQ01831 940 aaPredicted RBP21.91■■□□□ 1.1
NDE1-203ENST00000570727 RAB3GAP2Q9H2M9 1393 aa21.9■■□□□ 1.1
NDE1-203ENST00000570727 CFAP70Q5T0N1 1121 aa21.9■■□□□ 1.1
NDE1-203ENST00000570727 FNBP4Q8N3X1 1017 aaPredicted RBP21.9■■□□□ 1.1
NDE1-203ENST00000570727 NRXN1Q9ULB1 1477 aa21.9■■□□□ 1.1
NDE1-203ENST00000570727 RGS12O14924 1447 aa21.89■■□□□ 1.09
NDE1-203ENST00000570727 USP21Q9UK80 565 aa21.88■■□□□ 1.09
NDE1-203ENST00000570727 MYOM2P54296 1465 aa21.88■■□□□ 1.09
NDE1-203ENST00000570727 FMN2Q9NZ56 1722 aa21.87■■□□□ 1.09
NDE1-203ENST00000570727 DHX57Q6P158 1386 aaKnown RBP21.86■■□□□ 1.09
NDE1-203ENST00000570727 RGPD8O14715 1765 aaPredicted RBP21.84■■□□□ 1.09
NDE1-203ENST00000570727 TRPC5Q9UL62 973 aaPredicted RBP21.84■■□□□ 1.09
NDE1-203ENST00000570727 MARF1Q9Y4F3 1742 aaKnown RBP21.82■■□□□ 1.08
NDE1-203ENST00000570727 SPATA31A3Q5VYP0 1347 aa21.81■■□□□ 1.08
NDE1-203ENST00000570727 ATRNO75882 1429 aa21.81■■□□□ 1.08
NDE1-203ENST00000570727 KRT28Q7Z3Y7 464 aa21.81■■□□□ 1.08
NDE1-203ENST00000570727 PRAM1Q96QH2 718 aa21.81■■□□□ 1.08
NDE1-203ENST00000570727 BCL9LQ86UU0 1499 aa21.8■■□□□ 1.08
NDE1-203ENST00000570727 KIF1AQ12756 1690 aa21.79■■□□□ 1.08
NDE1-203ENST00000570727 SAFB2Q14151 953 aaKnown RBP eCLIP21.79■■□□□ 1.08
NDE1-203ENST00000570727 PHF8Q9UPP1 1060 aa21.78■■□□□ 1.08
NDE1-203ENST00000570727 HRCP23327 699 aa21.76■■□□□ 1.07
NDE1-203ENST00000570727 DLC1Q96QB1 1528 aa21.75■■□□□ 1.07
NDE1-203ENST00000570727 ADGRB1O14514 1584 aa21.75■■□□□ 1.07
NDE1-203ENST00000570727 POGKQ9P215 609 aa21.75■■□□□ 1.07
NDE1-203ENST00000570727 KDM2AQ9Y2K7 1162 aa21.75■■□□□ 1.07
NDE1-203ENST00000570727 EP400Q96L91 3159 aa21.75■■□□□ 1.07
NDE1-203ENST00000570727 DCAF11Q8TEB1 546 aa21.74■■□□□ 1.07
NDE1-203ENST00000570727 TRAK1Q9UPV9 953 aa21.74■■□□□ 1.07
NDE1-203ENST00000570727 PSME1Q06323 249 aa21.73■■□□□ 1.07
NDE1-203ENST00000570727 GJD4Q96KN9 370 aaPredicted RBP21.73■■□□□ 1.07
NDE1-203ENST00000570727 USP32Q8NFA0 1604 aa21.71■■□□□ 1.07
NDE1-203ENST00000570727 UNC5CLQ8IV45 518 aa21.71■■□□□ 1.07
NDE1-203ENST00000570727 CABLES1Q8TDN4 633 aa21.71■■□□□ 1.07
NDE1-203ENST00000570727 ATAD2Q6PL18 1390 aa21.71■■□□□ 1.07
NDE1-203ENST00000570727 SLIT2O94813 1529 aa21.7■■□□□ 1.07
NDE1-203ENST00000570727 PMFBP1Q8TBY8 1022 aa21.7■■□□□ 1.06
NDE1-203ENST00000570727 STAC3Q96MF2 364 aa21.7■■□□□ 1.06
NDE1-203ENST00000570727 SBNO1A3KN83 1393 aa21.7■■□□□ 1.06
NDE1-203ENST00000570727 TNS3Q68CZ2 1445 aa21.7■■□□□ 1.06
NDE1-203ENST00000570727 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.69■■□□□ 1.06
NDE1-203ENST00000570727 HIRIP3Q9BW71 556 aaPredicted RBP21.69■■□□□ 1.06
NDE1-203ENST00000570727 ANKARQ7Z5J8 1434 aa21.69■■□□□ 1.06
NDE1-203ENST00000570727 ADGRB2O60241 1585 aa21.68■■□□□ 1.06
NDE1-203ENST00000570727 MINK1Q8N4C8 1332 aaPredicted RBP21.67■■□□□ 1.06
NDE1-203ENST00000570727 PRR36Q9H6K5 1346 aa21.65■■□□□ 1.06
NDE1-203ENST00000570727 PLEKHG5O94827 1062 aa21.65■■□□□ 1.06
NDE1-203ENST00000570727 LMOD2Q6P5Q4 547 aa21.65■■□□□ 1.06
NDE1-203ENST00000570727 GLI3P10071 1580 aa21.65■■□□□ 1.06
NDE1-203ENST00000570727 RALGAPBQ86X10 1494 aa21.64■■□□□ 1.06
NDE1-203ENST00000570727 HAP1P54257 671 aaPredicted RBP21.64■■□□□ 1.05
NDE1-203ENST00000570727 ARHGEF10O15013 1369 aa21.63■■□□□ 1.05
NDE1-203ENST00000570727 WASLO00401 505 aaPredicted RBP21.63■■□□□ 1.05
NDE1-203ENST00000570727 FAM83GA6ND36 823 aa21.62■■□□□ 1.05
NDE1-203ENST00000570727 ABCA3Q99758 1704 aa21.62■■□□□ 1.05
NDE1-203ENST00000570727 SRCAPQ6ZRS2 3230 aa21.62■■□□□ 1.05
NDE1-203ENST00000570727 TRPM3Q9HCF6 1732 aaPredicted RBP21.61■■□□□ 1.05
NDE1-203ENST00000570727 VPS72Q15906 364 aa21.6■■□□□ 1.05
NDE1-203ENST00000570727 TULP4Q9NRJ4 1543 aa21.6■■□□□ 1.05
NDE1-203ENST00000570727 CCDC125Q86Z20 511 aa21.59■■□□□ 1.05
NDE1-203ENST00000570727 BRWD3Q6RI45 1802 aa21.59■■□□□ 1.05
NDE1-203ENST00000570727 EIF3AQ14152 1382 aaKnown RBP21.59■■□□□ 1.05
NDE1-203ENST00000570727 NWD2Q9ULI1 1742 aa21.58■■□□□ 1.05
NDE1-203ENST00000570727 PLCH1Q4KWH8 1693 aa21.58■■□□□ 1.05
NDE1-203ENST00000570727 ARHGEF28Q8N1W1 1705 aaKnown RBP21.58■■□□□ 1.04
NDE1-203ENST00000570727 ALS2Q96Q42 1657 aa21.57■■□□□ 1.04
NDE1-203ENST00000570727 ONECUT3O60422 494 aaPredicted RBP21.57■■□□□ 1.04
NDE1-203ENST00000570727 GPRASP1Q5JY77 1395 aa21.57■■□□□ 1.04
NDE1-203ENST00000570727 SEPT12Q8IYM1 358 aa21.55■■□□□ 1.04
NDE1-203ENST00000570727 NGDNQ8NEJ9 315 aaKnown RBP21.55■■□□□ 1.04
NDE1-203ENST00000570727 NUDT16Q96DE0 195 aaKnown RBP21.54■■□□□ 1.04
NDE1-203ENST00000570727 CDK19Q9BWU1 502 aa21.52■■□□□ 1.04
NDE1-203ENST00000570727 CCDC9Q9Y3X0 531 aaKnown RBP21.52■■□□□ 1.04
NDE1-203ENST00000570727 NBPF1Q3BBV0 1214 aa21.51■■□□□ 1.03
NDE1-203ENST00000570727 BTG4Q9NY30 223 aa21.51■■□□□ 1.03
NDE1-203ENST00000570727 ATP7BP35670 1465 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms