RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 MYOM2P54296 1465 aa19■□□□□ 0.63
SNX29-207ENST00000568949 RPGRIP1LQ68CZ1 1315 aa18.99■□□□□ 0.63
SNX29-207ENST00000568949 NPHP3Q7Z494 1330 aa18.99■□□□□ 0.63
SNX29-207ENST00000568949 BCL9LQ86UU0 1499 aa18.97■□□□□ 0.63
SNX29-207ENST00000568949 MARF1Q9Y4F3 1742 aaKnown RBP18.96■□□□□ 0.63
SNX29-207ENST00000568949 CDC42BPGQ6DT37 1551 aa18.95■□□□□ 0.62
SNX29-207ENST00000568949 ESCO1Q5FWF5 840 aa18.95■□□□□ 0.62
SNX29-207ENST00000568949 PXDNQ92626 1479 aa18.95■□□□□ 0.62
SNX29-207ENST00000568949 GJD4Q96KN9 370 aaPredicted RBP18.94■□□□□ 0.62
SNX29-207ENST00000568949 SRCAPQ6ZRS2 3230 aa18.93■□□□□ 0.62
SNX29-207ENST00000568949 LRPPRCP42704 1394 aaKnown RBP18.93■□□□□ 0.62
SNX29-207ENST00000568949 PPLO60437 1756 aa18.91■□□□□ 0.62
SNX29-207ENST00000568949 FOXO3O43524 673 aa18.91■□□□□ 0.62
SNX29-207ENST00000568949 NAIPQ13075 1403 aa18.91■□□□□ 0.62
SNX29-207ENST00000568949 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.9■□□□□ 0.62
SNX29-207ENST00000568949 XPCQ01831 940 aaPredicted RBP18.87■□□□□ 0.61
SNX29-207ENST00000568949 UNC5CLQ8IV45 518 aa18.87■□□□□ 0.61
SNX29-207ENST00000568949 SLIT2O94813 1529 aa18.86■□□□□ 0.61
SNX29-207ENST00000568949 BLMP54132 1417 aaPredicted RBP18.86■□□□□ 0.61
SNX29-207ENST00000568949 EP400Q96L91 3159 aa18.86■□□□□ 0.61
SNX29-207ENST00000568949 RALGAPBQ86X10 1494 aa18.85■□□□□ 0.61
SNX29-207ENST00000568949 TECPR2O15040 1411 aa18.85■□□□□ 0.61
SNX29-207ENST00000568949 GLI3P10071 1580 aa18.85■□□□□ 0.61
SNX29-207ENST00000568949 PPARGC1BQ86YN6 1023 aaKnown RBP18.84■□□□□ 0.61
SNX29-207ENST00000568949 RRBP1Q9P2E9 1410 aaKnown RBP18.83■□□□□ 0.61
SNX29-207ENST00000568949 SPATA31A3Q5VYP0 1347 aa18.83■□□□□ 0.61
SNX29-207ENST00000568949 SLC4A1APQ9BWU0 796 aaKnown RBP18.83■□□□□ 0.6
SNX29-207ENST00000568949 ADGRF5Q8IZF2 1346 aa18.82■□□□□ 0.6
SNX29-207ENST00000568949 WAPLQ7Z5K2 1190 aa18.82■□□□□ 0.6
SNX29-207ENST00000568949 CCDC144AA2RUR9 1427 aa18.82■□□□□ 0.6
SNX29-207ENST00000568949 ABCC11Q96J66 1382 aa18.81■□□□□ 0.6
SNX29-207ENST00000568949 NUTM2FA1L443 756 aa18.81■□□□□ 0.6
SNX29-207ENST00000568949 STK26Q9P289 416 aa18.81■□□□□ 0.6
SNX29-207ENST00000568949 KIF1AQ12756 1690 aa18.81■□□□□ 0.6
SNX29-207ENST00000568949 BRWD3Q6RI45 1802 aa18.8■□□□□ 0.6
SNX29-207ENST00000568949 USP32Q8NFA0 1604 aa18.8■□□□□ 0.6
SNX29-207ENST00000568949 KNDC1Q76NI1 1749 aa18.8■□□□□ 0.6
SNX29-207ENST00000568949 FMN2Q9NZ56 1722 aa18.8■□□□□ 0.6
SNX29-207ENST00000568949 SF3B2Q13435 895 aaKnown RBP18.79■□□□□ 0.6
SNX29-207ENST00000568949 ANKRD30BQ9BXX2 1392 aa18.79■□□□□ 0.6
SNX29-207ENST00000568949 VPS72Q15906 364 aa18.78■□□□□ 0.6
SNX29-207ENST00000568949 KRT28Q7Z3Y7 464 aa18.78■□□□□ 0.6
SNX29-207ENST00000568949 DEFB132Q7Z7B7 95 aa18.78■□□□□ 0.6
SNX29-207ENST00000568949 SEPT12Q8IYM1 358 aa18.78■□□□□ 0.6
SNX29-207ENST00000568949 ONECUT3O60422 494 aaPredicted RBP18.77■□□□□ 0.6
SNX29-207ENST00000568949 PLEKHH1Q9ULM0 1364 aa18.77■□□□□ 0.6
SNX29-207ENST00000568949 SIRT1Q96EB6 747 aa18.76■□□□□ 0.59
SNX29-207ENST00000568949 SPATA31E1Q6ZUB1 1445 aa18.75■□□□□ 0.59
SNX29-207ENST00000568949 IFT172Q9UG01 1749 aa18.75■□□□□ 0.59
SNX29-207ENST00000568949 NWD2Q9ULI1 1742 aa18.75■□□□□ 0.59
SNX29-207ENST00000568949 HAP1P54257 671 aaPredicted RBP18.75■□□□□ 0.59
SNX29-207ENST00000568949 PSME1Q06323 249 aa18.75■□□□□ 0.59
SNX29-207ENST00000568949 TMEM132EQ6IEE7 984 aa18.75■□□□□ 0.59
SNX29-207ENST00000568949 TNS3Q68CZ2 1445 aa18.74■□□□□ 0.59
SNX29-207ENST00000568949 LRP5O75197 1615 aa18.74■□□□□ 0.59
SNX29-207ENST00000568949 RGL3Q3MIN7 710 aa18.74■□□□□ 0.59
SNX29-207ENST00000568949 YTHDC2Q9H6S0 1430 aaKnown RBP18.74■□□□□ 0.59
SNX29-207ENST00000568949 PIK3C2GO75747 1445 aa18.73■□□□□ 0.59
SNX29-207ENST00000568949 SBNO1A3KN83 1393 aa18.72■□□□□ 0.59
SNX29-207ENST00000568949 KRT27Q7Z3Y8 459 aa18.72■□□□□ 0.59
SNX29-207ENST00000568949 PHF8Q9UPP1 1060 aa18.72■□□□□ 0.59
SNX29-207ENST00000568949 PLCH1Q4KWH8 1693 aa18.72■□□□□ 0.59
SNX29-207ENST00000568949 RGPD8O14715 1765 aaPredicted RBP18.7■□□□□ 0.58
SNX29-207ENST00000568949 ARHGEF10O15013 1369 aa18.7■□□□□ 0.58
SNX29-207ENST00000568949 CABLES1Q8TDN4 633 aa18.7■□□□□ 0.58
SNX29-207ENST00000568949 CCDC9Q9Y3X0 531 aaKnown RBP18.7■□□□□ 0.58
SNX29-207ENST00000568949 NRXN1Q9ULB1 1477 aa18.69■□□□□ 0.58
SNX29-207ENST00000568949 BAG6P46379 1132 aa18.68■□□□□ 0.58
SNX29-207ENST00000568949 ABCA3Q99758 1704 aa18.68■□□□□ 0.58
SNX29-207ENST00000568949 C14orf93Q9H972 538 aaKnown RBP18.67■□□□□ 0.58
SNX29-207ENST00000568949 FAM83GA6ND36 823 aa18.66■□□□□ 0.58
SNX29-207ENST00000568949 LMOD2Q6P5Q4 547 aa18.65■□□□□ 0.58
SNX29-207ENST00000568949 DHX57Q6P158 1386 aaKnown RBP18.65■□□□□ 0.58
SNX29-207ENST00000568949 MPHOSPH9Q99550 1183 aa18.64■□□□□ 0.57
SNX29-207ENST00000568949 ANKARQ7Z5J8 1434 aa18.64■□□□□ 0.57
SNX29-207ENST00000568949 PLEKHG5O94827 1062 aa18.63■□□□□ 0.57
SNX29-207ENST00000568949 HRCP23327 699 aa18.63■□□□□ 0.57
SNX29-207ENST00000568949 NRAPQ86VF7 1730 aa18.63■□□□□ 0.57
SNX29-207ENST00000568949 A0A0G2JS52 829 aa18.62■□□□□ 0.57
SNX29-207ENST00000568949 PSDA5PKW4 1024 aaPredicted RBP18.62■□□□□ 0.57
SNX29-207ENST00000568949 MYT1Q01538 1121 aa18.62■□□□□ 0.57
SNX29-207ENST00000568949 FAM98CQ17RN3 349 aaKnown RBP18.61■□□□□ 0.57
SNX29-207ENST00000568949 PRAM1Q96QH2 718 aa18.61■□□□□ 0.57
SNX29-207ENST00000568949 CFAP70Q5T0N1 1121 aa18.6■□□□□ 0.57
SNX29-207ENST00000568949 RGPD1P0DJD0 1748 aa18.6■□□□□ 0.57
SNX29-207ENST00000568949 DLC1Q96QB1 1528 aa18.59■□□□□ 0.57
SNX29-207ENST00000568949 PMFBP1Q8TBY8 1022 aa18.59■□□□□ 0.57
SNX29-207ENST00000568949 BTG4Q9NY30 223 aa18.59■□□□□ 0.57
SNX29-207ENST00000568949 COL14A1Q05707 1796 aaKnown RBP18.59■□□□□ 0.57
SNX29-207ENST00000568949 TRPM3Q9HCF6 1732 aaPredicted RBP18.58■□□□□ 0.57
SNX29-207ENST00000568949 SAFB2Q14151 953 aaKnown RBP eCLIP18.58■□□□□ 0.56
SNX29-207ENST00000568949 DISP2A7MBM2 1401 aa18.57■□□□□ 0.56
SNX29-207ENST00000568949 ADGRB2O60241 1585 aa18.57■□□□□ 0.56
SNX29-207ENST00000568949 EN1Q05925 392 aaPredicted RBP18.57■□□□□ 0.56
SNX29-207ENST00000568949 POGKQ9P215 609 aa18.57■□□□□ 0.56
SNX29-207ENST00000568949 ALS2Q96Q42 1657 aa18.57■□□□□ 0.56
SNX29-207ENST00000568949 GPRASP1Q5JY77 1395 aa18.56■□□□□ 0.56
SNX29-207ENST00000568949 SPATA31A5Q5VU36 1347 aa18.56■□□□□ 0.56
SNX29-207ENST00000568949 SPATA31A7Q8IWB4 1347 aa18.56■□□□□ 0.56
SNX29-207ENST00000568949 EIF3AQ14152 1382 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms