RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 NECTIN2Q92692 538 aa25.73■■□□□ 1.71
SCRT1-201ENST00000569446 SCAF11Q99590 1463 aaKnown RBP25.72■■□□□ 1.71
SCRT1-201ENST00000569446 SSH1Q8WYL5 1049 aa25.72■■□□□ 1.71
SCRT1-201ENST00000569446 ARHGEF12Q9NZN5 1544 aa25.71■■□□□ 1.71
SCRT1-201ENST00000569446 NOL8Q76FK4 1167 aaKnown RBP25.71■■□□□ 1.71
SCRT1-201ENST00000569446 NKTRP30414 1462 aaKnown RBP25.7■■□□□ 1.71
SCRT1-201ENST00000569446 C22orf23Q9BZE7 217 aa25.7■■□□□ 1.71
SCRT1-201ENST00000569446 IDI1Q13907 227 aa25.7■■□□□ 1.7
SCRT1-201ENST00000569446 DCTN1Q14203 1278 aa25.69■■□□□ 1.7
SCRT1-201ENST00000569446 TMEM57Q8N5G2 664 aa25.68■■□□□ 1.7
SCRT1-201ENST00000569446 CFAP65Q6ZU64 1925 aaKnown RBP25.67■■□□□ 1.7
SCRT1-201ENST00000569446 NAP1L5Q96NT1 182 aaPredicted RBP25.67■■□□□ 1.7
SCRT1-201ENST00000569446 PLCH2O75038 1416 aa25.66■■□□□ 1.7
SCRT1-201ENST00000569446 RRS1Q15050 365 aaKnown RBP25.66■■□□□ 1.7
SCRT1-201ENST00000569446 LTV1Q96GA3 475 aaPredicted RBP25.66■■□□□ 1.7
SCRT1-201ENST00000569446 TMPOP42166 694 aaKnown RBP25.66■■□□□ 1.7
SCRT1-201ENST00000569446 MVPQ14764 893 aaKnown RBP25.65■■□□□ 1.7
SCRT1-201ENST00000569446 FOXD4L6Q3SYB3 417 aaPredicted RBP25.65■■□□□ 1.7
SCRT1-201ENST00000569446 FOXD4L3Q6VB84 417 aaPredicted RBP25.65■■□□□ 1.7
SCRT1-201ENST00000569446 SHANK2Q9UPX8 1470 aa25.65■■□□□ 1.7
SCRT1-201ENST00000569446 KDM2BQ8NHM5 1336 aa25.65■■□□□ 1.7
SCRT1-201ENST00000569446 DDX19BQ9UMR2 479 aa25.65■■□□□ 1.7
SCRT1-201ENST00000569446 CDK19Q9BWU1 502 aa25.64■■□□□ 1.69
SCRT1-201ENST00000569446 TXNDC2Q86VQ3 553 aa25.63■■□□□ 1.69
SCRT1-201ENST00000569446 STAC3Q96MF2 364 aa25.63■■□□□ 1.69
SCRT1-201ENST00000569446 LMOD2Q6P5Q4 547 aa25.63■■□□□ 1.69
SCRT1-201ENST00000569446 TRIM27P14373 513 aa25.63■■□□□ 1.69
SCRT1-201ENST00000569446 OSCARQ8IYS5 282 aa25.63■■□□□ 1.69
SCRT1-201ENST00000569446 ADGRL1O94910 1474 aa25.62■■□□□ 1.69
SCRT1-201ENST00000569446 TRIM44Q96DX7 344 aaPredicted RBP25.61■■□□□ 1.69
SCRT1-201ENST00000569446 FANCAO15360 1455 aa25.61■■□□□ 1.69
SCRT1-201ENST00000569446 ZNF428Q96B54 188 aa25.6■■□□□ 1.69
SCRT1-201ENST00000569446 ATF7IPQ6VMQ6 1270 aa25.6■■□□□ 1.69
SCRT1-201ENST00000569446 GPRASP1Q5JY77 1395 aa25.6■■□□□ 1.69
SCRT1-201ENST00000569446 SAMD9LQ8IVG5 1584 aa25.59■■□□□ 1.69
SCRT1-201ENST00000569446 NUTM2GQ5VZR2 741 aa25.59■■□□□ 1.69
SCRT1-201ENST00000569446 GOLGA6L3A6NEY3 463 aa25.58■■□□□ 1.69
SCRT1-201ENST00000569446 PNNQ9H307 717 aaKnown RBP25.58■■□□□ 1.69
SCRT1-201ENST00000569446 ASXL1Q8IXJ9 1541 aa25.58■■□□□ 1.69
SCRT1-201ENST00000569446 TBC1D2Q9BYX2 928 aa25.58■■□□□ 1.69
SCRT1-201ENST00000569446 WDR63Q8IWG1 891 aa25.57■■□□□ 1.68
SCRT1-201ENST00000569446 EMILIN1Q9Y6C2 1016 aa25.57■■□□□ 1.68
SCRT1-201ENST00000569446 ANP32BQ92688 251 aaKnown RBP25.57■■□□□ 1.68
SCRT1-201ENST00000569446 UGGT1Q9NYU2 1555 aa25.57■■□□□ 1.68
SCRT1-201ENST00000569446 C14orf93Q9H972 538 aaKnown RBP25.56■■□□□ 1.68
SCRT1-201ENST00000569446 ZRANB1Q9UGI0 708 aa25.56■■□□□ 1.68
SCRT1-201ENST00000569446 MIS18AQ9NYP9 233 aa25.55■■□□□ 1.68
SCRT1-201ENST00000569446 ERCC6L2Q5T890 1561 aa25.55■■□□□ 1.68
SCRT1-201ENST00000569446 FAM83GA6ND36 823 aa25.55■■□□□ 1.68
SCRT1-201ENST00000569446 NCKAP5LQ9HCH0 1330 aa25.54■■□□□ 1.68
SCRT1-201ENST00000569446 FAM69CQ0P6D2 419 aa25.54■■□□□ 1.68
SCRT1-201ENST00000569446 ADGBQ8N7X0 1667 aa25.54■■□□□ 1.68
SCRT1-201ENST00000569446 BLMP54132 1417 aaPredicted RBP25.54■■□□□ 1.68
SCRT1-201ENST00000569446 DUOX2Q9NRD8 1548 aa25.54■■□□□ 1.68
SCRT1-201ENST00000569446 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.53■■□□□ 1.68
SCRT1-201ENST00000569446 COG3Q96JB2 828 aa25.52■■□□□ 1.68
SCRT1-201ENST00000569446 ABCA8O94911 1581 aa25.52■■□□□ 1.68
SCRT1-201ENST00000569446 KDM5DQ9BY66 1539 aa25.52■■□□□ 1.68
SCRT1-201ENST00000569446 CDC42BPAQ5VT25 1732 aa25.51■■□□□ 1.67
SCRT1-201ENST00000569446 NME9Q86XW9 330 aa25.51■■□□□ 1.67
SCRT1-201ENST00000569446 NGEFQ8N5V2 710 aa25.51■■□□□ 1.67
SCRT1-201ENST00000569446 WDR7Q9Y4E6 1490 aa25.51■■□□□ 1.67
SCRT1-201ENST00000569446 TTC37Q6PGP7 1564 aa25.5■■□□□ 1.67
SCRT1-201ENST00000569446 GOLGA6L22H0YM25 854 aa25.49■■□□□ 1.67
SCRT1-201ENST00000569446 FYB1O15117 783 aa25.49■■□□□ 1.67
SCRT1-201ENST00000569446 ZNF521Q96K83 1311 aa25.49■■□□□ 1.67
SCRT1-201ENST00000569446 RTF1Q92541 710 aaKnown RBP25.48■■□□□ 1.67
SCRT1-201ENST00000569446 ZMYM4Q5VZL5 1548 aa25.48■■□□□ 1.67
SCRT1-201ENST00000569446 L1TD1Q5T7N2 865 aaKnown RBP25.47■■□□□ 1.67
SCRT1-201ENST00000569446 TWISTNBQ3B726 338 aaPredicted RBP25.46■■□□□ 1.67
SCRT1-201ENST00000569446 TSPYL6Q8N831 410 aa25.45■■□□□ 1.66
SCRT1-201ENST00000569446 ARID3AQ99856 593 aa25.45■■□□□ 1.66
SCRT1-201ENST00000569446 SULT6B1Q6IMI4 303 aa25.44■■□□□ 1.66
SCRT1-201ENST00000569446 CHMP5Q9NZZ3 219 aa25.44■■□□□ 1.66
SCRT1-201ENST00000569446 TRIM6-TRIM34B2RNG4 842 aa25.44■■□□□ 1.66
SCRT1-201ENST00000569446 TRAK2O60296 914 aa25.44■■□□□ 1.66
SCRT1-201ENST00000569446 PHACTR3Q96KR7 559 aa25.44■■□□□ 1.66
SCRT1-201ENST00000569446 KIF16BQ96L93 1317 aa25.44■■□□□ 1.66
SCRT1-201ENST00000569446 KRT24Q2M2I5 525 aa25.43■■□□□ 1.66
SCRT1-201ENST00000569446 PLCB2Q00722 1185 aa25.42■■□□□ 1.66
SCRT1-201ENST00000569446 CD109Q6YHK3 1445 aa25.42■■□□□ 1.66
SCRT1-201ENST00000569446 MCM10Q7L590 875 aa25.42■■□□□ 1.66
SCRT1-201ENST00000569446 NGDNQ8NEJ9 315 aaKnown RBP25.42■■□□□ 1.66
SCRT1-201ENST00000569446 RBM42Q9BTD8 480 aaKnown RBP25.42■■□□□ 1.66
SCRT1-201ENST00000569446 CASC1Q6TDU7 716 aa25.4■■□□□ 1.66
SCRT1-201ENST00000569446 CHD1LQ86WJ1 897 aa25.4■■□□□ 1.66
SCRT1-201ENST00000569446 TAOK2Q9UL54 1235 aa25.4■■□□□ 1.66
SCRT1-201ENST00000569446 PIK3C2GO75747 1445 aa25.4■■□□□ 1.66
SCRT1-201ENST00000569446 SMARCA5O60264 1052 aaPredicted RBP25.4■■□□□ 1.66
SCRT1-201ENST00000569446 RILPL2Q969X0 211 aa25.4■■□□□ 1.66
SCRT1-201ENST00000569446 ATP10AO60312 1499 aa25.4■■□□□ 1.66
SCRT1-201ENST00000569446 SLC26A8Q96RN1 970 aa25.39■■□□□ 1.66
SCRT1-201ENST00000569446 AMPHP49418 695 aa25.39■■□□□ 1.65
SCRT1-201ENST00000569446 TBC1D32Q96NH3 1257 aa25.39■■□□□ 1.65
SCRT1-201ENST00000569446 GBP4Q96PP9 640 aa25.38■■□□□ 1.65
SCRT1-201ENST00000569446 DDX49Q9Y6V7 483 aaKnown RBP25.38■■□□□ 1.65
SCRT1-201ENST00000569446 CALD1Q05682 793 aaKnown RBP25.37■■□□□ 1.65
SCRT1-201ENST00000569446 MCM4P33991 863 aa25.37■■□□□ 1.65
SCRT1-201ENST00000569446 PANK2Q9BZ23 570 aa25.37■■□□□ 1.65
SCRT1-201ENST00000569446 GNAI1P63096 354 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms