RNA–Protein interactions for RNA: ENST00000566219.1

EDC3-210, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-210ENST00000566219 PPLO60437 1756 aa23.96■■□□□ 1.43
EDC3-210ENST00000566219 HFM1A2PYH4 1435 aa23.94■■□□□ 1.42
EDC3-210ENST00000566219 PXDNQ92626 1479 aa23.94■■□□□ 1.42
EDC3-210ENST00000566219 PPARGC1BQ86YN6 1023 aaKnown RBP23.92■■□□□ 1.42
EDC3-210ENST00000566219 ZRANB1Q9UGI0 708 aa23.92■■□□□ 1.42
EDC3-210ENST00000566219 VGFO15240 615 aaPredicted RBP23.91■■□□□ 1.42
EDC3-210ENST00000566219 BCL9LQ86UU0 1499 aa23.91■■□□□ 1.42
EDC3-210ENST00000566219 NPHP3Q7Z494 1330 aa23.9■■□□□ 1.42
EDC3-210ENST00000566219 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.89■■□□□ 1.41
EDC3-210ENST00000566219 XPCQ01831 940 aaPredicted RBP23.88■■□□□ 1.41
EDC3-210ENST00000566219 FOXD1Q16676 465 aa23.88■■□□□ 1.41
EDC3-210ENST00000566219 ESCO1Q5FWF5 840 aa23.88■■□□□ 1.41
EDC3-210ENST00000566219 NAIPQ13075 1403 aa23.87■■□□□ 1.41
EDC3-210ENST00000566219 GLI3P10071 1580 aa23.84■■□□□ 1.41
EDC3-210ENST00000566219 RPGRIP1LQ68CZ1 1315 aa23.84■■□□□ 1.41
EDC3-210ENST00000566219 FOXO3O43524 673 aa23.82■■□□□ 1.4
EDC3-210ENST00000566219 GJD4Q96KN9 370 aaPredicted RBP23.82■■□□□ 1.4
EDC3-210ENST00000566219 NUTM2FA1L443 756 aa23.81■■□□□ 1.4
EDC3-210ENST00000566219 CCDC125Q86Z20 511 aa23.81■■□□□ 1.4
EDC3-210ENST00000566219 BRWD3Q6RI45 1802 aa23.81■■□□□ 1.4
EDC3-210ENST00000566219 RALGAPBQ86X10 1494 aa23.81■■□□□ 1.4
EDC3-210ENST00000566219 KNDC1Q76NI1 1749 aa23.8■■□□□ 1.4
EDC3-210ENST00000566219 FMN2Q9NZ56 1722 aa23.8■■□□□ 1.4
EDC3-210ENST00000566219 USP32Q8NFA0 1604 aa23.8■■□□□ 1.4
EDC3-210ENST00000566219 KIF1AQ12756 1690 aa23.79■■□□□ 1.4
EDC3-210ENST00000566219 LRPPRCP42704 1394 aaKnown RBP23.78■■□□□ 1.4
EDC3-210ENST00000566219 RRBP1Q9P2E9 1410 aaKnown RBP23.78■■□□□ 1.4
EDC3-210ENST00000566219 SLIT2O94813 1529 aa23.78■■□□□ 1.4
EDC3-210ENST00000566219 TECPR2O15040 1411 aa23.76■■□□□ 1.39
EDC3-210ENST00000566219 BLMP54132 1417 aaPredicted RBP23.76■■□□□ 1.39
EDC3-210ENST00000566219 IFT172Q9UG01 1749 aa23.76■■□□□ 1.39
EDC3-210ENST00000566219 SLC4A1APQ9BWU0 796 aaKnown RBP23.75■■□□□ 1.39
EDC3-210ENST00000566219 STK26Q9P289 416 aa23.75■■□□□ 1.39
EDC3-210ENST00000566219 PLCH1Q4KWH8 1693 aa23.74■■□□□ 1.39
EDC3-210ENST00000566219 WAPLQ7Z5K2 1190 aa23.74■■□□□ 1.39
EDC3-210ENST00000566219 UNC5CLQ8IV45 518 aa23.74■■□□□ 1.39
EDC3-210ENST00000566219 ADGRF5Q8IZF2 1346 aa23.74■■□□□ 1.39
EDC3-210ENST00000566219 PLEKHH1Q9ULM0 1364 aa23.74■■□□□ 1.39
EDC3-210ENST00000566219 CCDC144AA2RUR9 1427 aa23.73■■□□□ 1.39
EDC3-210ENST00000566219 SPATA31A3Q5VYP0 1347 aa23.72■■□□□ 1.39
EDC3-210ENST00000566219 ABCA3Q99758 1704 aa23.71■■□□□ 1.39
EDC3-210ENST00000566219 DEFB132Q7Z7B7 95 aa23.7■■□□□ 1.38
EDC3-210ENST00000566219 RGPD8O14715 1765 aaPredicted RBP23.7■■□□□ 1.38
EDC3-210ENST00000566219 NWD2Q9ULI1 1742 aa23.68■■□□□ 1.38
EDC3-210ENST00000566219 LRP5O75197 1615 aa23.68■■□□□ 1.38
EDC3-210ENST00000566219 TNS3Q68CZ2 1445 aa23.67■■□□□ 1.38
EDC3-210ENST00000566219 ABCC11Q96J66 1382 aa23.66■■□□□ 1.38
EDC3-210ENST00000566219 HAP1P54257 671 aaPredicted RBP23.66■■□□□ 1.38
EDC3-210ENST00000566219 TMEM132EQ6IEE7 984 aa23.66■■□□□ 1.38
EDC3-210ENST00000566219 PIK3C2GO75747 1445 aa23.66■■□□□ 1.38
EDC3-210ENST00000566219 SPATA31E1Q6ZUB1 1445 aa23.66■■□□□ 1.38
EDC3-210ENST00000566219 PLEKHG5O94827 1062 aa23.65■■□□□ 1.38
EDC3-210ENST00000566219 SF3B2Q13435 895 aaKnown RBP23.65■■□□□ 1.38
EDC3-210ENST00000566219 RGL3Q3MIN7 710 aa23.65■■□□□ 1.38
EDC3-210ENST00000566219 SEPT12Q8IYM1 358 aa23.65■■□□□ 1.38
EDC3-210ENST00000566219 KRT28Q7Z3Y7 464 aa23.64■■□□□ 1.37
EDC3-210ENST00000566219 YTHDC2Q9H6S0 1430 aaKnown RBP23.64■■□□□ 1.37
EDC3-210ENST00000566219 ANKRD30BQ9BXX2 1392 aa23.64■■□□□ 1.37
EDC3-210ENST00000566219 CABLES1Q8TDN4 633 aa23.62■■□□□ 1.37
EDC3-210ENST00000566219 CCDC9Q9Y3X0 531 aaKnown RBP23.62■■□□□ 1.37
EDC3-210ENST00000566219 VPS72Q15906 364 aa23.61■■□□□ 1.37
EDC3-210ENST00000566219 NRAPQ86VF7 1730 aa23.6■■□□□ 1.37
EDC3-210ENST00000566219 PHF8Q9UPP1 1060 aa23.59■■□□□ 1.37
EDC3-210ENST00000566219 NRXN1Q9ULB1 1477 aa23.59■■□□□ 1.37
EDC3-210ENST00000566219 LMOD2Q6P5Q4 547 aa23.57■■□□□ 1.36
EDC3-210ENST00000566219 KRT27Q7Z3Y8 459 aa23.57■■□□□ 1.36
EDC3-210ENST00000566219 A0A0G2JS52 829 aa23.56■■□□□ 1.36
EDC3-210ENST00000566219 MYT1Q01538 1121 aa23.56■■□□□ 1.36
EDC3-210ENST00000566219 PSME1Q06323 249 aa23.56■■□□□ 1.36
EDC3-210ENST00000566219 SBNO1A3KN83 1393 aa23.55■■□□□ 1.36
EDC3-210ENST00000566219 ARHGEF10O15013 1369 aa23.55■■□□□ 1.36
EDC3-210ENST00000566219 PSDA5PKW4 1024 aaPredicted RBP23.54■■□□□ 1.36
EDC3-210ENST00000566219 TRPM3Q9HCF6 1732 aaPredicted RBP23.53■■□□□ 1.36
EDC3-210ENST00000566219 ONECUT3O60422 494 aaPredicted RBP23.52■■□□□ 1.36
EDC3-210ENST00000566219 RGPD1P0DJD0 1748 aa23.52■■□□□ 1.36
EDC3-210ENST00000566219 BAG6P46379 1132 aa23.51■■□□□ 1.35
EDC3-210ENST00000566219 SAFB2Q14151 953 aaKnown RBP eCLIP23.51■■□□□ 1.35
EDC3-210ENST00000566219 COL14A1Q05707 1796 aaKnown RBP23.5■■□□□ 1.35
EDC3-210ENST00000566219 FAM83GA6ND36 823 aa23.49■■□□□ 1.35
EDC3-210ENST00000566219 FAM98CQ17RN3 349 aaKnown RBP23.49■■□□□ 1.35
EDC3-210ENST00000566219 SIRT1Q96EB6 747 aa23.49■■□□□ 1.35
EDC3-210ENST00000566219 ADGRB2O60241 1585 aa23.48■■□□□ 1.35
EDC3-210ENST00000566219 ALS2Q96Q42 1657 aa23.48■■□□□ 1.35
EDC3-210ENST00000566219 PMFBP1Q8TBY8 1022 aa23.48■■□□□ 1.35
EDC3-210ENST00000566219 PRAM1Q96QH2 718 aa23.47■■□□□ 1.35
EDC3-210ENST00000566219 MPHOSPH9Q99550 1183 aa23.47■■□□□ 1.35
EDC3-210ENST00000566219 DHX57Q6P158 1386 aaKnown RBP23.47■■□□□ 1.35
EDC3-210ENST00000566219 ANKARQ7Z5J8 1434 aa23.47■■□□□ 1.35
EDC3-210ENST00000566219 HRCP23327 699 aa23.46■■□□□ 1.35
EDC3-210ENST00000566219 CFAP70Q5T0N1 1121 aa23.46■■□□□ 1.35
EDC3-210ENST00000566219 C14orf93Q9H972 538 aaKnown RBP23.46■■□□□ 1.35
EDC3-210ENST00000566219 TNS1Q9HBL0 1735 aaKnown RBP23.46■■□□□ 1.35
EDC3-210ENST00000566219 CRYBG1Q9Y4K1 1723 aa23.45■■□□□ 1.34
EDC3-210ENST00000566219 DLC1Q96QB1 1528 aa23.45■■□□□ 1.34
EDC3-210ENST00000566219 BTG4Q9NY30 223 aa23.44■■□□□ 1.34
EDC3-210ENST00000566219 THSD7AQ9UPZ6 1657 aa23.44■■□□□ 1.34
EDC3-210ENST00000566219 EN1Q05925 392 aaPredicted RBP23.42■■□□□ 1.34
EDC3-210ENST00000566219 FAM182BQ5T319 152 aa23.42■■□□□ 1.34
EDC3-210ENST00000566219 POGKQ9P215 609 aa23.4■■□□□ 1.34
EDC3-210ENST00000566219 TULP4Q9NRJ4 1543 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms