RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 CCDC144AA2RUR9 1427 aa17.39■□□□□ 0.38
NSMCE1-209ENST00000565384 ADGRF5Q8IZF2 1346 aa17.39■□□□□ 0.37
NSMCE1-209ENST00000565384 USP21Q9UK80 565 aa17.37■□□□□ 0.37
NSMCE1-209ENST00000565384 NPHP3Q7Z494 1330 aa17.37■□□□□ 0.37
NSMCE1-209ENST00000565384 SPATA31E1Q6ZUB1 1445 aa17.37■□□□□ 0.37
NSMCE1-209ENST00000565384 ESCO1Q5FWF5 840 aa17.36■□□□□ 0.37
NSMCE1-209ENST00000565384 TECPR2O15040 1411 aa17.36■□□□□ 0.37
NSMCE1-209ENST00000565384 MYOM2P54296 1465 aa17.36■□□□□ 0.37
NSMCE1-209ENST00000565384 PXDNQ92626 1479 aa17.36■□□□□ 0.37
NSMCE1-209ENST00000565384 IFT172Q9UG01 1749 aa17.35■□□□□ 0.37
NSMCE1-209ENST00000565384 RGL3Q3MIN7 710 aa17.35■□□□□ 0.37
NSMCE1-209ENST00000565384 TRPC5Q9UL62 973 aaPredicted RBP17.35■□□□□ 0.37
NSMCE1-209ENST00000565384 ANKRD30BQ9BXX2 1392 aa17.35■□□□□ 0.37
NSMCE1-209ENST00000565384 LRPPRCP42704 1394 aaKnown RBP17.34■□□□□ 0.37
NSMCE1-209ENST00000565384 FNBP4Q8N3X1 1017 aaPredicted RBP17.34■□□□□ 0.37
NSMCE1-209ENST00000565384 STK26Q9P289 416 aa17.34■□□□□ 0.37
NSMCE1-209ENST00000565384 KNDC1Q76NI1 1749 aa17.33■□□□□ 0.37
NSMCE1-209ENST00000565384 WAPLQ7Z5K2 1190 aa17.33■□□□□ 0.36
NSMCE1-209ENST00000565384 PIK3C2GO75747 1445 aa17.32■□□□□ 0.36
NSMCE1-209ENST00000565384 ATRNO75882 1429 aa17.32■□□□□ 0.36
NSMCE1-209ENST00000565384 PLEKHH1Q9ULM0 1364 aa17.32■□□□□ 0.36
NSMCE1-209ENST00000565384 XPCQ01831 940 aaPredicted RBP17.32■□□□□ 0.36
NSMCE1-209ENST00000565384 MPHOSPH9Q99550 1183 aa17.32■□□□□ 0.36
NSMCE1-209ENST00000565384 ATAD2Q6PL18 1390 aa17.31■□□□□ 0.36
NSMCE1-209ENST00000565384 ABCC11Q96J66 1382 aa17.31■□□□□ 0.36
NSMCE1-209ENST00000565384 NUTM2FA1L443 756 aa17.31■□□□□ 0.36
NSMCE1-209ENST00000565384 FOXO3O43524 673 aa17.31■□□□□ 0.36
NSMCE1-209ENST00000565384 TMEM132EQ6IEE7 984 aa17.31■□□□□ 0.36
NSMCE1-209ENST00000565384 MARF1Q9Y4F3 1742 aaKnown RBP17.29■□□□□ 0.36
NSMCE1-209ENST00000565384 YTHDC2Q9H6S0 1430 aaKnown RBP17.29■□□□□ 0.36
NSMCE1-209ENST00000565384 FMN2Q9NZ56 1722 aa17.28■□□□□ 0.36
NSMCE1-209ENST00000565384 BCL9LQ86UU0 1499 aa17.28■□□□□ 0.36
NSMCE1-209ENST00000565384 KIF1AQ12756 1690 aa17.26■□□□□ 0.35
NSMCE1-209ENST00000565384 SPATA31A3Q5VYP0 1347 aa17.23■□□□□ 0.35
NSMCE1-209ENST00000565384 SIRT1Q96EB6 747 aa17.23■□□□□ 0.35
NSMCE1-209ENST00000565384 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.23■□□□□ 0.35
NSMCE1-209ENST00000565384 NRXN1Q9ULB1 1477 aa17.23■□□□□ 0.35
NSMCE1-209ENST00000565384 GJD4Q96KN9 370 aaPredicted RBP17.22■□□□□ 0.35
NSMCE1-209ENST00000565384 C14orf93Q9H972 538 aaKnown RBP17.22■□□□□ 0.35
NSMCE1-209ENST00000565384 SLIT2O94813 1529 aa17.21■□□□□ 0.35
NSMCE1-209ENST00000565384 KRT28Q7Z3Y7 464 aa17.21■□□□□ 0.35
NSMCE1-209ENST00000565384 USP32Q8NFA0 1604 aa17.21■□□□□ 0.35
NSMCE1-209ENST00000565384 DHX57Q6P158 1386 aaKnown RBP17.2■□□□□ 0.34
NSMCE1-209ENST00000565384 CFAP70Q5T0N1 1121 aa17.2■□□□□ 0.34
NSMCE1-209ENST00000565384 TNS3Q68CZ2 1445 aa17.2■□□□□ 0.34
NSMCE1-209ENST00000565384 ACIN1Q9UKV3 1341 aaKnown RBP17.2■□□□□ 0.34
NSMCE1-209ENST00000565384 UNC5CLQ8IV45 518 aa17.19■□□□□ 0.34
NSMCE1-209ENST00000565384 PHF8Q9UPP1 1060 aa17.19■□□□□ 0.34
NSMCE1-209ENST00000565384 GLI3P10071 1580 aa17.19■□□□□ 0.34
NSMCE1-209ENST00000565384 RALGAPBQ86X10 1494 aa17.18■□□□□ 0.34
NSMCE1-209ENST00000565384 RGPD8O14715 1765 aaPredicted RBP17.18■□□□□ 0.34
NSMCE1-209ENST00000565384 PRAM1Q96QH2 718 aa17.17■□□□□ 0.34
NSMCE1-209ENST00000565384 HAP1P54257 671 aaPredicted RBP17.16■□□□□ 0.34
NSMCE1-209ENST00000565384 PSME1Q06323 249 aa17.16■□□□□ 0.34
NSMCE1-209ENST00000565384 SAFB2Q14151 953 aaKnown RBP eCLIP17.16■□□□□ 0.34
NSMCE1-209ENST00000565384 CCDC125Q86Z20 511 aa17.16■□□□□ 0.34
NSMCE1-209ENST00000565384 DLC1Q96QB1 1528 aa17.16■□□□□ 0.34
NSMCE1-209ENST00000565384 SBNO1A3KN83 1393 aa17.15■□□□□ 0.34
NSMCE1-209ENST00000565384 CABLES1Q8TDN4 633 aa17.14■□□□□ 0.33
NSMCE1-209ENST00000565384 ZRANB1Q9UGI0 708 aa17.14■□□□□ 0.33
NSMCE1-209ENST00000565384 ANKARQ7Z5J8 1434 aa17.13■□□□□ 0.33
NSMCE1-209ENST00000565384 ABCA3Q99758 1704 aa17.13■□□□□ 0.33
NSMCE1-209ENST00000565384 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
NSMCE1-209ENST00000565384 POGKQ9P215 609 aa17.13■□□□□ 0.33
NSMCE1-209ENST00000565384 ADGRB2O60241 1585 aa17.13■□□□□ 0.33
NSMCE1-209ENST00000565384 PLCH1Q4KWH8 1693 aa17.13■□□□□ 0.33
NSMCE1-209ENST00000565384 ARHGEF10O15013 1369 aa17.13■□□□□ 0.33
NSMCE1-209ENST00000565384 RAB3GAP2Q9H2M9 1393 aa17.13■□□□□ 0.33
NSMCE1-209ENST00000565384 ADGRB1O14514 1584 aa17.12■□□□□ 0.33
NSMCE1-209ENST00000565384 LMOD2Q6P5Q4 547 aa17.12■□□□□ 0.33
NSMCE1-209ENST00000565384 NWD2Q9ULI1 1742 aa17.11■□□□□ 0.33
NSMCE1-209ENST00000565384 VPS72Q15906 364 aa17.11■□□□□ 0.33
NSMCE1-209ENST00000565384 BLMP54132 1417 aaPredicted RBP17.11■□□□□ 0.33
NSMCE1-209ENST00000565384 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
NSMCE1-209ENST00000565384 BRWD3Q6RI45 1802 aa17.1■□□□□ 0.33
NSMCE1-209ENST00000565384 SEPT12Q8IYM1 358 aa17.09■□□□□ 0.33
NSMCE1-209ENST00000565384 TRAK1Q9UPV9 953 aa17.08■□□□□ 0.32
NSMCE1-209ENST00000565384 CCDC9Q9Y3X0 531 aaKnown RBP17.08■□□□□ 0.32
NSMCE1-209ENST00000565384 EP400Q96L91 3159 aa17.08■□□□□ 0.32
NSMCE1-209ENST00000565384 TRPM3Q9HCF6 1732 aaPredicted RBP17.07■□□□□ 0.32
NSMCE1-209ENST00000565384 HIRIP3Q9BW71 556 aaPredicted RBP17.07■□□□□ 0.32
NSMCE1-209ENST00000565384 TULP4Q9NRJ4 1543 aa17.06■□□□□ 0.32
NSMCE1-209ENST00000565384 EIF3AQ14152 1382 aaKnown RBP17.06■□□□□ 0.32
NSMCE1-209ENST00000565384 NRAPQ86VF7 1730 aa17.05■□□□□ 0.32
NSMCE1-209ENST00000565384 MINK1Q8N4C8 1332 aaPredicted RBP17.05■□□□□ 0.32
NSMCE1-209ENST00000565384 PRR36Q9H6K5 1346 aa17.05■□□□□ 0.32
NSMCE1-209ENST00000565384 FAM83GA6ND36 823 aa17.05■□□□□ 0.32
NSMCE1-209ENST00000565384 ONECUT3O60422 494 aaPredicted RBP17.05■□□□□ 0.32
NSMCE1-209ENST00000565384 GPRASP1Q5JY77 1395 aa17.04■□□□□ 0.32
NSMCE1-209ENST00000565384 ALS2Q96Q42 1657 aa17.04■□□□□ 0.32
NSMCE1-209ENST00000565384 SF3B2Q13435 895 aaKnown RBP17.04■□□□□ 0.32
NSMCE1-209ENST00000565384 KRT27Q7Z3Y8 459 aa17.04■□□□□ 0.32
NSMCE1-209ENST00000565384 DEFB132Q7Z7B7 95 aa17.04■□□□□ 0.32
NSMCE1-209ENST00000565384 KDM2AQ9Y2K7 1162 aa17.04■□□□□ 0.32
NSMCE1-209ENST00000565384 DCAF11Q8TEB1 546 aa17.03■□□□□ 0.32
NSMCE1-209ENST00000565384 WASLO00401 505 aaPredicted RBP17.02■□□□□ 0.32
NSMCE1-209ENST00000565384 COL14A1Q05707 1796 aaKnown RBP17.02■□□□□ 0.31
NSMCE1-209ENST00000565384 A0A0G2JS52 829 aa17.01■□□□□ 0.31
NSMCE1-209ENST00000565384 MYT1Q01538 1121 aa17.01■□□□□ 0.31
NSMCE1-209ENST00000565384 BTG4Q9NY30 223 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms