RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 RALGAPBQ86X10 1494 aa24.56■■□□□ 1.52
RNF40-205ENST00000563909 HRCP23327 699 aa24.54■■□□□ 1.52
RNF40-205ENST00000563909 NPHP3Q7Z494 1330 aa24.54■■□□□ 1.52
RNF40-205ENST00000563909 NUP155O75694 1391 aa24.54■■□□□ 1.52
RNF40-205ENST00000563909 MARF1Q9Y4F3 1742 aaKnown RBP24.53■■□□□ 1.52
RNF40-205ENST00000563909 XPCQ01831 940 aaPredicted RBP24.53■■□□□ 1.52
RNF40-205ENST00000563909 ESCO1Q5FWF5 840 aa24.53■■□□□ 1.52
RNF40-205ENST00000563909 GLI3P10071 1580 aa24.53■■□□□ 1.52
RNF40-205ENST00000563909 ROBO2Q9HCK4 1378 aa24.53■■□□□ 1.52
RNF40-205ENST00000563909 SEPT12Q8IYM1 358 aa24.52■■□□□ 1.52
RNF40-205ENST00000563909 FOXO3O43524 673 aa24.5■■□□□ 1.51
RNF40-205ENST00000563909 PXDNQ92626 1479 aa24.49■■□□□ 1.51
RNF40-205ENST00000563909 BRWD3Q6RI45 1802 aa24.49■■□□□ 1.51
RNF40-205ENST00000563909 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.48■■□□□ 1.51
RNF40-205ENST00000563909 SLIT2O94813 1529 aa24.46■■□□□ 1.51
RNF40-205ENST00000563909 SPHKAPQ2M3C7 1700 aa24.46■■□□□ 1.51
RNF40-205ENST00000563909 KRT27Q7Z3Y8 459 aa24.45■■□□□ 1.5
RNF40-205ENST00000563909 NEXMIFQ5QGS0 1516 aa24.45■■□□□ 1.5
RNF40-205ENST00000563909 BAG6P46379 1132 aa24.44■■□□□ 1.5
RNF40-205ENST00000563909 CCDC9Q9Y3X0 531 aaKnown RBP24.41■■□□□ 1.5
RNF40-205ENST00000563909 HFM1A2PYH4 1435 aa24.41■■□□□ 1.5
RNF40-205ENST00000563909 LRPPRCP42704 1394 aaKnown RBP24.41■■□□□ 1.5
RNF40-205ENST00000563909 ONECUT3O60422 494 aaPredicted RBP24.4■■□□□ 1.5
RNF40-205ENST00000563909 VPS72Q15906 364 aa24.4■■□□□ 1.5
RNF40-205ENST00000563909 ROCK1Q13464 1354 aa24.39■■□□□ 1.49
RNF40-205ENST00000563909 R3HDM1Q15032 1099 aaKnown RBP24.38■■□□□ 1.49
RNF40-205ENST00000563909 NUTM2FA1L443 756 aa24.37■■□□□ 1.49
RNF40-205ENST00000563909 VGFO15240 615 aaPredicted RBP24.37■■□□□ 1.49
RNF40-205ENST00000563909 YY1P25490 414 aa24.37■■□□□ 1.49
RNF40-205ENST00000563909 PRAG1Q86YV5 1406 aa24.36■■□□□ 1.49
RNF40-205ENST00000563909 EN1Q05925 392 aaPredicted RBP24.36■■□□□ 1.49
RNF40-205ENST00000563909 SPATA31A3Q5VYP0 1347 aa24.35■■□□□ 1.49
RNF40-205ENST00000563909 A0A0G2JS52 829 aa24.35■■□□□ 1.49
RNF40-205ENST00000563909 HAP1P54257 671 aaPredicted RBP24.35■■□□□ 1.49
RNF40-205ENST00000563909 MYT1Q01538 1121 aa24.35■■□□□ 1.49
RNF40-205ENST00000563909 CDC42BPGQ6DT37 1551 aa24.34■■□□□ 1.49
RNF40-205ENST00000563909 CLTCL1P53675 1640 aa24.33■■□□□ 1.49
RNF40-205ENST00000563909 USP32Q8NFA0 1604 aa24.32■■□□□ 1.48
RNF40-205ENST00000563909 PLEKHG5O94827 1062 aa24.32■■□□□ 1.48
RNF40-205ENST00000563909 KRT28Q7Z3Y7 464 aa24.3■■□□□ 1.48
RNF40-205ENST00000563909 CABLES1Q8TDN4 633 aa24.3■■□□□ 1.48
RNF40-205ENST00000563909 NAIPQ13075 1403 aa24.29■■□□□ 1.48
RNF40-205ENST00000563909 ITGAEP38570 1179 aa24.27■■□□□ 1.48
RNF40-205ENST00000563909 FAM98CQ17RN3 349 aaKnown RBP24.27■■□□□ 1.48
RNF40-205ENST00000563909 KIF1BO60333 1816 aa24.26■■□□□ 1.47
RNF40-205ENST00000563909 CCDC144AA2RUR9 1427 aa24.26■■□□□ 1.47
RNF40-205ENST00000563909 FAM182BQ5T319 152 aa24.25■■□□□ 1.47
RNF40-205ENST00000563909 WAPLQ7Z5K2 1190 aa24.25■■□□□ 1.47
RNF40-205ENST00000563909 PLCH1Q4KWH8 1693 aa24.24■■□□□ 1.47
RNF40-205ENST00000563909 STK26Q9P289 416 aa24.23■■□□□ 1.47
RNF40-205ENST00000563909 NWD2Q9ULI1 1742 aa24.23■■□□□ 1.47
RNF40-205ENST00000563909 RPGRIP1LQ68CZ1 1315 aa24.22■■□□□ 1.47
RNF40-205ENST00000563909 FAM83GA6ND36 823 aa24.22■■□□□ 1.47
RNF40-205ENST00000563909 EZH2Q15910 746 aaKnown RBP24.21■■□□□ 1.47
RNF40-205ENST00000563909 LMOD2Q6P5Q4 547 aa24.21■■□□□ 1.47
RNF40-205ENST00000563909 PSME1Q06323 249 aa24.2■■□□□ 1.46
RNF40-205ENST00000563909 RGPD1P0DJD0 1748 aa24.2■■□□□ 1.46
RNF40-205ENST00000563909 TNS3Q68CZ2 1445 aa24.19■■□□□ 1.46
RNF40-205ENST00000563909 KIF1AQ12756 1690 aa24.17■■□□□ 1.46
RNF40-205ENST00000563909 DISP2A7MBM2 1401 aa24.17■■□□□ 1.46
RNF40-205ENST00000563909 BTG4Q9NY30 223 aa24.16■■□□□ 1.46
RNF40-205ENST00000563909 PHF8Q9UPP1 1060 aa24.15■■□□□ 1.46
RNF40-205ENST00000563909 PLEKHH1Q9ULM0 1364 aa24.15■■□□□ 1.46
RNF40-205ENST00000563909 CAMKK2Q96RR4 588 aa24.14■■□□□ 1.45
RNF40-205ENST00000563909 FMN2Q9NZ56 1722 aa24.13■■□□□ 1.45
RNF40-205ENST00000563909 TECPR2O15040 1411 aa24.12■■□□□ 1.45
RNF40-205ENST00000563909 DCAF8L1A6NGE4 600 aa24.12■■□□□ 1.45
RNF40-205ENST00000563909 SBNO1A3KN83 1393 aa24.11■■□□□ 1.45
RNF40-205ENST00000563909 ARHGEF10O15013 1369 aa24.11■■□□□ 1.45
RNF40-205ENST00000563909 TRIM37O94972 964 aa24.1■■□□□ 1.45
RNF40-205ENST00000563909 PPLO60437 1756 aa24.1■■□□□ 1.45
RNF40-205ENST00000563909 TNS1Q9HBL0 1735 aaKnown RBP24.1■■□□□ 1.45
RNF40-205ENST00000563909 TMEM132EQ6IEE7 984 aa24.09■■□□□ 1.45
RNF40-205ENST00000563909 PPP1R1BQ9UD71 204 aaPredicted RBP24.09■■□□□ 1.45
RNF40-205ENST00000563909 ABCA3Q99758 1704 aa24.09■■□□□ 1.45
RNF40-205ENST00000563909 ABCC11Q96J66 1382 aa24.08■■□□□ 1.45
RNF40-205ENST00000563909 NRAPQ86VF7 1730 aa24.08■■□□□ 1.45
RNF40-205ENST00000563909 SPATA31A5Q5VU36 1347 aa24.08■■□□□ 1.44
RNF40-205ENST00000563909 SPATA31A7Q8IWB4 1347 aa24.08■■□□□ 1.44
RNF40-205ENST00000563909 ADGRF5Q8IZF2 1346 aa24.08■■□□□ 1.44
RNF40-205ENST00000563909 APBA3O96018 575 aa24.07■■□□□ 1.44
RNF40-205ENST00000563909 FAM196AQ6ZSG2 479 aa24.05■■□□□ 1.44
RNF40-205ENST00000563909 PARD3Q8TEW0 1356 aa24.04■■□□□ 1.44
RNF40-205ENST00000563909 ADGRB2O60241 1585 aa24.03■■□□□ 1.44
RNF40-205ENST00000563909 NBPF8Q3BBV2 869 aa24.03■■□□□ 1.44
RNF40-205ENST00000563909 NBPF14Q5TI25 921 aa24.03■■□□□ 1.44
RNF40-205ENST00000563909 RGPD8O14715 1765 aaPredicted RBP24.03■■□□□ 1.44
RNF40-205ENST00000563909 NRXN1Q9ULB1 1477 aa24.02■■□□□ 1.44
RNF40-205ENST00000563909 SPON1Q9HCB6 807 aa24.02■■□□□ 1.44
RNF40-205ENST00000563909 THSD7AQ9UPZ6 1657 aa24.01■■□□□ 1.43
RNF40-205ENST00000563909 PMFBP1Q8TBY8 1022 aa24■■□□□ 1.43
RNF40-205ENST00000563909 COL14A1Q05707 1796 aaKnown RBP24■■□□□ 1.43
RNF40-205ENST00000563909 RRBP1Q9P2E9 1410 aaKnown RBP24■■□□□ 1.43
RNF40-205ENST00000563909 KCNQ2O43526 872 aa23.98■■□□□ 1.43
RNF40-205ENST00000563909 RGL3Q3MIN7 710 aa23.98■■□□□ 1.43
RNF40-205ENST00000563909 NINLQ9Y2I6 1382 aa23.98■■□□□ 1.43
RNF40-205ENST00000563909 KNDC1Q76NI1 1749 aa23.98■■□□□ 1.43
RNF40-205ENST00000563909 YTHDC2Q9H6S0 1430 aaKnown RBP23.97■■□□□ 1.43
RNF40-205ENST00000563909 IFT172Q9UG01 1749 aa23.97■■□□□ 1.43
RNF40-205ENST00000563909 SIRT1Q96EB6 747 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms