RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 ESCO1Q5FWF5 840 aa27.97■■■□□ 2.07
GTF3C1-207ENST00000567806 UPF1Q92900 1129 aaKnown RBP eCLIP27.96■■■□□ 2.079e-15■■■■■ 92.4
GTF3C1-207ENST00000567806 SPATA31E1Q6ZUB1 1445 aa27.94■■■□□ 2.06
GTF3C1-207ENST00000567806 WAPLQ7Z5K2 1190 aa27.94■■■□□ 2.06
GTF3C1-207ENST00000567806 RBM6P78332 1123 aaKnown RBP27.93■■■□□ 2.06
GTF3C1-207ENST00000567806 TMEM132EQ6IEE7 984 aa27.93■■■□□ 2.06
GTF3C1-207ENST00000567806 CDK12Q9NYV4 1490 aaPredicted RBP27.91■■■□□ 2.06
GTF3C1-207ENST00000567806 NPHP3Q7Z494 1330 aa27.91■■■□□ 2.06
GTF3C1-207ENST00000567806 LRPPRCP42704 1394 aaKnown RBP27.9■■■□□ 2.06
GTF3C1-207ENST00000567806 ABCC11Q96J66 1382 aa27.89■■■□□ 2.06
GTF3C1-207ENST00000567806 LAMC1P11047 1609 aa27.89■■■□□ 2.05
GTF3C1-207ENST00000567806 NUTM2FA1L443 756 aa27.88■■■□□ 2.05
GTF3C1-207ENST00000567806 FOXO3O43524 673 aa27.87■■■□□ 2.05
GTF3C1-207ENST00000567806 TECPR2O15040 1411 aa27.85■■■□□ 2.05
GTF3C1-207ENST00000567806 USP21Q9UK80 565 aa27.85■■■□□ 2.05
GTF3C1-207ENST00000567806 CDC42BPGQ6DT37 1551 aa27.84■■■□□ 2.05
GTF3C1-207ENST00000567806 XPCQ01831 940 aaPredicted RBP27.83■■■□□ 2.05
GTF3C1-207ENST00000567806 PIK3C2GO75747 1445 aa27.83■■■□□ 2.05
GTF3C1-207ENST00000567806 SIRT1Q96EB6 747 aa27.82■■■□□ 2.04
GTF3C1-207ENST00000567806 C14orf93Q9H972 538 aaKnown RBP27.82■■■□□ 2.04
GTF3C1-207ENST00000567806 TRPC5Q9UL62 973 aaPredicted RBP27.81■■■□□ 2.04
GTF3C1-207ENST00000567806 PLEKHH1Q9ULM0 1364 aa27.81■■■□□ 2.04
GTF3C1-207ENST00000567806 YTHDC2Q9H6S0 1430 aaKnown RBP27.81■■■□□ 2.04
GTF3C1-207ENST00000567806 FNBP4Q8N3X1 1017 aaPredicted RBP27.8■■■□□ 2.04
GTF3C1-207ENST00000567806 IFT172Q9UG01 1749 aa27.78■■■□□ 2.04
GTF3C1-207ENST00000567806 DHX57Q6P158 1386 aaKnown RBP27.78■■■□□ 2.04
GTF3C1-207ENST00000567806 CFAP70Q5T0N1 1121 aa27.78■■■□□ 2.04
GTF3C1-207ENST00000567806 RGS12O14924 1447 aa27.77■■■□□ 2.04
GTF3C1-207ENST00000567806 PXDNQ92626 1479 aa27.76■■■□□ 2.03
GTF3C1-207ENST00000567806 COL22A1Q8NFW1 1626 aaPredicted RBP27.73■■■□□ 2.03
GTF3C1-207ENST00000567806 RAB3GAP2Q9H2M9 1393 aa27.73■■■□□ 2.03
GTF3C1-207ENST00000567806 MYOM2P54296 1465 aa27.72■■■□□ 2.03
GTF3C1-207ENST00000567806 KRT28Q7Z3Y7 464 aa27.72■■■□□ 2.03
GTF3C1-207ENST00000567806 KNDC1Q76NI1 1749 aa27.72■■■□□ 2.03
GTF3C1-207ENST00000567806 PRAM1Q96QH2 718 aa27.7■■■□□ 2.02
GTF3C1-207ENST00000567806 POGKQ9P215 609 aa27.7■■■□□ 2.02
GTF3C1-207ENST00000567806 SPATA31A3Q5VYP0 1347 aa27.69■■■□□ 2.02
GTF3C1-207ENST00000567806 PSME1Q06323 249 aa27.69■■■□□ 2.02
GTF3C1-207ENST00000567806 SAFB2Q14151 953 aaKnown RBP eCLIP27.69■■■□□ 2.02
GTF3C1-207ENST00000567806 PHF8Q9UPP1 1060 aa27.69■■■□□ 2.02
GTF3C1-207ENST00000567806 NRXN1Q9ULB1 1477 aa27.68■■■□□ 2.02
GTF3C1-207ENST00000567806 ATRNO75882 1429 aa27.67■■■□□ 2.02
GTF3C1-207ENST00000567806 ATAD2Q6PL18 1390 aa27.66■■■□□ 2.02
GTF3C1-207ENST00000567806 FMN2Q9NZ56 1722 aa27.65■■■□□ 2.02
GTF3C1-207ENST00000567806 KDM2AQ9Y2K7 1162 aa27.64■■■□□ 2.02
GTF3C1-207ENST00000567806 BCL9LQ86UU0 1499 aa27.64■■■□□ 2.01
GTF3C1-207ENST00000567806 HAP1P54257 671 aaPredicted RBP27.63■■■□□ 2.01
GTF3C1-207ENST00000567806 GJD4Q96KN9 370 aaPredicted RBP27.63■■■□□ 2.01
GTF3C1-207ENST00000567806 KIF1AQ12756 1690 aa27.62■■■□□ 2.01
GTF3C1-207ENST00000567806 DCAF11Q8TEB1 546 aa27.61■■■□□ 2.01
GTF3C1-207ENST00000567806 LMOD2Q6P5Q4 547 aa27.6■■■□□ 2.01
GTF3C1-207ENST00000567806 UNC5CLQ8IV45 518 aa27.6■■■□□ 2.01
GTF3C1-207ENST00000567806 TRAK1Q9UPV9 953 aa27.6■■■□□ 2.01
GTF3C1-207ENST00000567806 PLEKHG5O94827 1062 aa27.58■■■□□ 2.01
GTF3C1-207ENST00000567806 PMFBP1Q8TBY8 1022 aa27.57■■■□□ 2
GTF3C1-207ENST00000567806 STAC3Q96MF2 364 aa27.57■■■□□ 2
GTF3C1-207ENST00000567806 HRCP23327 699 aa27.56■■■□□ 2
GTF3C1-207ENST00000567806 CABLES1Q8TDN4 633 aa27.56■■■□□ 2
GTF3C1-207ENST00000567806 SBNO1A3KN83 1393 aa27.55■■■□□ 2
GTF3C1-207ENST00000567806 TNS3Q68CZ2 1445 aa27.55■■■□□ 2
GTF3C1-207ENST00000567806 DLC1Q96QB1 1528 aa27.55■■■□□ 2
GTF3C1-207ENST00000567806 MARF1Q9Y4F3 1742 aaKnown RBP27.55■■■□□ 2
GTF3C1-207ENST00000567806 HIRIP3Q9BW71 556 aaPredicted RBP27.54■■■□□ 2
GTF3C1-207ENST00000567806 MINK1Q8N4C8 1332 aaPredicted RBP27.52■■■□□ 2
GTF3C1-207ENST00000567806 CCDC125Q86Z20 511 aa27.52■■■□□ 2
GTF3C1-207ENST00000567806 RGPD8O14715 1765 aaPredicted RBP27.52■■■□□ 2
GTF3C1-207ENST00000567806 SLIT2O94813 1529 aa27.51■■■□□ 2
GTF3C1-207ENST00000567806 ANKARQ7Z5J8 1434 aa27.51■■□□□ 1.99
GTF3C1-207ENST00000567806 ARHGEF10O15013 1369 aa27.51■■□□□ 1.99
GTF3C1-207ENST00000567806 ADGRB1O14514 1584 aa27.48■■□□□ 1.99
GTF3C1-207ENST00000567806 EIF3AQ14152 1382 aaKnown RBP27.48■■□□□ 1.99
GTF3C1-207ENST00000567806 RALGAPBQ86X10 1494 aa27.47■■□□□ 1.99
GTF3C1-207ENST00000567806 WASLO00401 505 aaPredicted RBP27.47■■□□□ 1.99
GTF3C1-207ENST00000567806 CCDC9Q9Y3X0 531 aaKnown RBP27.47■■□□□ 1.99
GTF3C1-207ENST00000567806 GPRASP1Q5JY77 1395 aa27.47■■□□□ 1.99
GTF3C1-207ENST00000567806 VPS72Q15906 364 aa27.46■■□□□ 1.99
GTF3C1-207ENST00000567806 USP32Q8NFA0 1604 aa27.45■■□□□ 1.99
GTF3C1-207ENST00000567806 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.44■■□□□ 1.98
GTF3C1-207ENST00000567806 FAM83GA6ND36 823 aa27.43■■□□□ 1.98
GTF3C1-207ENST00000567806 NGDNQ8NEJ9 315 aaKnown RBP27.43■■□□□ 1.98
GTF3C1-207ENST00000567806 SEPT12Q8IYM1 358 aa27.42■■□□□ 1.98
GTF3C1-207ENST00000567806 ZRANB1Q9UGI0 708 aa27.42■■□□□ 1.98
GTF3C1-207ENST00000567806 ADGRB2O60241 1585 aa27.42■■□□□ 1.98
GTF3C1-207ENST00000567806 PRR36Q9H6K5 1346 aa27.41■■□□□ 1.98
GTF3C1-207ENST00000567806 GLI3P10071 1580 aa27.39■■□□□ 1.98
GTF3C1-207ENST00000567806 PAK3O75914 559 aaPredicted RBP27.39■■□□□ 1.98
GTF3C1-207ENST00000567806 TULP4Q9NRJ4 1543 aa27.37■■□□□ 1.97
GTF3C1-207ENST00000567806 ONECUT3O60422 494 aaPredicted RBP27.37■■□□□ 1.97
GTF3C1-207ENST00000567806 NUDT16Q96DE0 195 aaKnown RBP27.35■■□□□ 1.97
GTF3C1-207ENST00000567806 BTG4Q9NY30 223 aa27.35■■□□□ 1.97
GTF3C1-207ENST00000567806 SF3B2Q13435 895 aaKnown RBP27.34■■□□□ 1.97
GTF3C1-207ENST00000567806 EP400Q96L91 3159 aa27.34■■□□□ 1.97
GTF3C1-207ENST00000567806 A0A0G2JS52 829 aa27.33■■□□□ 1.97
GTF3C1-207ENST00000567806 MYT1Q01538 1121 aa27.33■■□□□ 1.97
GTF3C1-207ENST00000567806 BLMP54132 1417 aaPredicted RBP27.33■■□□□ 1.96
GTF3C1-207ENST00000567806 KRT27Q7Z3Y8 459 aa27.32■■□□□ 1.96
GTF3C1-207ENST00000567806 CDK19Q9BWU1 502 aa27.32■■□□□ 1.96
GTF3C1-207ENST00000567806 NWD2Q9ULI1 1742 aa27.32■■□□□ 1.96
GTF3C1-207ENST00000567806 PLCH1Q4KWH8 1693 aa27.3■■□□□ 1.96
GTF3C1-207ENST00000567806 TRPM3Q9HCF6 1732 aaPredicted RBP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms