RNA–Protein interactions for RNA: ENST00000568796.1

PKD1-236, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 447 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-236ENST00000568796 PRAG1Q86YV5 1406 aa23.03■■□□□ 1.28
PKD1-236ENST00000568796 TRPC5Q9UL62 973 aaPredicted RBP23.03■■□□□ 1.28
PKD1-236ENST00000568796 NPHP3Q7Z494 1330 aa23.03■■□□□ 1.28
PKD1-236ENST00000568796 ADGRF5Q8IZF2 1346 aa23.03■■□□□ 1.28
PKD1-236ENST00000568796 LAMC1P11047 1609 aa23.02■■□□□ 1.28
PKD1-236ENST00000568796 NUTM2FA1L443 756 aa23.02■■□□□ 1.28
PKD1-236ENST00000568796 XPCQ01831 940 aaPredicted RBP23.01■■□□□ 1.27
PKD1-236ENST00000568796 CCDC144AA2RUR9 1427 aa23■■□□□ 1.27
PKD1-236ENST00000568796 FOXO3O43524 673 aa23■■□□□ 1.27
PKD1-236ENST00000568796 WAPLQ7Z5K2 1190 aa22.99■■□□□ 1.27
PKD1-236ENST00000568796 FNBP4Q8N3X1 1017 aaPredicted RBP22.99■■□□□ 1.27
PKD1-236ENST00000568796 TMEM132EQ6IEE7 984 aa22.97■■□□□ 1.27
PKD1-236ENST00000568796 ATAD2Q6PL18 1390 aa22.97■■□□□ 1.27
PKD1-236ENST00000568796 CDC42BPGQ6DT37 1551 aa22.96■■□□□ 1.27
PKD1-236ENST00000568796 LRPPRCP42704 1394 aaKnown RBP22.95■■□□□ 1.26
PKD1-236ENST00000568796 MPHOSPH9Q99550 1183 aa22.95■■□□□ 1.26
PKD1-236ENST00000568796 ANKRD30BQ9BXX2 1392 aa22.94■■□□□ 1.26
PKD1-236ENST00000568796 COL22A1Q8NFW1 1626 aaPredicted RBP22.93■■□□□ 1.26
PKD1-236ENST00000568796 MYOM2P54296 1465 aa22.92■■□□□ 1.26
PKD1-236ENST00000568796 PXDNQ92626 1479 aa22.92■■□□□ 1.26
PKD1-236ENST00000568796 ATRNO75882 1429 aa22.92■■□□□ 1.26
PKD1-236ENST00000568796 PLEKHH1Q9ULM0 1364 aa22.91■■□□□ 1.26
PKD1-236ENST00000568796 SPATA31E1Q6ZUB1 1445 aa22.91■■□□□ 1.26
PKD1-236ENST00000568796 TECPR2O15040 1411 aa22.9■■□□□ 1.26
PKD1-236ENST00000568796 ABCC11Q96J66 1382 aa22.89■■□□□ 1.26
PKD1-236ENST00000568796 BCL9LQ86UU0 1499 aa22.87■■□□□ 1.25
PKD1-236ENST00000568796 YTHDC2Q9H6S0 1430 aaKnown RBP22.86■■□□□ 1.25
PKD1-236ENST00000568796 GJD4Q96KN9 370 aaPredicted RBP22.86■■□□□ 1.25
PKD1-236ENST00000568796 PIK3C2GO75747 1445 aa22.85■■□□□ 1.25
PKD1-236ENST00000568796 PLEKHG5O94827 1062 aa22.85■■□□□ 1.25
PKD1-236ENST00000568796 HAP1P54257 671 aaPredicted RBP22.85■■□□□ 1.25
PKD1-236ENST00000568796 KRT28Q7Z3Y7 464 aa22.85■■□□□ 1.25
PKD1-236ENST00000568796 SPATA31A3Q5VYP0 1347 aa22.83■■□□□ 1.25
PKD1-236ENST00000568796 IFT172Q9UG01 1749 aa22.83■■□□□ 1.25
PKD1-236ENST00000568796 SAFB2Q14151 953 aaKnown RBP eCLIP22.82■■□□□ 1.24
PKD1-236ENST00000568796 UNC5CLQ8IV45 518 aa22.82■■□□□ 1.24
PKD1-236ENST00000568796 ZRANB1Q9UGI0 708 aa22.82■■□□□ 1.24
PKD1-236ENST00000568796 KNDC1Q76NI1 1749 aa22.82■■□□□ 1.24
PKD1-236ENST00000568796 MARF1Q9Y4F3 1742 aaKnown RBP22.82■■□□□ 1.24
PKD1-236ENST00000568796 C14orf93Q9H972 538 aaKnown RBP22.81■■□□□ 1.24
PKD1-236ENST00000568796 PHF8Q9UPP1 1060 aa22.81■■□□□ 1.24
PKD1-236ENST00000568796 FMN2Q9NZ56 1722 aa22.8■■□□□ 1.24
PKD1-236ENST00000568796 CFAP70Q5T0N1 1121 aa22.8■■□□□ 1.24
PKD1-236ENST00000568796 LMOD2Q6P5Q4 547 aa22.8■■□□□ 1.24
PKD1-236ENST00000568796 DHX57Q6P158 1386 aaKnown RBP22.79■■□□□ 1.24
PKD1-236ENST00000568796 PSME1Q06323 249 aa22.79■■□□□ 1.24
PKD1-236ENST00000568796 CCDC125Q86Z20 511 aa22.79■■□□□ 1.24
PKD1-236ENST00000568796 SIRT1Q96EB6 747 aa22.79■■□□□ 1.24
PKD1-236ENST00000568796 KIF1AQ12756 1690 aa22.78■■□□□ 1.24
PKD1-236ENST00000568796 CABLES1Q8TDN4 633 aa22.77■■□□□ 1.24
PKD1-236ENST00000568796 PRAM1Q96QH2 718 aa22.77■■□□□ 1.24
PKD1-236ENST00000568796 POGKQ9P215 609 aa22.76■■□□□ 1.23
PKD1-236ENST00000568796 RALGAPBQ86X10 1494 aa22.76■■□□□ 1.23
PKD1-236ENST00000568796 CCDC9Q9Y3X0 531 aaKnown RBP22.75■■□□□ 1.23
PKD1-236ENST00000568796 SLIT2O94813 1529 aa22.75■■□□□ 1.23
PKD1-236ENST00000568796 TNS3Q68CZ2 1445 aa22.74■■□□□ 1.23
PKD1-236ENST00000568796 ACIN1Q9UKV3 1341 aaKnown RBP22.74■■□□□ 1.23
PKD1-236ENST00000568796 SRCAPQ6ZRS2 3230 aa22.74■■□□□ 1.23
PKD1-236ENST00000568796 EP400Q96L91 3159 aa22.73■■□□□ 1.23
PKD1-236ENST00000568796 USP32Q8NFA0 1604 aa22.72■■□□□ 1.23
PKD1-236ENST00000568796 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.72■■□□□ 1.23
PKD1-236ENST00000568796 RGPD8O14715 1765 aaPredicted RBP22.72■■□□□ 1.23
PKD1-236ENST00000568796 PMFBP1Q8TBY8 1022 aa22.72■■□□□ 1.23
PKD1-236ENST00000568796 GLI3P10071 1580 aa22.71■■□□□ 1.23
PKD1-236ENST00000568796 SEPT12Q8IYM1 358 aa22.7■■□□□ 1.22
PKD1-236ENST00000568796 NRXN1Q9ULB1 1477 aa22.7■■□□□ 1.22
PKD1-236ENST00000568796 SBNO1A3KN83 1393 aa22.69■■□□□ 1.22
PKD1-236ENST00000568796 ARHGEF10O15013 1369 aa22.69■■□□□ 1.22
PKD1-236ENST00000568796 SF3B2Q13435 895 aaKnown RBP22.69■■□□□ 1.22
PKD1-236ENST00000568796 VPS72Q15906 364 aa22.69■■□□□ 1.22
PKD1-236ENST00000568796 BLMP54132 1417 aaPredicted RBP22.67■■□□□ 1.22
PKD1-236ENST00000568796 A0A0G2JS52 829 aa22.67■■□□□ 1.22
PKD1-236ENST00000568796 MYT1Q01538 1121 aa22.67■■□□□ 1.22
PKD1-236ENST00000568796 HIRIP3Q9BW71 556 aaPredicted RBP22.67■■□□□ 1.22
PKD1-236ENST00000568796 TRAK1Q9UPV9 953 aa22.67■■□□□ 1.22
PKD1-236ENST00000568796 DEFB132Q7Z7B7 95 aa22.65■■□□□ 1.22
PKD1-236ENST00000568796 KDM2AQ9Y2K7 1162 aa22.65■■□□□ 1.22
PKD1-236ENST00000568796 MINK1Q8N4C8 1332 aaPredicted RBP22.64■■□□□ 1.22
PKD1-236ENST00000568796 FAM83GA6ND36 823 aa22.64■■□□□ 1.21
PKD1-236ENST00000568796 ANKARQ7Z5J8 1434 aa22.64■■□□□ 1.21
PKD1-236ENST00000568796 RAB3GAP2Q9H2M9 1393 aa22.63■■□□□ 1.21
PKD1-236ENST00000568796 DLC1Q96QB1 1528 aa22.62■■□□□ 1.21
PKD1-236ENST00000568796 BRWD3Q6RI45 1802 aa22.62■■□□□ 1.21
PKD1-236ENST00000568796 KRT27Q7Z3Y8 459 aa22.62■■□□□ 1.21
PKD1-236ENST00000568796 GPRASP1Q5JY77 1395 aa22.62■■□□□ 1.21
PKD1-236ENST00000568796 PLCH1Q4KWH8 1693 aa22.61■■□□□ 1.21
PKD1-236ENST00000568796 DCAF11Q8TEB1 546 aa22.6■■□□□ 1.21
PKD1-236ENST00000568796 ONECUT3O60422 494 aaPredicted RBP22.59■■□□□ 1.21
PKD1-236ENST00000568796 BTG4Q9NY30 223 aa22.59■■□□□ 1.21
PKD1-236ENST00000568796 NWD2Q9ULI1 1742 aa22.59■■□□□ 1.21
PKD1-236ENST00000568796 PAK3O75914 559 aaPredicted RBP22.58■■□□□ 1.21
PKD1-236ENST00000568796 FAM98CQ17RN3 349 aaKnown RBP22.58■■□□□ 1.21
PKD1-236ENST00000568796 NGDNQ8NEJ9 315 aaKnown RBP22.58■■□□□ 1.21
PKD1-236ENST00000568796 EIF3AQ14152 1382 aaKnown RBP22.58■■□□□ 1.21
PKD1-236ENST00000568796 ABCA3Q99758 1704 aa22.57■■□□□ 1.2
PKD1-236ENST00000568796 PRR36Q9H6K5 1346 aa22.57■■□□□ 1.2
PKD1-236ENST00000568796 ADGRB1O14514 1584 aa22.56■■□□□ 1.2
PKD1-236ENST00000568796 ADGRB2O60241 1585 aa22.56■■□□□ 1.2
PKD1-236ENST00000568796 WASLO00401 505 aaPredicted RBP22.56■■□□□ 1.2
PKD1-236ENST00000568796 TULP4Q9NRJ4 1543 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms