RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 PIK3C2GO75747 1445 aa13.09□□□□□ -0.31
NPLOC4-204ENST00000570324 DHX57Q6P158 1386 aaKnown RBP13.08□□□□□ -0.31
NPLOC4-204ENST00000570324 ABCC11Q96J66 1382 aa13.08□□□□□ -0.31
NPLOC4-204ENST00000570324 YTHDC2Q9H6S0 1430 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-204ENST00000570324 C14orf93Q9H972 538 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-204ENST00000570324 CFAP70Q5T0N1 1121 aa13.07□□□□□ -0.32
NPLOC4-204ENST00000570324 C8orf37Q96NL8 207 aa13.07□□□□□ -0.32
NPLOC4-204ENST00000570324 KDM2AQ9Y2K7 1162 aa13.07□□□□□ -0.32
NPLOC4-204ENST00000570324 NPHP3Q7Z494 1330 aa13.07□□□□□ -0.32
NPLOC4-204ENST00000570324 CDC42BPGQ6DT37 1551 aa13.07□□□□□ -0.32
NPLOC4-204ENST00000570324 PNPLA6Q8IY17 1366 aa13.07□□□□□ -0.32
NPLOC4-204ENST00000570324 TECPR2O15040 1411 aa13.06□□□□□ -0.32
NPLOC4-204ENST00000570324 ADAMTS2O95450 1211 aa13.06□□□□□ -0.32
NPLOC4-204ENST00000570324 HRCP23327 699 aa13.06□□□□□ -0.32
NPLOC4-204ENST00000570324 RXRBP28702 533 aa13.06□□□□□ -0.32
NPLOC4-204ENST00000570324 NGLY1Q96IV0 654 aa13.06□□□□□ -0.32
NPLOC4-204ENST00000570324 AFF2P51816 1311 aa13.06□□□□□ -0.32
NPLOC4-204ENST00000570324 SOS2Q07890 1332 aaPredicted RBP13.06□□□□□ -0.32
NPLOC4-204ENST00000570324 LAMC1P11047 1609 aa13.06□□□□□ -0.32
NPLOC4-204ENST00000570324 KNDC1Q76NI1 1749 aa13.05□□□□□ -0.32
NPLOC4-204ENST00000570324 MYOM2P54296 1465 aa13.05□□□□□ -0.32
NPLOC4-204ENST00000570324 DCAF11Q8TEB1 546 aa13.05□□□□□ -0.32
NPLOC4-204ENST00000570324 SIRT1Q96EB6 747 aa13.05□□□□□ -0.32
NPLOC4-204ENST00000570324 POGKQ9P215 609 aa13.05□□□□□ -0.32
NPLOC4-204ENST00000570324 PLEKHH1Q9ULM0 1364 aa13.05□□□□□ -0.32
NPLOC4-204ENST00000570324 FOXO3O43524 673 aa13.04□□□□□ -0.32
NPLOC4-204ENST00000570324 SAFB2Q14151 953 aaKnown RBP eCLIP13.04□□□□□ -0.32
NPLOC4-204ENST00000570324 NRXN1Q9ULB1 1477 aa13.03□□□□□ -0.32
NPLOC4-204ENST00000570324 XPCQ01831 940 aaPredicted RBP13.02□□□□□ -0.33
NPLOC4-204ENST00000570324 STAC3Q96MF2 364 aa13.02□□□□□ -0.33
NPLOC4-204ENST00000570324 PRAM1Q96QH2 718 aa13.02□□□□□ -0.33
NPLOC4-204ENST00000570324 QTRT2Q9H974 415 aaKnown RBP13.01□□□□□ -0.33
NPLOC4-204ENST00000570324 FMN2Q9NZ56 1722 aa13□□□□□ -0.33
NPLOC4-204ENST00000570324 TRAK1Q9UPV9 953 aa13□□□□□ -0.33
NPLOC4-204ENST00000570324 HAP1P54257 671 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-204ENST00000570324 RBM6P78332 1123 aaKnown RBP12.99□□□□□ -0.33
NPLOC4-204ENST00000570324 USP21Q9UK80 565 aa12.99□□□□□ -0.33
NPLOC4-204ENST00000570324 PHF8Q9UPP1 1060 aa12.99□□□□□ -0.33
NPLOC4-204ENST00000570324 PSME1Q06323 249 aa12.98□□□□□ -0.33
NPLOC4-204ENST00000570324 KRT28Q7Z3Y7 464 aa12.98□□□□□ -0.33
NPLOC4-204ENST00000570324 KIF1AQ12756 1690 aa12.98□□□□□ -0.33
NPLOC4-204ENST00000570324 LMOD2Q6P5Q4 547 aa12.97□□□□□ -0.33
NPLOC4-204ENST00000570324 PXDNQ92626 1479 aa12.97□□□□□ -0.33
NPLOC4-204ENST00000570324 HIRIP3Q9BW71 556 aaPredicted RBP12.96□□□□□ -0.33
NPLOC4-204ENST00000570324 TRPC5Q9UL62 973 aaPredicted RBP12.96□□□□□ -0.33
NPLOC4-204ENST00000570324 DLC1Q96QB1 1528 aa12.96□□□□□ -0.33
NPLOC4-204ENST00000570324 COL22A1Q8NFW1 1626 aaPredicted RBP12.95□□□□□ -0.34
NPLOC4-204ENST00000570324 MINK1Q8N4C8 1332 aaPredicted RBP12.95□□□□□ -0.34
NPLOC4-204ENST00000570324 PLEKHG5O94827 1062 aa12.95□□□□□ -0.34
NPLOC4-204ENST00000570324 CDK12Q9NYV4 1490 aaPredicted RBP12.95□□□□□ -0.34
NPLOC4-204ENST00000570324 EIF3AQ14152 1382 aaKnown RBP12.94□□□□□ -0.34
NPLOC4-204ENST00000570324 RGPD8O14715 1765 aaPredicted RBP12.94□□□□□ -0.34
NPLOC4-204ENST00000570324 SPATA31A3Q5VYP0 1347 aa12.94□□□□□ -0.34
NPLOC4-204ENST00000570324 PMFBP1Q8TBY8 1022 aa12.94□□□□□ -0.34
NPLOC4-204ENST00000570324 FNBP4Q8N3X1 1017 aaPredicted RBP12.93□□□□□ -0.34
NPLOC4-204ENST00000570324 ADGRB1O14514 1584 aa12.93□□□□□ -0.34
NPLOC4-204ENST00000570324 ANKARQ7Z5J8 1434 aa12.92□□□□□ -0.34
NPLOC4-204ENST00000570324 UPF1Q92900 1129 aaKnown RBP eCLIP12.92□□□□□ -0.34
NPLOC4-204ENST00000570324 WASLO00401 505 aaPredicted RBP12.91□□□□□ -0.34
NPLOC4-204ENST00000570324 GPRASP1Q5JY77 1395 aa12.91□□□□□ -0.34
NPLOC4-204ENST00000570324 MARF1Q9Y4F3 1742 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-204ENST00000570324 RGS12O14924 1447 aa12.9□□□□□ -0.34
NPLOC4-204ENST00000570324 TNS3Q68CZ2 1445 aa12.9□□□□□ -0.34
NPLOC4-204ENST00000570324 NGDNQ8NEJ9 315 aaKnown RBP12.9□□□□□ -0.34
NPLOC4-204ENST00000570324 ADGRB2O60241 1585 aa12.9□□□□□ -0.35
NPLOC4-204ENST00000570324 CABLES1Q8TDN4 633 aa12.89□□□□□ -0.35
NPLOC4-204ENST00000570324 SBNO1A3KN83 1393 aa12.89□□□□□ -0.35
NPLOC4-204ENST00000570324 ARHGEF10O15013 1369 aa12.89□□□□□ -0.35
NPLOC4-204ENST00000570324 PAK3O75914 559 aaPredicted RBP12.88□□□□□ -0.35
NPLOC4-204ENST00000570324 USP32Q8NFA0 1604 aa12.88□□□□□ -0.35
NPLOC4-204ENST00000570324 TULP4Q9NRJ4 1543 aa12.88□□□□□ -0.35
NPLOC4-204ENST00000570324 ATRNO75882 1429 aa12.88□□□□□ -0.35
NPLOC4-204ENST00000570324 UNC5CLQ8IV45 518 aa12.87□□□□□ -0.35
NPLOC4-204ENST00000570324 GJD4Q96KN9 370 aaPredicted RBP12.87□□□□□ -0.35
NPLOC4-204ENST00000570324 CCDC9Q9Y3X0 531 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-204ENST00000570324 ATAD2Q6PL18 1390 aa12.86□□□□□ -0.35
NPLOC4-204ENST00000570324 ARHGEF28Q8N1W1 1705 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-204ENST00000570324 NUDT16Q96DE0 195 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-204ENST00000570324 PRR36Q9H6K5 1346 aa12.86□□□□□ -0.35
NPLOC4-204ENST00000570324 BCL9LQ86UU0 1499 aa12.85□□□□□ -0.35
NPLOC4-204ENST00000570324 KIAA1210Q9ULL0 1709 aa12.85□□□□□ -0.35
NPLOC4-204ENST00000570324 NEUROD1Q13562 356 aa12.85□□□□□ -0.35
NPLOC4-204ENST00000570324 CDK19Q9BWU1 502 aa12.85□□□□□ -0.35
NPLOC4-204ENST00000570324 NBPF1Q3BBV0 1214 aa12.84□□□□□ -0.35
NPLOC4-204ENST00000570324 ITSN1Q15811 1721 aa12.84□□□□□ -0.35
NPLOC4-204ENST00000570324 L3MBTL2Q969R5 705 aa12.83□□□□□ -0.36
NPLOC4-204ENST00000570324 SLIT2O94813 1529 aa12.83□□□□□ -0.36
NPLOC4-204ENST00000570324 SRPK2P78362 688 aaKnown RBP12.82□□□□□ -0.36
NPLOC4-204ENST00000570324 SIN3AQ96ST3 1273 aa12.82□□□□□ -0.36
NPLOC4-204ENST00000570324 CENPJQ9HC77 1338 aaPredicted RBP12.82□□□□□ -0.36
NPLOC4-204ENST00000570324 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.82□□□□□ -0.36
NPLOC4-204ENST00000570324 A0A0G2JS52 829 aa12.81□□□□□ -0.36
NPLOC4-204ENST00000570324 MYT1Q01538 1121 aa12.81□□□□□ -0.36
NPLOC4-204ENST00000570324 VPS72Q15906 364 aa12.81□□□□□ -0.36
NPLOC4-204ENST00000570324 CCDC61Q9Y6R9 512 aa12.81□□□□□ -0.36
NPLOC4-204ENST00000570324 ATP7BP35670 1465 aa12.8□□□□□ -0.36
NPLOC4-204ENST00000570324 RALGAPBQ86X10 1494 aa12.8□□□□□ -0.36
NPLOC4-204ENST00000570324 FAM83GA6ND36 823 aa12.8□□□□□ -0.36
NPLOC4-204ENST00000570324 PLCH1Q4KWH8 1693 aa12.8□□□□□ -0.36
NPLOC4-204ENST00000570324 ABCA3Q99758 1704 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms