RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 TMEM132EQ6IEE7 984 aa27.98■■■□□ 2.07
SPSB3-210ENST00000568416 STK26Q9P289 416 aa27.98■■■□□ 2.07
SPSB3-210ENST00000568416 NRXN1Q9ULB1 1477 aa27.97■■■□□ 2.07
SPSB3-210ENST00000568416 ZNF772Q68DY9 489 aaPredicted RBP27.97■■■□□ 2.07
SPSB3-210ENST00000568416 MYOM2P54296 1465 aa27.96■■■□□ 2.07
SPSB3-210ENST00000568416 WAPLQ7Z5K2 1190 aa27.96■■■□□ 2.07
SPSB3-210ENST00000568416 SOS2Q07890 1332 aaPredicted RBP27.95■■■□□ 2.07
SPSB3-210ENST00000568416 KNDC1Q76NI1 1749 aa27.95■■■□□ 2.06
SPSB3-210ENST00000568416 YTHDC2Q9H6S0 1430 aaKnown RBP27.94■■■□□ 2.06
SPSB3-210ENST00000568416 C14orf93Q9H972 538 aaKnown RBP27.94■■■□□ 2.06
SPSB3-210ENST00000568416 PLEKHH1Q9ULM0 1364 aa27.93■■■□□ 2.06
SPSB3-210ENST00000568416 SIRT1Q96EB6 747 aa27.9■■■□□ 2.06
SPSB3-210ENST00000568416 HRCP23327 699 aa27.89■■■□□ 2.06
SPSB3-210ENST00000568416 CFAP70Q5T0N1 1121 aa27.89■■■□□ 2.06
SPSB3-210ENST00000568416 ESCO1Q5FWF5 840 aa27.88■■■□□ 2.05
SPSB3-210ENST00000568416 AFF2P51816 1311 aa27.88■■■□□ 2.05
SPSB3-210ENST00000568416 DHX57Q6P158 1386 aaKnown RBP27.86■■■□□ 2.05
SPSB3-210ENST00000568416 NPHP3Q7Z494 1330 aa27.85■■■□□ 2.05
SPSB3-210ENST00000568416 PXDNQ92626 1479 aa27.83■■■□□ 2.04
SPSB3-210ENST00000568416 NUTM2FA1L443 756 aa27.82■■■□□ 2.04
SPSB3-210ENST00000568416 C8orf37Q96NL8 207 aa27.82■■■□□ 2.04
SPSB3-210ENST00000568416 RXRBP28702 533 aa27.81■■■□□ 2.04
SPSB3-210ENST00000568416 FMN2Q9NZ56 1722 aa27.8■■■□□ 2.04
SPSB3-210ENST00000568416 COL22A1Q8NFW1 1626 aaPredicted RBP27.79■■■□□ 2.04
SPSB3-210ENST00000568416 FOXO3O43524 673 aa27.79■■■□□ 2.04
SPSB3-210ENST00000568416 ADAMTS2O95450 1211 aa27.78■■■□□ 2.04
SPSB3-210ENST00000568416 CDK12Q9NYV4 1490 aaPredicted RBP27.77■■■□□ 2.04
SPSB3-210ENST00000568416 ADGRB1O14514 1584 aa27.77■■■□□ 2.04
SPSB3-210ENST00000568416 DLC1Q96QB1 1528 aa27.77■■■□□ 2.04
SPSB3-210ENST00000568416 PRAM1Q96QH2 718 aa27.76■■■□□ 2.03
SPSB3-210ENST00000568416 XPCQ01831 940 aaPredicted RBP27.75■■■□□ 2.03
SPSB3-210ENST00000568416 NGLY1Q96IV0 654 aa27.75■■■□□ 2.03
SPSB3-210ENST00000568416 DCAF11Q8TEB1 546 aa27.74■■■□□ 2.03
SPSB3-210ENST00000568416 STAC3Q96MF2 364 aa27.73■■■□□ 2.03
SPSB3-210ENST00000568416 QTRT2Q9H974 415 aaKnown RBP27.73■■■□□ 2.03
SPSB3-210ENST00000568416 KDM2AQ9Y2K7 1162 aa27.73■■■□□ 2.03
SPSB3-210ENST00000568416 KIF1AQ12756 1690 aa27.72■■■□□ 2.03
SPSB3-210ENST00000568416 RBM6P78332 1123 aaKnown RBP27.7■■■□□ 2.02
SPSB3-210ENST00000568416 SAFB2Q14151 953 aaKnown RBP eCLIP27.7■■■□□ 2.02
SPSB3-210ENST00000568416 FNBP4Q8N3X1 1017 aaPredicted RBP27.69■■■□□ 2.02
SPSB3-210ENST00000568416 POGKQ9P215 609 aa27.68■■■□□ 2.02
SPSB3-210ENST00000568416 SPATA31A3Q5VYP0 1347 aa27.67■■■□□ 2.02
SPSB3-210ENST00000568416 USP21Q9UK80 565 aa27.67■■■□□ 2.02
SPSB3-210ENST00000568416 PHF8Q9UPP1 1060 aa27.67■■■□□ 2.02
SPSB3-210ENST00000568416 TRAK1Q9UPV9 953 aa27.67■■■□□ 2.02
SPSB3-210ENST00000568416 ADGRB2O60241 1585 aa27.66■■■□□ 2.02
SPSB3-210ENST00000568416 KRT28Q7Z3Y7 464 aa27.66■■■□□ 2.02
SPSB3-210ENST00000568416 UPF1Q92900 1129 aaKnown RBP eCLIP27.66■■■□□ 2.02
SPSB3-210ENST00000568416 RGS12O14924 1447 aa27.66■■■□□ 2.02
SPSB3-210ENST00000568416 ANKARQ7Z5J8 1434 aa27.63■■■□□ 2.01
SPSB3-210ENST00000568416 TRPC5Q9UL62 973 aaPredicted RBP27.62■■■□□ 2.01
SPSB3-210ENST00000568416 RGPD8O14715 1765 aaPredicted RBP27.6■■■□□ 2.01
SPSB3-210ENST00000568416 USP32Q8NFA0 1604 aa27.6■■■□□ 2.01
SPSB3-210ENST00000568416 ATRNO75882 1429 aa27.6■■■□□ 2.01
SPSB3-210ENST00000568416 TNS3Q68CZ2 1445 aa27.59■■■□□ 2.01
SPSB3-210ENST00000568416 PSME1Q06323 249 aa27.59■■■□□ 2.01
SPSB3-210ENST00000568416 BCL9LQ86UU0 1499 aa27.58■■■□□ 2.01
SPSB3-210ENST00000568416 HIRIP3Q9BW71 556 aaPredicted RBP27.58■■■□□ 2.01
SPSB3-210ENST00000568416 MINK1Q8N4C8 1332 aaPredicted RBP27.58■■■□□ 2.01
SPSB3-210ENST00000568416 SBNO1A3KN83 1393 aa27.58■■■□□ 2.01
SPSB3-210ENST00000568416 MARF1Q9Y4F3 1742 aaKnown RBP27.56■■■□□ 2
SPSB3-210ENST00000568416 PMFBP1Q8TBY8 1022 aa27.55■■■□□ 2
SPSB3-210ENST00000568416 EIF3AQ14152 1382 aaKnown RBP27.55■■■□□ 2
SPSB3-210ENST00000568416 WASLO00401 505 aaPredicted RBP27.54■■■□□ 2
SPSB3-210ENST00000568416 PRR36Q9H6K5 1346 aa27.54■■■□□ 2
SPSB3-210ENST00000568416 TULP4Q9NRJ4 1543 aa27.54■■■□□ 2
SPSB3-210ENST00000568416 SLIT2O94813 1529 aa27.51■■■□□ 2
SPSB3-210ENST00000568416 ARHGEF28Q8N1W1 1705 aaKnown RBP27.5■■□□□ 1.99
SPSB3-210ENST00000568416 ARHGEF10O15013 1369 aa27.5■■□□□ 1.99
SPSB3-210ENST00000568416 CABLES1Q8TDN4 633 aa27.48■■□□□ 1.99
SPSB3-210ENST00000568416 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.47■■□□□ 1.99
SPSB3-210ENST00000568416 UNC5CLQ8IV45 518 aa27.46■■□□□ 1.99
SPSB3-210ENST00000568416 GJD4Q96KN9 370 aaPredicted RBP27.46■■□□□ 1.99
SPSB3-210ENST00000568416 KIAA1210Q9ULL0 1709 aa27.46■■□□□ 1.99
SPSB3-210ENST00000568416 HAP1P54257 671 aaPredicted RBP27.45■■□□□ 1.98
SPSB3-210ENST00000568416 LMOD2Q6P5Q4 547 aa27.45■■□□□ 1.98
SPSB3-210ENST00000568416 TRPM3Q9HCF6 1732 aaPredicted RBP27.44■■□□□ 1.98
SPSB3-210ENST00000568416 GPRASP1Q5JY77 1395 aa27.44■■□□□ 1.98
SPSB3-210ENST00000568416 ATAD2Q6PL18 1390 aa27.43■■□□□ 1.98
SPSB3-210ENST00000568416 ATP7BP35670 1465 aa27.43■■□□□ 1.98
SPSB3-210ENST00000568416 ABCA3Q99758 1704 aa27.42■■□□□ 1.98
SPSB3-210ENST00000568416 PLEKHG5O94827 1062 aa27.42■■□□□ 1.98
SPSB3-210ENST00000568416 NBPF1Q3BBV0 1214 aa27.42■■□□□ 1.98
SPSB3-210ENST00000568416 RALGAPBQ86X10 1494 aa27.4■■□□□ 1.98
SPSB3-210ENST00000568416 NUDT16Q96DE0 195 aaKnown RBP27.4■■□□□ 1.98
SPSB3-210ENST00000568416 ALS2Q96Q42 1657 aa27.4■■□□□ 1.98
SPSB3-210ENST00000568416 GLI3P10071 1580 aa27.39■■□□□ 1.98
SPSB3-210ENST00000568416 NGDNQ8NEJ9 315 aaKnown RBP27.39■■□□□ 1.98
SPSB3-210ENST00000568416 CDK19Q9BWU1 502 aa27.38■■□□□ 1.97
SPSB3-210ENST00000568416 FAM83GA6ND36 823 aa27.35■■□□□ 1.97
SPSB3-210ENST00000568416 VPS72Q15906 364 aa27.35■■□□□ 1.97
SPSB3-210ENST00000568416 PLCH1Q4KWH8 1693 aa27.35■■□□□ 1.97
SPSB3-210ENST00000568416 ITSN1Q15811 1721 aa27.34■■□□□ 1.97
SPSB3-210ENST00000568416 NWD2Q9ULI1 1742 aa27.34■■□□□ 1.97
SPSB3-210ENST00000568416 L3MBTL2Q969R5 705 aa27.34■■□□□ 1.97
SPSB3-210ENST00000568416 PAK3O75914 559 aaPredicted RBP27.31■■□□□ 1.96
SPSB3-210ENST00000568416 SIN3AQ96ST3 1273 aa27.31■■□□□ 1.96
SPSB3-210ENST00000568416 TOPAZ1Q8N9V7 1692 aa27.3■■□□□ 1.96
SPSB3-210ENST00000568416 CCDC61Q9Y6R9 512 aa27.3■■□□□ 1.96
SPSB3-210ENST00000568416 POLR3AO14802 1390 aaPredicted RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms