RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 WAPLQ7Z5K2 1190 aa20.62■□□□□ 0.89
GTF3C1-211ENST00000569653 STK26Q9P289 416 aa20.62■□□□□ 0.89
GTF3C1-211ENST00000569653 MEX3CQ5U5Q3 659 aaKnown RBP20.61■□□□□ 0.89
GTF3C1-211ENST00000569653 MYOM2P54296 1465 aa20.61■□□□□ 0.89
GTF3C1-211ENST00000569653 FMN2Q9NZ56 1722 aa20.61■□□□□ 0.89
GTF3C1-211ENST00000569653 ABCC11Q96J66 1382 aa20.6■□□□□ 0.89
GTF3C1-211ENST00000569653 SOS2Q07890 1332 aaPredicted RBP20.6■□□□□ 0.89
GTF3C1-211ENST00000569653 LRRC59Q96AG4 307 aaKnown RBP20.6■□□□□ 0.89
GTF3C1-211ENST00000569653 YTHDC2Q9H6S0 1430 aaKnown RBP20.6■□□□□ 0.89
GTF3C1-211ENST00000569653 COL22A1Q8NFW1 1626 aaPredicted RBP20.58■□□□□ 0.89
GTF3C1-211ENST00000569653 RGPD8O14715 1765 aaPredicted RBP20.58■□□□□ 0.89
GTF3C1-211ENST00000569653 PXDNQ92626 1479 aa20.57■□□□□ 0.88
GTF3C1-211ENST00000569653 AFF2P51816 1311 aa20.56■□□□□ 0.88
GTF3C1-211ENST00000569653 CFAP70Q5T0N1 1121 aa20.55■□□□□ 0.88
GTF3C1-211ENST00000569653 C14orf93Q9H972 538 aaKnown RBP20.55■□□□□ 0.88
GTF3C1-211ENST00000569653 ZNF772Q68DY9 489 aaPredicted RBP20.54■□□□□ 0.88
GTF3C1-211ENST00000569653 ADGRB1O14514 1584 aa20.54■□□□□ 0.88
GTF3C1-211ENST00000569653 NUTM2FA1L443 756 aa20.52■□□□□ 0.88
GTF3C1-211ENST00000569653 XPCQ01831 940 aaPredicted RBP20.51■□□□□ 0.87
GTF3C1-211ENST00000569653 C8orf37Q96NL8 207 aa20.51■□□□□ 0.87
GTF3C1-211ENST00000569653 ACIN1Q9UKV3 1341 aaKnown RBP20.51■□□□□ 0.87
GTF3C1-211ENST00000569653 MARF1Q9Y4F3 1742 aaKnown RBP20.5■□□□□ 0.87
GTF3C1-211ENST00000569653 ESCO1Q5FWF5 840 aa20.5■□□□□ 0.87
GTF3C1-211ENST00000569653 USP32Q8NFA0 1604 aa20.49■□□□□ 0.87
GTF3C1-211ENST00000569653 ADAMTS2O95450 1211 aa20.49■□□□□ 0.87
GTF3C1-211ENST00000569653 KIF1AQ12756 1690 aa20.48■□□□□ 0.87
GTF3C1-211ENST00000569653 FOXO3O43524 673 aa20.48■□□□□ 0.87
GTF3C1-211ENST00000569653 CDK12Q9NYV4 1490 aaPredicted RBP20.48■□□□□ 0.87
GTF3C1-211ENST00000569653 DLC1Q96QB1 1528 aa20.48■□□□□ 0.87
GTF3C1-211ENST00000569653 RGS12O14924 1447 aa20.47■□□□□ 0.87
GTF3C1-211ENST00000569653 RXRBP28702 533 aa20.46■□□□□ 0.87
GTF3C1-211ENST00000569653 SIRT1Q96EB6 747 aa20.46■□□□□ 0.87
GTF3C1-211ENST00000569653 NPHP3Q7Z494 1330 aa20.46■□□□□ 0.87
GTF3C1-211ENST00000569653 DHX57Q6P158 1386 aaKnown RBP20.46■□□□□ 0.87
GTF3C1-211ENST00000569653 ADGRB2O60241 1585 aa20.44■□□□□ 0.86
GTF3C1-211ENST00000569653 SAFB2Q14151 953 aaKnown RBP eCLIP20.43■□□□□ 0.86
GTF3C1-211ENST00000569653 PRAM1Q96QH2 718 aa20.43■□□□□ 0.86
GTF3C1-211ENST00000569653 UPF1Q92900 1129 aaKnown RBP eCLIP20.42■□□□□ 0.863e-8■■■■■ 33.8
GTF3C1-211ENST00000569653 QTRT2Q9H974 415 aaKnown RBP20.42■□□□□ 0.86
GTF3C1-211ENST00000569653 HRCP23327 699 aa20.41■□□□□ 0.86
GTF3C1-211ENST00000569653 NGLY1Q96IV0 654 aa20.41■□□□□ 0.86
GTF3C1-211ENST00000569653 ARHGEF28Q8N1W1 1705 aaKnown RBP20.4■□□□□ 0.86
GTF3C1-211ENST00000569653 ABCA3Q99758 1704 aa20.4■□□□□ 0.86
GTF3C1-211ENST00000569653 BCL9LQ86UU0 1499 aa20.39■□□□□ 0.85
GTF3C1-211ENST00000569653 ATRNO75882 1429 aa20.39■□□□□ 0.85
GTF3C1-211ENST00000569653 FNBP4Q8N3X1 1017 aaPredicted RBP20.39■□□□□ 0.85
GTF3C1-211ENST00000569653 KDM2AQ9Y2K7 1162 aa20.39■□□□□ 0.85
GTF3C1-211ENST00000569653 SPATA31A3Q5VYP0 1347 aa20.38■□□□□ 0.85
GTF3C1-211ENST00000569653 DCAF11Q8TEB1 546 aa20.38■□□□□ 0.85
GTF3C1-211ENST00000569653 TRPM3Q9HCF6 1732 aaPredicted RBP20.37■□□□□ 0.85
GTF3C1-211ENST00000569653 RBM6P78332 1123 aaKnown RBP20.37■□□□□ 0.85
GTF3C1-211ENST00000569653 USP21Q9UK80 565 aa20.36■□□□□ 0.85
GTF3C1-211ENST00000569653 TRAK1Q9UPV9 953 aa20.36■□□□□ 0.85
GTF3C1-211ENST00000569653 EP400Q96L91 3159 aa20.36■□□□□ 0.85
GTF3C1-211ENST00000569653 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.36■□□□□ 0.85
GTF3C1-211ENST00000569653 PRR36Q9H6K5 1346 aa20.35■□□□□ 0.85
GTF3C1-211ENST00000569653 KRT28Q7Z3Y7 464 aa20.35■□□□□ 0.85
GTF3C1-211ENST00000569653 PHF8Q9UPP1 1060 aa20.35■□□□□ 0.85
GTF3C1-211ENST00000569653 HIRIP3Q9BW71 556 aaPredicted RBP20.34■□□□□ 0.85
GTF3C1-211ENST00000569653 TNS3Q68CZ2 1445 aa20.34■□□□□ 0.85
GTF3C1-211ENST00000569653 ANKARQ7Z5J8 1434 aa20.33■□□□□ 0.84
GTF3C1-211ENST00000569653 POGKQ9P215 609 aa20.32■□□□□ 0.84
GTF3C1-211ENST00000569653 SLIT2O94813 1529 aa20.32■□□□□ 0.84
GTF3C1-211ENST00000569653 ALS2Q96Q42 1657 aa20.32■□□□□ 0.84
GTF3C1-211ENST00000569653 MINK1Q8N4C8 1332 aaPredicted RBP20.31■□□□□ 0.84
GTF3C1-211ENST00000569653 GLI3P10071 1580 aa20.31■□□□□ 0.84
GTF3C1-211ENST00000569653 PLCH1Q4KWH8 1693 aa20.31■□□□□ 0.84
GTF3C1-211ENST00000569653 TULP4Q9NRJ4 1543 aa20.31■□□□□ 0.84
GTF3C1-211ENST00000569653 PMFBP1Q8TBY8 1022 aa20.3■□□□□ 0.84
GTF3C1-211ENST00000569653 TRPC5Q9UL62 973 aaPredicted RBP20.3■□□□□ 0.84
GTF3C1-211ENST00000569653 KIAA1210Q9ULL0 1709 aa20.3■□□□□ 0.84
GTF3C1-211ENST00000569653 CABLES1Q8TDN4 633 aa20.29■□□□□ 0.84
GTF3C1-211ENST00000569653 CRYBG1Q9Y4K1 1723 aa20.29■□□□□ 0.84
GTF3C1-211ENST00000569653 SBNO1A3KN83 1393 aa20.29■□□□□ 0.84
GTF3C1-211ENST00000569653 ATP7BP35670 1465 aa20.26■□□□□ 0.83
GTF3C1-211ENST00000569653 BRWD3Q6RI45 1802 aa20.26■□□□□ 0.83
GTF3C1-211ENST00000569653 WASLO00401 505 aaPredicted RBP20.25■□□□□ 0.83
GTF3C1-211ENST00000569653 PLEKHG5O94827 1062 aa20.25■□□□□ 0.83
GTF3C1-211ENST00000569653 TOPAZ1Q8N9V7 1692 aa20.25■□□□□ 0.83
GTF3C1-211ENST00000569653 ITSN1Q15811 1721 aa20.24■□□□□ 0.83
GTF3C1-211ENST00000569653 NWD2Q9ULI1 1742 aa20.24■□□□□ 0.83
GTF3C1-211ENST00000569653 RALGAPBQ86X10 1494 aa20.24■□□□□ 0.83
GTF3C1-211ENST00000569653 STAC3Q96MF2 364 aa20.24■□□□□ 0.83
GTF3C1-211ENST00000569653 NRAPQ86VF7 1730 aa20.24■□□□□ 0.83
GTF3C1-211ENST00000569653 PSME1Q06323 249 aa20.22■□□□□ 0.83
GTF3C1-211ENST00000569653 NBPF1Q3BBV0 1214 aa20.22■□□□□ 0.83
GTF3C1-211ENST00000569653 GJD4Q96KN9 370 aaPredicted RBP20.22■□□□□ 0.83
GTF3C1-211ENST00000569653 UNC5CLQ8IV45 518 aa20.21■□□□□ 0.83
GTF3C1-211ENST00000569653 ARHGEF10O15013 1369 aa20.21■□□□□ 0.83
GTF3C1-211ENST00000569653 LMOD2Q6P5Q4 547 aa20.19■□□□□ 0.82
GTF3C1-211ENST00000569653 EIF3AQ14152 1382 aaKnown RBP20.19■□□□□ 0.82
GTF3C1-211ENST00000569653 ATAD2Q6PL18 1390 aa20.19■□□□□ 0.82
GTF3C1-211ENST00000569653 FAM83GA6ND36 823 aa20.17■□□□□ 0.82
GTF3C1-211ENST00000569653 PHRF1Q9P1Y6 1649 aaKnown RBP20.16■□□□□ 0.82
GTF3C1-211ENST00000569653 NUDT16Q96DE0 195 aaKnown RBP20.15■□□□□ 0.82
GTF3C1-211ENST00000569653 QRICH2Q9H0J4 1663 aa20.15■□□□□ 0.82
GTF3C1-211ENST00000569653 COL14A1Q05707 1796 aaKnown RBP20.15■□□□□ 0.82
GTF3C1-211ENST00000569653 GPRASP1Q5JY77 1395 aa20.14■□□□□ 0.81
GTF3C1-211ENST00000569653 CDK19Q9BWU1 502 aa20.14■□□□□ 0.81
GTF3C1-211ENST00000569653 TRPM1Q7Z4N2 1603 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms