RNA–Protein interactions for RNA: ENST00000567954.5

LYRM1-208, Transcript of LYR motif containing 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene LYRM1, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LYRM1-208	ENST00000567954	PTPRU	Q92729	1446 aa		12.19	□□□□□ -0.46
LYRM1-208	ENST00000567954	COL22A1	Q8NFW1	1626 aa	Predicted RBP	12.19	□□□□□ -0.46
LYRM1-208	ENST00000567954	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	12.18	□□□□□ -0.46
LYRM1-208	ENST00000567954	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.18	□□□□□ -0.46
LYRM1-208	ENST00000567954	ADGRL3	Q9HAR2	1447 aa		12.18	□□□□□ -0.46
LYRM1-208	ENST00000567954	RIMS2	Q9UQ26	1411 aa		12.18	□□□□□ -0.46
LYRM1-208	ENST00000567954	TRIM37	O94972	964 aa		12.17	□□□□□ -0.46
LYRM1-208	ENST00000567954	FAM98C	Q17RN3	349 aa	Known RBP	12.17	□□□□□ -0.46
LYRM1-208	ENST00000567954	TRPM2	O94759	1503 aa		12.16	□□□□□ -0.46
LYRM1-208	ENST00000567954	LAMC1	P11047	1609 aa		12.16	□□□□□ -0.46
LYRM1-208	ENST00000567954	PTGER2	P43116	358 aa		12.16	□□□□□ -0.46
LYRM1-208	ENST00000567954	NOS1	P29475	1434 aa		12.15	□□□□□ -0.46
LYRM1-208	ENST00000567954	DNAJC5G	Q8N7S2	189 aa		12.15	□□□□□ -0.46
LYRM1-208	ENST00000567954	CFAP65	Q6ZU64	1925 aa	Known RBP	12.15	□□□□□ -0.46
LYRM1-208	ENST00000567954	RGPD1	P0DJD0	1748 aa		12.14	□□□□□ -0.47
LYRM1-208	ENST00000567954	EHBP1L1	Q8N3D4	1523 aa		12.14	□□□□□ -0.47
LYRM1-208	ENST00000567954	NPHP3	Q7Z494	1330 aa		12.13	□□□□□ -0.47
LYRM1-208	ENST00000567954	FAM196A	Q6ZSG2	479 aa		12.13	□□□□□ -0.47
LYRM1-208	ENST00000567954	UBTF	P17480	764 aa	Known RBP	12.12	□□□□□ -0.47
LYRM1-208	ENST00000567954	GPR162	Q16538	588 aa		12.12	□□□□□ -0.47
LYRM1-208	ENST00000567954	EEA1	Q15075	1411 aa		12.11	□□□□□ -0.47
LYRM1-208	ENST00000567954	APLP1	P51693	650 aa		12.11	□□□□□ -0.47
LYRM1-208	ENST00000567954	CHD4	Q14839	1912 aa		12.11	□□□□□ -0.47
LYRM1-208	ENST00000567954	CEP152	O94986	1710 aa		12.11	□□□□□ -0.47
LYRM1-208	ENST00000567954	EIF2AK4	Q9P2K8	1649 aa	Known RBP	12.11	□□□□□ -0.47
LYRM1-208	ENST00000567954	ADGRB2	O60241	1585 aa		12.1	□□□□□ -0.47
LYRM1-208	ENST00000567954	ZBTB7A	O95365	584 aa		12.1	□□□□□ -0.47
LYRM1-208	ENST00000567954	NRK	Q7Z2Y5	1582 aa		12.09	□□□□□ -0.47
LYRM1-208	ENST00000567954	GOLGB1	Q14789	3259 aa	Known RBP	12.09	□□□□□ -0.47
LYRM1-208	ENST00000567954	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.08	□□□□□ -0.48
LYRM1-208	ENST00000567954	WWC3	Q9ULE0	1092 aa		12.07	□□□□□ -0.48
LYRM1-208	ENST00000567954	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.07	□□□□□ -0.48
LYRM1-208	ENST00000567954	KANK1	Q14678	1352 aa		12.06	□□□□□ -0.48
LYRM1-208	ENST00000567954	SHANK3	Q9BYB0	1731 aa		12.06	□□□□□ -0.48
LYRM1-208	ENST00000567954	TNS1	Q9HBL0	1735 aa	Known RBP	12.06	□□□□□ -0.48
LYRM1-208	ENST00000567954	XPC	Q01831	940 aa	Predicted RBP	12.06	□□□□□ -0.48
LYRM1-208	ENST00000567954	PDGFD	Q9GZP0	370 aa	Predicted RBP	12.06	□□□□□ -0.48
LYRM1-208	ENST00000567954	FYCO1	Q9BQS8	1478 aa		12.06	□□□□□ -0.48
LYRM1-208	ENST00000567954	FOXO3	O43524	673 aa		12.05	□□□□□ -0.48
LYRM1-208	ENST00000567954	ADGRL2	O95490	1459 aa		12.05	□□□□□ -0.48
LYRM1-208	ENST00000567954	PXDN	Q92626	1479 aa		12.05	□□□□□ -0.48
LYRM1-208	ENST00000567954	MARF1	Q9Y4F3	1742 aa	Known RBP	12.05	□□□□□ -0.48
LYRM1-208	ENST00000567954	MAP3K5	Q99683	1374 aa		12.05	□□□□□ -0.48
LYRM1-208	ENST00000567954	HAP1	P54257	671 aa	Predicted RBP	12.04	□□□□□ -0.48
LYRM1-208	ENST00000567954	ESCO1	Q5FWF5	840 aa		12.04	□□□□□ -0.48
LYRM1-208	ENST00000567954	JMY	Q8N9B5	988 aa		12.04	□□□□□ -0.48
LYRM1-208	ENST00000567954	DLC1	Q96QB1	1528 aa		12.04	□□□□□ -0.48
LYRM1-208	ENST00000567954	AATK	Q6ZMQ8	1374 aa		12.04	□□□□□ -0.48
LYRM1-208	ENST00000567954	SGIP1	Q9BQI5	828 aa		12.03	□□□□□ -0.48
LYRM1-208	ENST00000567954	SPATA31A3	Q5VYP0	1347 aa		12.03	□□□□□ -0.48
LYRM1-208	ENST00000567954	TMEM131L	A2VDJ0	1609 aa		12.03	□□□□□ -0.48
LYRM1-208	ENST00000567954	LRPPRC	P42704	1394 aa	Known RBP	12.03	□□□□□ -0.48
LYRM1-208	ENST00000567954	ATP10D	Q9P241	1426 aa		12.03	□□□□□ -0.48
LYRM1-208	ENST00000567954	ARHGEF5	Q12774	1597 aa		12.02	□□□□□ -0.49
LYRM1-208	ENST00000567954	LMTK2	Q8IWU2	1503 aa		12.01	□□□□□ -0.49
LYRM1-208	ENST00000567954	RREB1	Q92766	1687 aa		12.01	□□□□□ -0.49
LYRM1-208	ENST00000567954	NUP188	Q5SRE5	1749 aa		12.01	□□□□□ -0.49
LYRM1-208	ENST00000567954	CHGA	P10645	457 aa	Known RBP	12.01	□□□□□ -0.49
LYRM1-208	ENST00000567954	ARX	Q96QS3	562 aa		12.01	□□□□□ -0.49
LYRM1-208	ENST00000567954	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.01	□□□□□ -0.49
LYRM1-208	ENST00000567954	MET	P08581	1390 aa		12.01	□□□□□ -0.49
LYRM1-208	ENST00000567954	MYOM1	P52179	1685 aa		12	□□□□□ -0.49
LYRM1-208	ENST00000567954	MTFR1L	Q9H019	292 aa		12	□□□□□ -0.49
LYRM1-208	ENST00000567954	SPATA31A5	Q5VU36	1347 aa		12	□□□□□ -0.49
LYRM1-208	ENST00000567954	SPATA31A7	Q8IWB4	1347 aa		12	□□□□□ -0.49
LYRM1-208	ENST00000567954	CEP162	Q5TB80	1403 aa		12	□□□□□ -0.49
LYRM1-208	ENST00000567954	DUOX2	Q9NRD8	1548 aa		12	□□□□□ -0.49
LYRM1-208	ENST00000567954	XRN1	Q8IZH2	1706 aa	Known RBP	12	□□□□□ -0.49
LYRM1-208	ENST00000567954	KLRG1	Q96E93	195 aa		11.99	□□□□□ -0.49
LYRM1-208	ENST00000567954	USP32	Q8NFA0	1604 aa		11.99	□□□□□ -0.49
LYRM1-208	ENST00000567954	PCNT	O95613	3336 aa		11.98	□□□□□ -0.49
LYRM1-208	ENST00000567954	CABLES1	Q8TDN4	633 aa		11.98	□□□□□ -0.49
LYRM1-208	ENST00000567954	BTG4	Q9NY30	223 aa		11.98	□□□□□ -0.49
LYRM1-208	ENST00000567954	ABCC5	O15440	1437 aa		11.97	□□□□□ -0.49
LYRM1-208	ENST00000567954	ERBIN	Q96RT1	1412 aa		11.97	□□□□□ -0.49
LYRM1-208	ENST00000567954	GRIN3B	O60391	1043 aa		11.97	□□□□□ -0.49
LYRM1-208	ENST00000567954	PELP1	Q8IZL8	1130 aa	Known RBP	11.97	□□□□□ -0.49
LYRM1-208	ENST00000567954	PLSCR1	O15162	318 aa		11.96	□□□□□ -0.49
LYRM1-208	ENST00000567954	KIF15	Q9NS87	1388 aa		11.95	□□□□□ -0.5
LYRM1-208	ENST00000567954	PTPN23	Q9H3S7	1636 aa		11.95	□□□□□ -0.5
LYRM1-208	ENST00000567954	NEXMIF	Q5QGS0	1516 aa		11.95	□□□□□ -0.5
LYRM1-208	ENST00000567954	ZNF526	Q8TF50	670 aa	Predicted RBP	11.94	□□□□□ -0.5
LYRM1-208	ENST00000567954	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.94	□□□□□ -0.5
LYRM1-208	ENST00000567954	CASZ1	Q86V15	1759 aa		11.94	□□□□□ -0.5
LYRM1-208	ENST00000567954	NWD2	Q9ULI1	1742 aa		11.94	□□□□□ -0.5
LYRM1-208	ENST00000567954	KIF3C	O14782	793 aa		11.93	□□□□□ -0.5
LYRM1-208	ENST00000567954	PDE3B	Q13370	1112 aa		11.93	□□□□□ -0.5
LYRM1-208	ENST00000567954	RRP7BP	Q9NSQ0	103 aa		11.93	□□□□□ -0.5
LYRM1-208	ENST00000567954	NALCN	Q8IZF0	1738 aa		11.93	□□□□□ -0.5
LYRM1-208	ENST00000567954	THSD7A	Q9UPZ6	1657 aa		11.91	□□□□□ -0.5
LYRM1-208	ENST00000567954	FAM161A	Q3B820	660 aa		11.91	□□□□□ -0.5
LYRM1-208	ENST00000567954	KRT28	Q7Z3Y7	464 aa		11.91	□□□□□ -0.5
LYRM1-208	ENST00000567954	PLEKHG5	O94827	1062 aa		11.9	□□□□□ -0.5
LYRM1-208	ENST00000567954	STK32B	Q9NY57	414 aa		11.9	□□□□□ -0.5
LYRM1-208	ENST00000567954	ADCY9	O60503	1353 aa		11.9	□□□□□ -0.5
LYRM1-208	ENST00000567954	YBX3	P16989	372 aa	Known RBP eCLIP	11.89	□□□□□ -0.51
LYRM1-208	ENST00000567954	SLC15A2	Q16348	729 aa		11.89	□□□□□ -0.51
LYRM1-208	ENST00000567954	ROBO2	Q9HCK4	1378 aa		11.89	□□□□□ -0.51
LYRM1-208	ENST00000567954	SPATA31A1	Q5TZJ5	1347 aa		11.88	□□□□□ -0.51
LYRM1-208	ENST00000567954	PLCH1	Q4KWH8	1693 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms