RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 KNSTRNQ9Y448 316 aa14.79□□□□□ -0.04
VPS9D1-206ENST00000567379 ABCC11Q96J66 1382 aa14.77□□□□□ -0.04
VPS9D1-206ENST00000567379 MYBBP1AQ9BQG0 1328 aaKnown RBP14.77□□□□□ -0.04
VPS9D1-206ENST00000567379 PRAM1Q96QH2 718 aa14.77□□□□□ -0.05
VPS9D1-206ENST00000567379 SAFB2Q14151 953 aaKnown RBP eCLIP14.76□□□□□ -0.05
VPS9D1-206ENST00000567379 CEP170BQ9Y4F5 1589 aaPredicted RBP14.76□□□□□ -0.05
VPS9D1-206ENST00000567379 TULP4Q9NRJ4 1543 aa14.76□□□□□ -0.05
VPS9D1-206ENST00000567379 PARD3Q8TEW0 1356 aa14.75□□□□□ -0.05
VPS9D1-206ENST00000567379 LTKP29376 864 aa14.75□□□□□ -0.05
VPS9D1-206ENST00000567379 SIRT1Q96EB6 747 aa14.75□□□□□ -0.05
VPS9D1-206ENST00000567379 KNDC1Q76NI1 1749 aa14.75□□□□□ -0.05
VPS9D1-206ENST00000567379 METP08581 1390 aa14.74□□□□□ -0.05
VPS9D1-206ENST00000567379 CCDC184Q52MB2 194 aa14.74□□□□□ -0.05
VPS9D1-206ENST00000567379 CC2D1BQ5T0F9 858 aaKnown RBP14.74□□□□□ -0.05
VPS9D1-206ENST00000567379 BRD4O60885 1362 aaPredicted RBP14.73□□□□□ -0.05
VPS9D1-206ENST00000567379 MINK1Q8N4C8 1332 aaPredicted RBP14.73□□□□□ -0.05
VPS9D1-206ENST00000567379 HSPA1LP34931 641 aa14.73□□□□□ -0.05
VPS9D1-206ENST00000567379 TMC1Q8TDI8 760 aa14.73□□□□□ -0.05
VPS9D1-206ENST00000567379 ZNF142P52746 1687 aaPredicted RBP14.73□□□□□ -0.05
VPS9D1-206ENST00000567379 ADAMTS13Q76LX8 1427 aa14.73□□□□□ -0.05
VPS9D1-206ENST00000567379 NPC1L1Q9UHC9 1359 aa14.73□□□□□ -0.05
VPS9D1-206ENST00000567379 SRPK2P78362 688 aaKnown RBP14.72□□□□□ -0.05
VPS9D1-206ENST00000567379 TECPR2O15040 1411 aa14.72□□□□□ -0.05
VPS9D1-206ENST00000567379 FAM135BQ49AJ0 1406 aa14.72□□□□□ -0.05
VPS9D1-206ENST00000567379 ATAD2Q6PL18 1390 aa14.72□□□□□ -0.05
VPS9D1-206ENST00000567379 NINLQ9Y2I6 1382 aa14.72□□□□□ -0.05
VPS9D1-206ENST00000567379 ZNF335Q9H4Z2 1342 aaPredicted RBP14.71□□□□□ -0.05
VPS9D1-206ENST00000567379 NLRP13Q86W25 1043 aa14.71□□□□□ -0.05
VPS9D1-206ENST00000567379 DIP2AQ14689 1571 aa14.71□□□□□ -0.05
VPS9D1-206ENST00000567379 MED14O60244 1454 aa14.7□□□□□ -0.06
VPS9D1-206ENST00000567379 AMER1Q5JTC6 1135 aaPredicted RBP14.7□□□□□ -0.06
VPS9D1-206ENST00000567379 FAM9BQ8IZU0 186 aa14.7□□□□□ -0.06
VPS9D1-206ENST00000567379 CABP2Q9NPB3 220 aa14.7□□□□□ -0.06
VPS9D1-206ENST00000567379 TBX22Q9Y458 520 aa14.7□□□□□ -0.06
VPS9D1-206ENST00000567379 CPS1P31327 1500 aa14.7□□□□□ -0.06
VPS9D1-206ENST00000567379 SCAF1Q9H7N4 1312 aaKnown RBP14.69□□□□□ -0.06
VPS9D1-206ENST00000567379 WAPLQ7Z5K2 1190 aa14.69□□□□□ -0.06
VPS9D1-206ENST00000567379 SLC12A5Q9H2X9 1139 aa14.69□□□□□ -0.06
VPS9D1-206ENST00000567379 CDK19Q9BWU1 502 aa14.68□□□□□ -0.06
VPS9D1-206ENST00000567379 HNRNPUQ00839 825 aaKnown RBP eCLIP14.67□□□□□ -0.06
VPS9D1-206ENST00000567379 ANKLE2Q86XL3 938 aa14.67□□□□□ -0.06
VPS9D1-206ENST00000567379 SLC26A8Q96RN1 970 aa14.67□□□□□ -0.06
VPS9D1-206ENST00000567379 CARD14Q9BXL6 1004 aa14.67□□□□□ -0.06
VPS9D1-206ENST00000567379 ANKRD36BQ8N2N9 1353 aa14.67□□□□□ -0.06
VPS9D1-206ENST00000567379 PLEKHH1Q9ULM0 1364 aa14.67□□□□□ -0.06
VPS9D1-206ENST00000567379 USP32Q8NFA0 1604 aa14.66□□□□□ -0.06
VPS9D1-206ENST00000567379 NSD3Q9BZ95 1437 aa14.66□□□□□ -0.06
VPS9D1-206ENST00000567379 PNISRQ8TF01 805 aaKnown RBP14.65□□□□□ -0.06
VPS9D1-206ENST00000567379 TERF2IPQ9NYB0 399 aa14.65□□□□□ -0.06
VPS9D1-206ENST00000567379 WASLO00401 505 aaPredicted RBP14.64□□□□□ -0.07
VPS9D1-206ENST00000567379 TOM1O60784 492 aa14.64□□□□□ -0.07
VPS9D1-206ENST00000567379 PIP4K2BP78356 416 aa14.64□□□□□ -0.07
VPS9D1-206ENST00000567379 PIK3R4Q99570 1358 aa14.63□□□□□ -0.07
VPS9D1-206ENST00000567379 PPP2R1AP30153 589 aa14.63□□□□□ -0.07
VPS9D1-206ENST00000567379 CGNL1Q0VF96 1302 aa14.63□□□□□ -0.07
VPS9D1-206ENST00000567379 ROBO2Q9HCK4 1378 aa14.62□□□□□ -0.07
VPS9D1-206ENST00000567379 HDGFL2Q7Z4V5 671 aaPredicted RBP14.62□□□□□ -0.07
VPS9D1-206ENST00000567379 PTPRUQ92729 1446 aa14.62□□□□□ -0.07
VPS9D1-206ENST00000567379 AMOTL2Q9Y2J4 779 aa14.62□□□□□ -0.07
VPS9D1-206ENST00000567379 NSD2O96028 1365 aa14.61□□□□□ -0.07
VPS9D1-206ENST00000567379 PTCH1Q13635 1447 aa14.61□□□□□ -0.07
VPS9D1-206ENST00000567379 MORC1Q86VD1 984 aa14.6□□□□□ -0.07
VPS9D1-206ENST00000567379 NCKAP5LQ9HCH0 1330 aa14.6□□□□□ -0.07
VPS9D1-206ENST00000567379 ADGRB2O60241 1585 aa14.6□□□□□ -0.07
VPS9D1-206ENST00000567379 A0A1W2PP64 1363 aa14.6□□□□□ -0.07
VPS9D1-206ENST00000567379 XRN1Q8IZH2 1706 aaKnown RBP14.58□□□□□ -0.07
VPS9D1-206ENST00000567379 ATP7BP35670 1465 aa14.58□□□□□ -0.08
VPS9D1-206ENST00000567379 NUDT16Q96DE0 195 aaKnown RBP14.58□□□□□ -0.08
VPS9D1-206ENST00000567379 CABP1Q9NZU7 370 aa14.58□□□□□ -0.08
VPS9D1-206ENST00000567379 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.58□□□□□ -0.08
VPS9D1-206ENST00000567379 ZBED9Q6R2W3 1325 aa14.57□□□□□ -0.08
VPS9D1-206ENST00000567379 INSRP06213 1382 aa14.57□□□□□ -0.08
VPS9D1-206ENST00000567379 NPHP4O75161 1426 aaPredicted RBP14.57□□□□□ -0.08
VPS9D1-206ENST00000567379 PPIP5K1Q6PFW1 1433 aa14.56□□□□□ -0.08
VPS9D1-206ENST00000567379 CD163L1Q9NR16 1453 aa14.56□□□□□ -0.08
VPS9D1-206ENST00000567379 GTF3C3Q9Y5Q9 886 aa14.55□□□□□ -0.08
VPS9D1-206ENST00000567379 CCDC61Q9Y6R9 512 aa14.55□□□□□ -0.08
VPS9D1-206ENST00000567379 CHD2O14647 1828 aaKnown RBP14.55□□□□□ -0.08
VPS9D1-206ENST00000567379 WDR43Q15061 677 aaKnown RBP eCLIP14.54□□□□□ -0.08
VPS9D1-206ENST00000567379 ANKRD26Q9UPS8 1709 aa14.53□□□□□ -0.08
VPS9D1-206ENST00000567379 KIF20BQ96Q89 1820 aa14.52□□□□□ -0.08
VPS9D1-206ENST00000567379 ITSN1Q15811 1721 aa14.52□□□□□ -0.08
VPS9D1-206ENST00000567379 CDC42BPGQ6DT37 1551 aa14.52□□□□□ -0.08
VPS9D1-206ENST00000567379 KCNA6P17658 529 aa14.52□□□□□ -0.09
VPS9D1-206ENST00000567379 CPSF1Q10570 1443 aaKnown RBP14.51□□□□□ -0.09
VPS9D1-206ENST00000567379 POLR3AO14802 1390 aaPredicted RBP14.51□□□□□ -0.09
VPS9D1-206ENST00000567379 ZNF692Q9BU19 519 aaPredicted RBP14.51□□□□□ -0.09
VPS9D1-206ENST00000567379 EDC4Q6P2E9 1401 aaKnown RBP14.5□□□□□ -0.09
VPS9D1-206ENST00000567379 AKAP12Q02952 1782 aa14.5□□□□□ -0.09
VPS9D1-206ENST00000567379 PRR36Q9H6K5 1346 aa14.5□□□□□ -0.09
VPS9D1-206ENST00000567379 TOPAZ1Q8N9V7 1692 aa14.5□□□□□ -0.09
VPS9D1-206ENST00000567379 FYB1O15117 783 aa14.5□□□□□ -0.09
VPS9D1-206ENST00000567379 TNNT2P45379 298 aaPredicted RBP14.5□□□□□ -0.09
VPS9D1-206ENST00000567379 CFAP53Q96M91 514 aa14.5□□□□□ -0.09
VPS9D1-206ENST00000567379 BLMP54132 1417 aaPredicted RBP14.49□□□□□ -0.09
VPS9D1-206ENST00000567379 PLEKHG3A1L390 1219 aa14.49□□□□□ -0.09
VPS9D1-206ENST00000567379 GGNBP2Q9H3C7 697 aa14.49□□□□□ -0.09
VPS9D1-206ENST00000567379 RGS17Q9UGC6 210 aaPredicted RBP14.49□□□□□ -0.09
VPS9D1-206ENST00000567379 MON2Q7Z3U7 1717 aa14.49□□□□□ -0.09
VPS9D1-206ENST00000567379 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms